TomoSeq data search

Data search

Results for MligTC455_41513

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41513

118

2.46

Mlig455_036059, Mlig455_054097

Neo: -

Age: -

Region-enriched R2: 4.413/0.00353
Region-enriched R5: 3.488/0.00024

Mlig455_036059 {REF} {Length: 647} {RNA1310_36899.1} {RNA815_18218}

Mlig455_054097 {REF} {Length: 1012} {RNA1310_36899.1} {RNA815_18218}

Cumulative graph for MligTC455_41513

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.82	2.128	1.00000	1.00000
RegionR2	4.413	2.128	0.00008	0.00353
RegionR3	-3.745	2.128	1.00000	1.00000
RegionR4	-0.903	2.128	0.79612	1.00000
RegionR5	3.488	2.128	0.00001	0.00024
RegionR6	0.803	2.128	0.34368	0.93066
RegionR7	2.855	2.128	0.02432	0.29194
RegionR8	-3.092	2.128	0.99963	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.504	2.128	0.99999	1.00000
RegenerationR2	-0.28	2.128	0.63286	0.92851
RegenerationR3	3.098	2.128	0.06167	0.42046
RegenerationR4	0.929	2.128	0.34948	0.78020
RegenerationR5	-0.709	2.128	0.28444	0.71273
RegenerationR6	0.086	2.128	0.94160	1.00000
RegenerationBL	2.88	2.128	0.03478	0.20972
RegenerationTP	3.23	2.128	0.07679	0.44297

