M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_41606

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41606 1785 37.19 Mlig455_056772

Neo: -

Age: Down-Up-Up

 Mlig455_056772 {REF} {Length: 5305} {Pfam: Death domain [PF00531.24, score=41.1]} {Smed: dd_Smed_v6_11696_0_1, dd_Smed_v6_11696_0_1, [RH, Score=144, Expect=4e-41]} {RNA1509_15504} {RNA1310_21989.1} {RNA815_10131.1}

Cumulative graph for MligTC455_41606

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.939 5.354 0.20587 0.84489
RegionR2 0.28 5.354 0.36452 0.75895
RegionR3 0.499 5.354 0.04987 0.38999
RegionR4 0.352 5.354 0.24971 0.54896
RegionR5 0.027 5.354 0.91696 1.00000
RegionR6 0.072 5.354 0.79328 1.00000
RegionR7 0.152 5.354 0.64900 1.00000
RegionR8 -0.443 5.354 0.32980 0.96281

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.102 5.354 0.37148 1.00000
RegenerationR2 0.352 5.354 0.17544 0.61596
RegenerationR3 -0.064 5.354 0.82057 0.98783
RegenerationR4 0.225 5.354 0.44828 0.84083
RegenerationR5 -0.085 5.354 0.76320 0.97646
RegenerationR6 0.178 5.354 0.55211 0.84020
RegenerationBL 0.319 5.354 0.32615 0.69280
RegenerationTP -0.065 5.354 0.86668 1.00000


Genes with expression patterns similar to MligTC455_41606

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41606 1785 37.19 Mlig455_056772

Neo: -

Age: Down-Up-Up

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_056772 {REF} {Length: 5305} {Pfam: Death domain [PF00531.24, score=41.1]} {Smed: dd_Smed_v6_11696_0_1, dd_Smed_v6_11696_0_1, [RH, Score=144, Expect=4e-41]} {RNA1509_15504} {RNA1310_21989.1} {RNA815_10131.1}
2. MligTC455_17091 2911 60.64 Mlig455_028197, Mlig455_063562

Neo: -

Age: logFC(26M/2M)=-0.227

 CCDC146 3.245 0.847 0.706 - - 0.741 0.951

Mlig455_028197 {REF} {Length: 3903} {Human: ENSG00000135205, CCDC146, coiled-coil domain containing 146, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000064280, Ccdc146, coiled-coil domain containing 146, [RH, Score=577, Expect=0.0]} {Smed: dd_Smed_v6_6858_0_1, dd_Smed_v6_6858_0_1, [RH, Score=629, Expect=0.0]} {RNA1509_812} {RNA1310_3064} {RNA815_893}

Mlig455_063562 {REF} {Length: 3903} {Human: ENSG00000135205, CCDC146, coiled-coil domain containing 146, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000064280, Ccdc146, coiled-coil domain containing 146, [RH, Score=577, Expect=0.0]} {Smed: dd_Smed_v6_6858_0_1, dd_Smed_v6_6858_0_1, [RH, Score=629, Expect=0.0]} {RNA1509_20071, RNA1509_812} {RNA1310_3064, RNA1509_20071, RNA1509_812} {RNA1509_20071, RNA1509_812, RNA815_893}
3. MligTC455_43402 2609 54.34 Mlig455_002042, Mlig455_002237

Neo: -

Age: -

Region-enriched R4: 1.264/0.00070

 B9D2 2.728 - - 0.904 - 0.863 0.961

Mlig455_002042 {REF} {Length: 1183} {TRANSSPLICED} {Pfam: Ciliary basal body-associated, B9 protein [PF07162.13, score=179.8]} {Human: ENSG00000123810, B9D2, B9 domain containing 2, [RH, Score=230, Expect=1e-77]} {Mouse: ENSMUSG00000063439, B9d2, B9 protein domain 2, [RH, Score=226, Expect=4e-76]} {Dmel: FBgn0261683, B9d2, [RH, Score=153, Expect=1e-47]} {Celegans: WBGene00021416, mksr-2, MecKel Syndrome 1 (MKS1)-Related, [RH, Score=164, Expect=6e-52]} {Smed: dd_Smed_v6_7362_0_1, dd_Smed_v6_7362_0_1, [RH, Score=229, Expect=7e-78]} {RNA1509_13073, RNA1509_22873} {RNA1310_29052, RNA1509_13073} {RNA1509_13073, RNA815_13616}

Mlig455_002237 {REF} {Length: 1183} {TRANSSPLICED} {Pfam: Ciliary basal body-associated, B9 protein [PF07162.13, score=179.8]} {Human: ENSG00000123810, B9D2, B9 domain containing 2, [RH, Score=230, Expect=1e-77]} {Mouse: ENSMUSG00000063439, B9d2, B9 protein domain 2, [RH, Score=226, Expect=4e-76]} {Dmel: FBgn0261683, B9d2, [RH, Score=153, Expect=1e-47]} {Celegans: WBGene00021416, mksr-2, MecKel Syndrome 1 (MKS1)-Related, [RH, Score=164, Expect=6e-52]} {Smed: dd_Smed_v6_7362_0_1, dd_Smed_v6_7362_0_1, [RH, Score=229, Expect=7e-78]} {RNA1509_22873} {RNA1310_29052, RNA1509_22873} {RNA1509_22873, RNA815_13616}
4. MligTC455_07848 718 14.95 Mlig455_070235

Neo: -

Age: -

 LCK 2.545 - - 0.960 - 0.852 0.733 Mlig455_070235 {REF} {Length: 2482} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=288.1]; Protein kinase domain [PF00069.27, score=161.5]; SH3 domain [PF00018.30, score=50.6]; SH2 domain [PF00017.26, score=46.4]; Variant SH3 domain [PF07653.19, score=34.2]; Variant SH3 domain [PF14604.8, score=29.7]; ABC1 atypical kinase-like domain [PF03109.18, score=25.0]; Haspin like kinase domain [PF12330.10, score=20.3]} {Human: ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=374, Expect=5e-124]; ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=371, Expect=3e-122]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=369, Expect=8e-122]; ENSG00000176105, YES1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=365, Expect=6e-120]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=360, Expect=3e-118]; ENSG00000254087, LYN, LYN proto-oncogene, Src family tyrosine kinase, [Score=360, Expect=9e-119]; ENSG00000136573, BLK, BLK proto-oncogene, Src family tyrosine kinase, [Score=357, Expect=2e-117]} {Mouse: ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=375, Expect=3e-124]; ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=371, Expect=2e-122]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=365, Expect=5e-120]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=363, Expect=6e-120]; ENSMUSG00000003283, Hck, hemopoietic cell kinase, [Score=362, Expect=2e-119]; ENSMUSG00000027646, Src, Rous sarcoma oncogene, [Score=360, Expect=5e-118]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=389, Expect=8e-130]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=385, Expect=5e-129]} {Smed: dd_Smed_v6_3363_0_1, dd_Smed_v6_3363_0_1, [Score=466, Expect=2e-160]} {RNA1509_21410, RNA1509_27796, RNA1509_54196} {RNA1310_9777, RNA1509_21410, RNA1509_27796, RNA1509_54196} {RNA1509_21410, RNA1509_27796, RNA1509_54196, RNA815_3276.1}
5. MligTC455_52993 2784 58.01 Mlig455_026924

Neo: -

Age: -

Region-enriched R4: 1.003/0.00472

 2.535 0.798 - - - 0.772 0.965 Mlig455_026924 {REF} {Length: 827} {TRANSSPLICED} {Smed: dd_Smed_v6_8079_0_1, dd_Smed_v6_8079_0_1, [RH, Score=190, Expect=1e-62]} {RNA1509_10405} {RNA1310_42303.1} {RNA815_21489}
6. MligTC455_46132 2808 58.5 Mlig455_019688