Genes with expression patterns similar to MligTC455_41513

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41513	118	2.46	Mlig455_036059, Mlig455_054097	Neo: - Age: - Region-enriched R2: 4.413/0.00353 Region-enriched R5: 3.488/0.00024		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036059 {REF} {Length: 647} {RNA1310_36899.1} {RNA815_18218} Mlig455_054097 {REF} {Length: 1012} {RNA1310_36899.1} {RNA815_18218}
2.	MligTC455_05325	71	1.48	Mlig455_053845	Neo: - Age: - Region-enriched R2: 9.011/0.00001 Region-enriched R5: 5.683/0.00001	PDE1C	2.514	0.956	0.759	-	-	-	0.799	Mlig455_053845 {REF} {Length: 3417} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.5]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=92.1]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [RH, Score=533, Expect=2e-177]} {Mouse: ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [RH, Score=539, Expect=5e-180]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=533, Expect=2e-175]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [RH, Score=477, Expect=2e-157]} {Smed: dd_Smed_v6_11039_0_2, dd_Smed_v6_11039_0_2, [RH, Score=597, Expect=0.0]} {RNA1509_35042} {RNA1310_15340} {RNA815_34103}
3.	MligTC455_16248	132	2.74	Mlig455_038325, Mlig455_050222, Mlig455_050231	Neo: - Age: -	CHRNA3	1.857	-	-	0.903	0.954	-	-	Mlig455_038325 {REF} {Length: 1078} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=200.0]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=192, Expect=4e-57]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=194, Expect=7e-58]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=190, Expect=1e-56]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=206, Expect=1e-62]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=186, Expect=4e-55]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=216, Expect=5e-67]} {RNA1310_44575} {RNA815_22042} Mlig455_050222 {REF} {Length: 2164} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=202.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=197.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=348, Expect=5e-114]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=335, Expect=4e-109]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=348, Expect=2e-114]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=343, Expect=2e-112]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=335, Expect=5e-109]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=397, Expect=1e-133]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=338, Expect=2e-110]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=489, Expect=5e-170]} {RNA1310_44575} {RNA815_22042} Mlig455_050231 {REF} {Length: 2219} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=203.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=143.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=304, Expect=5e-99]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=299, Expect=8e-97]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=293, Expect=2e-94]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=290, Expect=7e-92]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=302, Expect=3e-98]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=296, Expect=3e-96]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=291, Expect=5e-94]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=352, Expect=8e-117]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=303, Expect=5e-99]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=424, Expect=2e-146]} {RNA1310_44575} {RNA815_22042}
4.	MligTC455_46837	112	2.33	Mlig455_025989	Neo: - Age: Down-Up-Up	FANK1	1.809	-	-	0.951	-	0.858	-	Mlig455_025989 {REF} {Length: 3471} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=112.5]; Ankyrin repeat [PF00023.32, score=88.9]; Ankyrin repeats (many copies) [PF13857.8, score=84.4]; Ankyrin repeats (many copies) [PF13637.8, score=69.4]; Ankyrin repeat [PF13606.8, score=67.7]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [RH, Score=183, Expect=7e-55]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [RH, Score=171, Expect=3e-50]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=87.4, Expect=2e-18]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=81.6, Expect=8e-17]} {Smed: dd_Smed_v6_7571_0_2, dd_Smed_v6_7571_0_2, [RH, Score=254, Expect=8e-83]} {RNA1509_56411} {RNA1310_27639} {RNA815_23901}
5.	MligTC455_40552	2699	56.24	Mlig455_069563	Neo: - Age: logFC(26M/2M)=-0.370 Region-enriched R8: 2.123/0.00000 Region-enriched R2: 1.620/0.00041 Region-enriched R7: 1.568/0.00015 Regeneration-downregulated BL: -1.946 Regeneration-depleted BL: -1.946		1.738	-	-	0.782	0.956	-	-	Mlig455_069563 {REF} {Length: 991} {RNA1509_15221, RNA1509_20766, RNA1509_20891} {RNA1310_40329, RNA1509_15221, RNA1509_20766, RNA1509_20891} {RNA1509_15221, RNA1509_20766, RNA1509_20891, RNA815_19163}
6.	MligTC455_17245	52	1.09	Mlig455_045215	Neo: - Age: Down-Up-Down		1.693	-	-	0.725	0.968	-	-	Mlig455_045215 {REF} {Length: 1291} {Pfam: F5/8 type C domain [PF00754.27, score=22.9]} {RNA1509_36923} {RNA1310_35658} {RNA815_46836}
7.	MligTC455_08318	24	0.51	Mlig455_009766, Mlig455_054914	Neo: - Age: -		0.979	-	-	-	-	-	0.979	Mlig455_009766 {REF} {Length: 3397} {Pfam: Anti-sigma-K factor rskA [PF10099.11, score=19.7]} {RNA1310_31279} {RNA815_38598} Mlig455_054914 {REF} {Length: 3745} {Pfam: Anti-sigma-K factor rskA [PF10099.11, score=18.9]} {RNA1310_31279} {RNA815_38598}
8.	MligTC455_15002	190	3.95	Mlig455_007215, Mlig455_007224	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.790	HSPA5	0.97	-	-	-	-	-	0.970	Mlig455_007215 {REF} {Length: 2828} {Pfam: Hsp70 protein [PF00012.22, score=879.8]; MreB/Mbl protein [PF06723.15, score=67.4]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=18.4]} {Human: ENSG00000044574, HSPA5, heat shock protein family A (Hsp70) member 5, [RH, Score=1034, Expect=0.0]} {Mouse: ENSMUSG00000026864, Hspa5, heat shock protein 5, [RH, Score=1032, Expect=0.0]} {Dmel: FBgn0001218, Hsc70-3, Heat shock 70-kDa protein cognate 3, [RH, Score=982, Expect=0.0]} {Celegans: WBGene00002007, hsp-3, Heat shock 70 kDa protein C, [RH, Score=1001, Expect=0.0]} {Smed: dd_Smed_v6_2648_0_1, dd_Smed_v6_2648_0_1, [Score=883, Expect=0.0]} {RNA1509_45546} {RNA1310_10095} {RNA815_1200.1} Mlig455_007224 {REF} {Length: 2767} {Pfam: Hsp70 protein [PF00012.22, score=502.8]; MreB/Mbl protein [PF06723.15, score=58.8]; Hydantoinase/oxoprolinase [PF01968.20, score=18.2]} {Human: ENSG00000044574, HSPA5, heat shock protein family A (Hsp70) member 5, [Score=576, Expect=0.0]} {Mouse: ENSMUSG00000026864, Hspa5, heat shock protein 5, [Score=575, Expect=0.0]} {Dmel: FBgn0001218, Hsc70-3, Heat shock 70-kDa protein cognate 3, [Score=529, Expect=0.0]} {Celegans: WBGene00002008, hsp-4, Heat shock 70 kDa protein D, [Score=555, Expect=0.0]} {Smed: dd_Smed_v6_2648_0_1, dd_Smed_v6_2648_0_1, [Score=487, Expect=2e-168]} {RNA1509_45546} {RNA1310_10095} {RNA815_1200.1}
9.	MligTC455_53435	190	3.96	Mlig455_045425, Mlig455_065748	Neo: - Age: - Region-enriched R2: 4.111/0.00023	SYT9	0.961	-	-	-	0.961	-	-	Mlig455_045425 {REF} {Length: 2615} {RNA1509_46689} {RNA1310_15031, RNA1509_46689} {RNA1509_46689, RNA815_18779.1} Mlig455_065748 {REF} {Length: 3143} {Pfam: C2 domain [PF00168.32, score=116.1]} {Human: ENSG00000170743, SYT9, synaptotagmin 9, [Score=162, Expect=4e-42]; ENSG00000213023, SYT3, synaptotagmin 3, [Score=157, Expect=5e-40]} {Mouse: ENSMUSG00000062542, Syt9, synaptotagmin IX, [Score=162, Expect=3e-42]; ENSMUSG00000030731, Syt3, synaptotagmin III, [Score=156, Expect=1e-39]} {Dmel: FBgn0261089, Sytalpha, Synaptotagmin alpha, [RH, Score=197, Expect=1e-54]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=144, Expect=8e-37]} {Smed: dd_Smed_v6_6730_0_1, dd_Smed_v6_6730_0_1, [Score=155, Expect=5e-41]} {RNA1509_46689} {RNA1310_15031} {RNA815_18779.1}
10.	MligTC455_23828	57	1.18	Mlig455_026697	Neo: - Age: -		0.96	-	-	-	0.960	-	-	Mlig455_026697 {REF} {Length: 468} {NoTransDecoderORF}
11.	MligTC455_36566	40	0.83	Mlig455_053263	Neo: - Age: - Region-enriched R2: 4.823/0.01830		0.958	-	-	-	0.958	-	-	Mlig455_053263 {REF} {Length: 1228} {TRANSSPLICED} {RNA1310_99871}
12.	MligTC455_43560	18	0.37	Mlig455_061120	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_061120 {REF} {Length: 1849} {TRANSSPLICED} {RNA1509_8850} {RNA1310_6911} {RNA815_1680}
13.	MligTC455_01656	16	0.33	Mlig455_040666	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_040666 {REF} {Length: 985} {RNA1509_48613} {RNA1310_29425} {RNA815_35012}
14.	MligTC455_13612	95	1.98	Mlig455_060964	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_060964 {REF} {Length: 2501} {Pfam: NPH3 family [PF03000.16, score=44.6]; BTB/POZ domain [PF00651.33, score=25.4]} {Smed: dd_Smed_v6_8081_0_1, dd_Smed_v6_8081_0_1, [Score=160, Expect=4e-42]} {RNA1310_11638} {RNA815_12936}

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