Neo: -

Age: logFC(26M/2M)=-0.242

 RSPH4A 2.466 - 0.739 0.769 - - 0.958 Mlig455_019688 {REF} {Length: 3328} {TRANSSPLICED} {Pfam: Radial spokehead-like protein [PF04712.14, score=618.0]} {Human: ENSG00000111834, RSPH4A, radial spoke head component 4A, [RH, Score=466, Expect=7e-157]} {Mouse: ENSMUSG00000039552, Rsph4a, radial spoke head 4 homolog A (Chlamydomonas), [RH, Score=483, Expect=8e-164]} {Dmel: FBgn0034957, CG3121, [RH, Score=217, Expect=5e-62]} {Smed: dd_Smed_v6_3854_0_1, dd_Smed_v6_3854_0_1, [RH, Score=437, Expect=4e-148]} {RNA1509_3124} {RNA1310_12908, RNA1509_3124} {RNA1509_3124, RNA815_4463.1}
7. MligTC455_44296 2347 48.89 Mlig455_065582

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.420

Region-enriched R4: 1.113/0.02092

 SPATA6L 2.442 - - - 0.718 0.955 0.769 Mlig455_065582 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=110.8]} {Human: ENSG00000106686, SPATA6L, spermatogenesis associated 6 like, [Score=77.8, Expect=2e-15]} {Mouse: ENSMUSG00000064202, 4430402I18Rik, RIKEN cDNA 4430402I18 gene, [Score=78.6, Expect=1e-15]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [Score=169, Expect=4e-49]} {RNA1509_29197, RNA1509_4644} {RNA1310_14692, RNA1509_29197, RNA1509_4644} {RNA1509_29197, RNA1509_4644, RNA815_9592}
8. MligTC455_43766 2863 59.66 Mlig455_001907

Neo: -

Age: logFC(26M/2M)=-0.394

 EFHB 1.825 - - - - 0.860 0.965 Mlig455_001907 {REF} {Length: 2219} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=45.4]; EF hand [PF00036.34, score=42.6]; EF-hand domain [PF13405.8, score=40.6]; Family of unknown function (DUF5580) [PF17743.3, score=32.4]; EF hand [PF13202.8, score=31.5]; EF-hand domain pair [PF13833.8, score=19.0]} {Human: ENSG00000163576, EFHB, EF-hand domain family member B, [Score=361, Expect=9e-117]} {Mouse: ENSMUSG00000023931, Efhb, EF hand domain family, member B, [Score=332, Expect=2e-104]} {Dmel: FBgn0004910, Eip63F-1, Ecdysone-induced protein 63F 1, [Score=53.5, Expect=6e-08]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=52.4, Expect=8e-08]} {Smed: dd_Smed_v6_11909_0_1, dd_Smed_v6_11909_0_1, [Score=325, Expect=5e-105]} {RNA1509_2205} {RNA1310_7693, RNA1509_2205} {RNA1509_2205, RNA815_3913}
9. MligTC455_43225 1135 23.64 Mlig455_028905

Neo: -

Age: Down-Up-Up

 GRM3 1.792 - - - - 0.836 0.956 Mlig455_028905 {REF} {Length: 3858} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=107.1]; Receptor family ligand binding region [PF01094.30, score=53.1]} {Human: ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [Score=121, Expect=1e-27]} {Mouse: ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [Score=122, Expect=8e-28]} {Dmel: FBgn0050361, mtt, mangetout, [Score=131, Expect=9e-31]} {Celegans: WBGene00003233, mgl-2, Metabotropic GLutamate receptor family, [Score=64.3, Expect=3e-10]} {Smed: dd_Smed_v6_32826_0_1, dd_Smed_v6_32826_0_1, [Score=66.6, Expect=4e-11]} {RNA1509_36690, RNA1509_57807, RNA1509_8888} {RNA1310_2635, RNA1509_36690, RNA1509_57807, RNA1509_8888} {RNA1509_36690, RNA1509_57807, RNA1509_8888, RNA815_904}
10. MligTC455_22713 787 16.4 Mlig455_023280

Neo: -

Age: -

 1.764 - - - - 0.991 0.773 Mlig455_023280 {REF} {Length: 2898} {RNA1509_17376} {RNA1310_6954} {RNA815_8376.1}
11. MligTC455_49457 1225 25.52 Mlig455_005617, Mlig455_014432, Mlig455_070181

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.375

 1.761 - - - - 0.952 0.809

Mlig455_005617 {REF} {Length: 1304} {RNA1509_48463} {RNA1310_46663, RNA1509_48463} {RNA1509_48463, RNA815_4404.1}

Mlig455_014432 {REF} {Length: 1338} {RNA1509_48463} {RNA1310_46663} {RNA815_4404.1}

Mlig455_070181 {REF} {Length: 1176} {RNA1509_47545, RNA1509_48463} {RNA1310_46663, RNA1509_47545} {RNA1509_47545, RNA815_4404.1}
12. MligTC455_19623 1203 25.06 Mlig455_036306

Neo: -

Age: Down-Up-Up

Region-enriched R2: 1.091/0.03774

 CFAP126 1.753 - - - - 0.802 0.951 Mlig455_036306 {REF} {Length: 2572} {Human: ENSG00000188931, CFAP126, cilia and flagella associated protein 126, [RH, Score=84.0, Expect=4e-20]} {Mouse: ENSMUSG00000026649, Cfap126, cilia and flagella associated protein 126, [RH, Score=78.2, Expect=6e-18]} {Smed: dd_Smed_v6_2157_0_1, dd_Smed_v6_2157_0_1, [RH, Score=98.2, Expect=5e-26]} {RNA1509_2614, RNA1509_50597} {RNA1310_17639.1, RNA1509_50597} {RNA1509_50597, RNA815_13460}
13. MligTC455_27391 400 8.33 Mlig455_025302

Neo: -

Age: -

 1.724 - - - - 0.958 0.766 Mlig455_025302 {REF} {Length: 5004} {RNA1509_12762} {RNA1310_3434.1} {RNA815_1693}
14. MligTC455_33106 458 9.53 Mlig455_010260

Neo: -

Age: -

 DYRK2 1.685 - - - - 0.952 0.733 Mlig455_010260 {REF} {Length: 4138} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=195.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=81.1]; ABC1 atypical kinase-like domain [PF03109.18, score=27.3]; Phosphotransferase enzyme family [PF01636.25, score=21.3]} {Human: ENSG00000127334, DYRK2, dual specificity tyrosine phosphorylation regulated kinase 2, [RH, Score=649, Expect=0.0]} {Mouse: ENSMUSG00000028630, Dyrk2, dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2, [RH, Score=649, Expect=0.0]} {Dmel: FBgn0027101, Dyrk3, Dual-specificity tyrosine phosphorylation-regulated kinase 3, [RH, Score=569, Expect=0.0]} {Celegans: WBGene00003150, mbk-2, Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2, [RH, Score=587, Expect=0.0]} {Smed: dd_Smed_v6_10966_0_1, dd_Smed_v6_10966_0_1, [RH, Score=630, Expect=0.0]} {RNA1509_6870} {RNA1310_14641} {RNA815_4815}
15. MligTC455_15348 2587 53.89 Mlig455_026551

Neo: -

Age: logFC(26M/2M)=-0.294

 1.675 - - 0.716 - - 0.959 Mlig455_026551 {REF} {Length: 3722} {Pfam: EF-hand domain [PF13405.8, score=70.8]; EF-hand domain pair [PF13499.8, score=53.5]; EF hand [PF00036.34, score=48.9]; EF-hand domain pair [PF13833.8, score=33.6]; EF-hand domain [PF08976.13, score=21.7]} {Dmel: FBgn0038163, CG10841, [RH, Score=206, Expect=1e-55]} {Smed: dd_Smed_v6_8441_0_1, dd_Smed_v6_8441_0_1, [RH, Score=832, Expect=0.0]} {RNA1509_14360, RNA1509_30221, RNA1509_4624, RNA1509_7135} {RNA1310_4455, RNA1509_14360, RNA1509_30221, RNA1509_4624, RNA1509_7135} {RNA1509_14360, RNA1509_30221, RNA1509_4624, RNA1509_7135, RNA815_1290}
16. MligTC455_43317 3611 75.23 Mlig455_060211, Mlig455_070472

Neo: -

Age: Down-Down-Up

 C10orf53 0.963 - - - - - 0.963

Mlig455_060211 {REF} {Length: 460} {TRANSSPLICED} {Pfam: Uncharacterised protein family UPF0728 [PF15092.8, score=94.5]} {Human: ENSG00000178645, C10orf53, chromosome 10 open reading frame 53, [RH, Score=87.4, Expect=1e-23]} {Mouse: ENSMUSG00000072473, 1700024G13Rik, RIKEN cDNA 1700024G13 gene, [RH, Score=90.1, Expect=6e-25]} {Smed: dd_Smed_v6_10501_0_1, dd_Smed_v6_10501_0_1, [RH, Score=79.7, Expect=3e-21]} {RNA1509_5492} {RNA1310_40240} {RNA815_43806}

Mlig455_070472 {REF} {Length: 868} {TRANSSPLICED} {Pfam: Uncharacterised protein family UPF0728 [PF15092.8, score=94.6]} {Human: ENSG00000178645, C10orf53, chromosome 10 open reading frame 53, [RH, Score=87.8, Expect=8e-24]} {Mouse: ENSMUSG00000072473, 1700024G13Rik, RIKEN cDNA 1700024G13 gene, [RH, Score=90.5, Expect=5e-25]} {Smed: dd_Smed_v6_10501_0_1, dd_Smed_v6_10501_0_1, [RH, Score=79.7, Expect=3e-21]} {RNA1509_26385, RNA1509_5492} {RNA1310_40240, RNA1509_26385, RNA1509_5492} {RNA1509_26385, RNA1509_5492, RNA815_43806}
17. MligTC455_20070 2764 57.59 Mlig455_018898, Mlig455_064935

Neo: -

Age: logFC(26M/2M)=-0.311

 AXDND1 0.962 - - - - - 0.962

Mlig455_018898 {REF} {Length: 3733} {TRANSSPLICED} {Pfam: Axonemal dynein light chain [PF10211.11, score=41.1]} {Human: ENSG00000162779, AXDND1, axonemal dynein light chain domain containing 1, [RH, Score=406, Expect=5e-124]} {Mouse: ENSMUSG00000026601, Axdnd1, axonemal dynein light chain domain containing 1, [RH, Score=401, Expect=1e-121]} {Smed: dd_Smed_v6_17219_0_1, dd_Smed_v6_17219_0_1, [RH, Score=436, Expect=1e-135]} {RNA1509_4031} {RNA1310_3220.1} {RNA815_882.1}

Mlig455_064935 {REF} {Length: 3676} {TRANSSPLICED} {Pfam: Axonemal dynein light chain [PF10211.11, score=39.8]} {Human: ENSG00000162779, AXDND1, axonemal dynein light chain domain containing 1, [RH, Score=417, Expect=2e-128]} {Mouse: ENSMUSG00000026601, Axdnd1, axonemal dynein light chain domain containing 1, [RH, Score=410, Expect=4e-125]} {Smed: dd_Smed_v6_17219_0_1, dd_Smed_v6_17219_0_1, [RH, Score=440, Expect=3e-137]} {RNA1509_12971, RNA1509_51405} {RNA1310_3220.1, RNA1509_51405} {RNA1509_51405, RNA815_882.1}
18. MligTC455_52899 91 1.9 Mlig455_003479

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_003479 {REF} {Length: 1947} {Pfam: Autophagy-related protein 27 [PF09451.12, score=65.7]; Mannose-6-phosphate receptor [PF02157.17, score=47.0]; Cation-independent mannose-6-phosphate receptor repeat [PF00878.20, score=18.9]} {Smed: dd_Smed_v6_1447_0_1, dd_Smed_v6_1447_0_1, [RH, Score=114, Expect=2e-30]} {RNA1509_20552} {RNA1310_31940} {RNA815_14758}
19. MligTC455_45809 600 12.5 Mlig455_067476

Neo: -

Age: Down-Up-Down

 GNB1 0.961 - - - - 0.961 - Mlig455_067476 {REF} {Length: 2452} {Pfam: WD domain, G-beta repeat [PF00400.34, score=114.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.6]} {Human: ENSG00000078369, GNB1, G protein subunit beta 1, [Score=339, Expect=2e-115]; ENSG00000172354, GNB2, G protein subunit beta 2, [Score=339, Expect=2e-115]; ENSG00000114450, GNB4, G protein subunit beta 4, [Score=338, Expect=4e-115]; ENSG00000111664, GNB3, G protein subunit beta 3, [Score=327, Expect=1e-110]} {Mouse: ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [Score=339, Expect=1e-115]; ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [Score=339, Expect=1e-115]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [Score=328, Expect=3e-111]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [Score=325, Expect=3e-110]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [Score=350, Expect=5e-120]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [Score=345, Expect=2e-118]} {Smed: dd_Smed_v6_2872_0_1, dd_Smed_v6_2872_0_1, [RH, Score=378, Expect=4e-131]} {RNA1509_43184, RNA1509_4807} {RNA1310_7323, RNA1509_43184} {RNA1509_43184, RNA815_2947}
20. MligTC455_38136 2459 51.22 Mlig455_015043

Neo: -

Age: -

Region-enriched R4: 1.060/0.04586

 TCTEX1D1 0.959 - - - - - 0.959 Mlig455_015043 {REF} {Length: 905} {Pfam: Tctex-1 family [PF03645.15, score=71.9]} {Human: ENSG00000152760, TCTEX1D1, Tctex1 domain containing 1, [Score=76.3, Expect=2e-17]; ENSG00000213123, TCTEX1D2, Tctex1 domain containing 2, [Score=73.9, Expect=8e-17]} {Mouse: ENSMUSG00000028523, Tctex1d1, Tctex1 domain containing 1, [Score=88.6, Expect=2e-22]} {Dmel: FBgn0037773, CG5359, [Score=50.1, Expect=7e-08]} {Smed: dd_Smed_v6_9321_0_2, dd_Smed_v6_9321_0_2, [Score=77.8, Expect=2e-18]} {RNA1509_11271, RNA1509_7075} {RNA1310_45569, RNA1509_11271} {RNA1509_11271, RNA815_23689}
21. MligTC455_38072 222 4.62 Mlig455_012098, Mlig455_023289, Mlig455_023290, Mlig455_030139

Neo: -

Age: -

 0.957 - - - - 0.957 -

Mlig455_012098 {REF} {Length: 3878} {NoTransDecoderORF} {RNA1509_44389} {RNA1310_14765.2} {RNA815_7155}

Mlig455_023289 {REF} {Length: 239} {NoTransDecoderORF} {RNA1509_57501} {RNA1310_60087} {RNA815_63886}

Mlig455_023290 {REF} {Length: 660} {RNA1509_44389} {RNA1310_27455} {RNA815_10592}

Mlig455_030139 {REF} {Length: 465} {NoTransDecoderORF} {RNA1509_44389} {RNA1310_14765.2} {RNA815_7155}
22. MligTC455_31470 1339 27.91 Mlig455_002685

Neo: -

Age: logFC(26M/2M)=-0.799

 CCDC189 0.956 - - - - - 0.956 Mlig455_002685 {REF} {Length: 1248} {Pfam: Flagellar C1a complex subunit C1a-32 [PF14769.8, score=115.2]} {Human: ENSG00000196118, CCDC189, coiled-coil domain containing 189, [RH, Score=129, Expect=1e-34]} {Mouse: ENSMUSG00000057176, Ccdc189, coiled-coil domain containing 189, [Score=133, Expect=3e-36]} {Smed: dd_Smed_v6_12703_0_1, dd_Smed_v6_12703_0_1, [RH, Score=162, Expect=4e-48]} {RNA1509_7747} {RNA1310_28715} {RNA815_12270.1}
23. MligTC455_44663 1108 23.08 Mlig455_046880, Mlig455_063019

Neo: -

Age: -

 RAB28 0.956 - - - - - 0.956

Mlig455_046880 {REF} {Length: 1775} {Pfam: Ras family [PF00071.24, score=144.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=93.9]; ADP-ribosylation factor family [PF00025.23, score=45.5]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.0]} {Human: ENSG00000157869, RAB28, RAB28, member RAS oncogene family, [RH, Score=263, Expect=7e-89]} {Mouse: ENSMUSG00000029128, Rab28, RAB28, member RAS oncogene family, [RH, Score=259, Expect=1e-87]} {Dmel: FBgn0015795, Rab7, [Score=112, Expect=2e-30]} {Celegans: WBGene00004281, rab-28, RAB family, [RH, Score=174, Expect=3e-54]} {Smed: dd_Smed_v6_375_0_1, dd_Smed_v6_375_0_1, [RH, Score=200, Expect=1e-64]} {RNA1509_27391, RNA1509_42040, RNA1509_53680} {RNA1310_10636, RNA1509_27391, RNA1509_42040, RNA1509_53680} {RNA1509_27391, RNA1509_42040, RNA1509_53680, RNA815_12710}

Mlig455_063019 {REF} {Length: 1471} {Pfam: Ras family [PF00071.24, score=145.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=94.7]; ADP-ribosylation factor family [PF00025.23, score=45.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.3]} {Human: ENSG00000157869, RAB28, RAB28, member RAS oncogene family, [RH, Score=252, Expect=3e-85]} {Mouse: ENSMUSG00000029128, Rab28, RAB28, member RAS oncogene family, [RH, Score=249, Expect=2e-84]} {Dmel: FBgn0015795, Rab7, [Score=111, Expect=3e-30]} {Celegans: WBGene00004281, rab-28, RAB family, [RH, Score=172, Expect=1e-53]} {Smed: dd_Smed_v6_375_0_1, dd_Smed_v6_375_0_1, [Score=186, Expect=4e-59]} {RNA1509_42040} {RNA1310_10636} {RNA815_12710}
24. MligTC455_16288 1498 31.21 Mlig455_022347

Neo: -

Age: logFC(26M/2M)=1.093

Region-enriched R3: 1.037/0.02075

 0.955 - - - - - 0.955 Mlig455_022347 {REF} {Length: 838} {NoTransDecoderORF} {RNA1509_37931} {RNA1310_30536, RNA1509_37931} {RNA1509_37931, RNA815_15184.1}
25. MligTC455_16289 2556 53.25 Mlig455_026794, Mlig455_051807

Neo: -

Age: -

Region-enriched R3: 1.005/0.02662

 EFCAB1 0.955 - - - - - 0.955

Mlig455_026794 {REF} {Length: 1239} {Pfam: EF hand [PF00036.34, score=59.9]; EF-hand domain pair [PF13499.8, score=58.5]; EF-hand domain [PF13405.8, score=52.9]; EF-hand domain pair [PF13833.8, score=44.5]; EF hand [PF13202.8, score=43.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=22.4]} {Human: ENSG00000034239, EFCAB1, EF-hand calcium binding domain 1, [RH, Score=192, Expect=2e-61]} {Mouse: ENSMUSG00000068617, Efcab1, EF-hand calcium binding domain 1, [RH, Score=187, Expect=1e-59]} {Dmel: FBgn0029995, CG2256, [RH, Score=166, Expect=2e-50]} {Celegans: WBGene00003565, ncs-3, Neuronal Calcium Sensor family, [Score=72.8, Expect=9e-16]} {Smed: dd_Smed_v6_5488_0_1, dd_Smed_v6_5488_0_1, [RH, Score=245, Expect=1e-82]} {RNA1509_13873} {RNA1310_30536, RNA1509_13873} {RNA1509_13873, RNA815_15184.1}

Mlig455_051807 {REF} {Length: 1079} {Pfam: EF hand [PF00036.34, score=59.9]; EF-hand domain pair [PF13499.8, score=58.5]; EF-hand domain [PF13405.8, score=52.9]; EF-hand domain pair [PF13833.8, score=44.5]; EF hand [PF13202.8, score=43.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=22.4]} {Human: ENSG00000034239, EFCAB1, EF-hand calcium binding domain 1, [RH, Score=192, Expect=2e-61]} {Mouse: ENSMUSG00000068617, Efcab1, EF-hand calcium binding domain 1, [RH, Score=187, Expect=1e-59]} {Dmel: FBgn0029995, CG2256, [RH, Score=166, Expect=2e-50]} {Celegans: WBGene00003565, ncs-3, Neuronal Calcium Sensor family, [Score=72.8, Expect=9e-16]} {Smed: dd_Smed_v6_5488_0_1, dd_Smed_v6_5488_0_1, [RH, Score=245, Expect=1e-82]} {RNA1509_13873} {RNA1310_30536} {RNA815_15184.2}
26. MligTC455_49256 1082 22.55 Mlig455_041198

Neo: -

Age: -

 MORN2 0.952 - - - - - 0.952 Mlig455_041198 {REF} {Length: 1758} {Pfam: MORN repeat [PF02493.22, score=64.6]} {Human: ENSG00000188010, MORN2, MORN repeat containing 2, [RH, Score=124, Expect=1e-36]} {Mouse: ENSMUSG00000045257, Morn2, MORN repeat containing 2, [RH, Score=127, Expect=8e-38]} {Dmel: FBgn0032478, CG5458, [Score=67.4, Expect=9e-14]} {Smed: dd_Smed_v6_6857_0_1, dd_Smed_v6_6857_0_1, [RH, Score=126, Expect=3e-38]} {RNA1509_23877, RNA1509_42709, RNA1509_7559} {RNA1310_23298, RNA1509_23877, RNA1509_7559} {RNA1509_23877, RNA1509_7559, RNA815_18336}
27. MligTC455_45578 1731 36.06 Mlig455_036467

Neo: -

Age: -

 DSP 0.951 - - - - 0.951 - Mlig455_036467 {REF} {Length: 14862} {Pfam: Putative beta-lactamase-inhibitor-like, PepSY-like [PF11396.10, score=73.5]; SH3 domain [PF17902.3, score=47.0]} {Human: ENSG00000096696, DSP, desmoplakin, [Score=54.7, Expect=5e-06]} {Mouse: ENSMUSG00000054889, Dsp, desmoplakin, [Score=53.1, Expect=1e-05]} {Dmel: FBgn0013733, shot, short stop, [Score=78.6, Expect=2e-13]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=68.2, Expect=2e-10]} {Smed: dd_Smed_v6_8220_0_6, dd_Smed_v6_8220_0_6, [Score=162, Expect=4e-39]} {RNA1509_44366, RNA1509_8849, RNA1509_993} {RNA1310_2457.1, RNA1509_44366, RNA1509_993} {RNA1509_44366, RNA1509_993, RNA815_701}
28. MligTC455_50914 714 14.87 Mlig455_005873

Neo: -

Age: -

Region-enriched R2: 2.125/0.01399

 DNHD1 0.951 - - - - - 0.951 Mlig455_005873 {REF} {Length: 14506} {Pfam: Dynein heavy chain, N-terminal region 2 [PF08393.15, score=207.8]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=114.3]; P-loop containing dynein motor region D4 [PF12780.9, score=60.3]; Microtubule-binding stalk of dynein motor [PF12777.9, score=54.5]; P-loop containing dynein motor region [PF12775.9, score=46.5]; Dynein heavy chain C-terminal domain [PF18199.3, score=42.8]; Dynein heavy chain AAA lid domain [PF17852.3, score=38.9]; AAA domain [PF13401.8, score=22.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=22.0]; Protein of unknown function (DUF815) [PF05673.15, score=20.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.7]} {Human: ENSG00000179532, DNHD1, dynein heavy chain domain 1, [Score=159, Expect=1e-37]} {Mouse: ENSMUSG00000030882, Dnhd1, dynein heavy chain domain 1, [Score=177, Expect=3e-43]} {Dmel: FBgn0013811, Dhc62B, Dynein heavy chain at 62B, [Score=114, Expect=4e-24]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=82.0, Expect=1e-14]} {Smed: dd_Smed_v6_8984_0_1, dd_Smed_v6_8984_0_1, [Score=331, Expect=5e-90]} {RNA1509_32900} {RNA1310_31} {RNA815_1203}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA