M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_41737

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41737 23 0.48 Mlig455_052811

Neo: -

Age: -

 Mlig455_052811 {REF} {Length: 1371} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=48.3]; F-box domain [PF00646.35, score=23.4]} {Smed: dd_Smed_v6_4647_0_1, dd_Smed_v6_4647_0_1, [Score=103, Expect=2e-24]} {RNA1509_46531} {RNA1310_25313} {RNA815_8653}

Cumulative graph for MligTC455_41737

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.855 0.816 0.99937 1.00000
RegionR2 2.336 0.816 0.99960 1.00000
RegionR3 0.111 0.816 0.99923 1.00000
RegionR4 -2.305 0.816 1.00000 1.00000
RegionR5 -0.802 0.816 0.99947 1.00000
RegionR6 0.148 0.816 0.99917 1.00000
RegionR7 1.031 0.816 0.99961 1.00000
RegionR8 1.337 0.816 0.99983 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.402 0.816 0.99921 1.00000
RegenerationR2 4.3 0.816 0.04902 0.36589
RegenerationR3 4.571 0.816 0.06316 0.42367
RegenerationR4 3.932 0.816 0.07715 0.44162
RegenerationR5 0.871 0.816 0.99918 1.00000
RegenerationR6 3.371 0.816 0.11186 0.41202
RegenerationBL 5.588 0.816 0.01977 0.15187
RegenerationTP 3.492 0.816 0.16947 0.60230


Genes with expression patterns similar to MligTC455_41737

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41737 23 0.48 Mlig455_052811

Neo: -

Age: -

 2 - - - - 1.000 1.000 Mlig455_052811 {REF} {Length: 1371} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=48.3]; F-box domain [PF00646.35, score=23.4]} {Smed: dd_Smed_v6_4647_0_1, dd_Smed_v6_4647_0_1, [Score=103, Expect=2e-24]} {RNA1509_46531} {RNA1310_25313} {RNA815_8653}
2. MligTC455_25591 52 1.09 Mlig455_025142

Neo: -

Age: -

 1.821 - - - - 0.839 0.982 Mlig455_025142 {REF} {Length: 1407} {Pfam: Exo70 exocyst complex subunit [PF03081.17, score=20.0]} {RNA1509_10776} {RNA1310_52447} {RNA815_26667}
3. MligTC455_49969 23 0.48 Mlig455_006042

Neo: -

Age: -

 1.658 - - - - 0.704 0.954 Mlig455_006042 {REF} {Length: 2204} {Pfam: F5/8 type C domain [PF00754.27, score=21.8]} {RNA1509_25922} {RNA1310_32867} {RNA815_55792}
4. MligTC455_24261 90 1.87 Mlig455_022408

Neo: -

Age: logFC(26M/2M)=-0.488

 0.98 - - - - - 0.980 Mlig455_022408 {REF} {Length: 2883} {Pfam: Dpy-30 motif [PF05186.15, score=36.5]} {RNA1509_44741} {RNA1310_10316, RNA1509_44741} {RNA1509_44741, RNA815_22683}
5. MligTC455_53957 80 1.66 Mlig455_068224

Neo: -

Age: Up-Down-Up

 0.979 - - - - - 0.979 Mlig455_068224 {REF} {Length: 3283} {RNA1310_18298} {RNA815_25523}
6. MligTC455_28784 65 1.35 Mlig455_060676

Neo: -

Age: logFC(26M/2M)=-0.366

 ANKRD17 0.974 - - - - - 0.974 Mlig455_060676 {REF} {Length: 5241} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=122.5]; Ankyrin repeats (many copies) [PF13637.8, score=110.0]; Ankyrin repeat [PF13606.8, score=74.0]; Ankyrin repeats (many copies) [PF13857.8, score=61.8]; Mab-21 protein [PF03281.16, score=44.0]; Ankyrin repeat [PF00023.32, score=41.5]; ABC transporter transmembrane region [PF13748.8, score=21.9]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=95.5, Expect=4e-19]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=95.9, Expect=2e-19]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=80.1, Expect=8e-15]} {Celegans: WBGene00012124, T28D6.4, [Score=67.8, Expect=3e-11]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=90.5, Expect=2e-18]} {RNA1509_27730} {RNA1310_4721} {RNA815_5358.1}
7. MligTC455_36704 63 1.32 Mlig455_020575

Neo: -

Age: -

Region-enriched R2: 5.118/0.04973

 0.974 - - - - - 0.974 Mlig455_020575 {REF} {Length: 4566} {NoTransDecoderORF} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.1}
8. MligTC455_50573 41 0.86 Mlig455_063506

Neo: -

Age: -

 0.974 - - - - - 0.974 Mlig455_063506 {REF} {Length: 1172} {NoTransDecoderORF} {RNA1310_62768} {RNA815_43019}
9. MligTC455_23080 199 4.15 Mlig455_011733

Neo: -

Age: logFC(26M/2M)=-0.537

 CUBN 0.973 - - - - - 0.973 Mlig455_011733 {REF} {Length: 1824} {Pfam: EGF-like domain [PF00008.29, score=38.3]; Human growth factor-like EGF [PF12661.9, score=21.2]} {Human: ENSG00000107611, CUBN, cubilin, [Score=60.8, Expect=3e-10]} {Mouse: ENSMUSG00000049252, Lrp1b, low density lipoprotein-related protein 1B (deleted in tumors), [Score=52.8, Expect=8e-08]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=51.6, Expect=2e-07]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=51.2, Expect=3e-07]} {Dmel: FBgn0259140, CG42255, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=54.3, Expect=2e-08]} {RNA1509_38266} {RNA1310_19274} {RNA815_9585.2}
10. MligTC455_05881 14 0.29 Mlig455_048278

Neo: -

Age: -

 0.969 - - - - - 0.969 Mlig455_048278 {REF} {Length: 1904} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=35.4]} {RNA1310_71987} {RNA815_42817}
11. MligTC455_15724 24 0.5 Mlig455_050249

Neo: -

Age: -

 CALM2 0.969 - - - - - 0.969 Mlig455_050249 {REF} {Length: 728} {Pfam: EF hand [PF00036.34, score=128.2]; EF-hand domain pair [PF13499.8, score=111.2]; EF hand [PF13202.8, score=97.1]; EF-hand domain [PF13405.8, score=94.2]; EF-hand domain pair [PF13833.8, score=83.8]; EF-hand domain [PF14658.8, score=44.6]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=37.6]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=25.7]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.7]; Dockerin type I domain [PF00404.20, score=21.2]; Protein of unknown function (DUF3349) [PF11829.10, score=20.2]; Tellurite resistance protein TerB [PF05099.15, score=19.4]; Cache domain [PF08269.13, score=18.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=174, Expect=5e-55]; ENSG00000198668, CALM1, calmodulin 1, [Score=172, Expect=4e-55]; ENSG00000160014, CALM3, calmodulin 3, [Score=170, Expect=5e-54]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=170, Expect=3e-54]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=170, Expect=3e-54]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=170, Expect=3e-54]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=164, Expect=1e-51]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=169, Expect=4e-54]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=169, Expect=3e-54]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=169, Expect=2e-54]} {RNA1310_49559} {RNA815_36071}
12. MligTC455_09656 14 0.3 Mlig455_008782

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_008782 {REF} {Length: 329} {NoTransDecoderORF}
13. MligTC455_17947 64 1.34 Mlig455_042563

Neo: -

Age: -

Region-enriched R2: 7.054/0.00113

 ASCL5 0.967 - - - - - 0.967 Mlig455_042563 {REF} {Length: 1821} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=52.5]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [Score=84.7, Expect=6e-20]} {Mouse: ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [Score=84.0, Expect=5e-20]} {Dmel: FBgn0002922, nau, nautilus, [Score=49.3, Expect=6e-07]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [RH, Score=90.9, Expect=4e-22]} {Smed: dd_Smed_v6_14753_0_1, dd_Smed_v6_14753_0_1, [RH, Score=76.6, Expect=2e-17]} {RNA1310_71187}
14. MligTC455_18879 26 0.55 Mlig455_063345

Neo: -

Age: -

 0.967 - - - - - 0.967 Mlig455_063345 {REF} {Length: 769} {NoTransDecoderORF}
15. MligTC455_33747 54 1.13 Mlig455_059482

Neo: -

Age: -

 GRIK2 0.967 - - - - 0.967 - Mlig455_059482 {REF} {Length: 4944} {Pfam: Ligand-gated ion channel [PF00060.28, score=159.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=111.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=82.7]; Receptor family ligand binding region [PF01094.30, score=23.2]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=392, Expect=5e-122]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=385, Expect=3e-119]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=385, Expect=8e-119]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=391, Expect=1e-121]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=387, Expect=9e-121]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=383, Expect=2e-118]} {Dmel: FBgn0039927, CG11155, [Score=373, Expect=6e-115]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=326, Expect=5e-98]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=455, Expect=2e-145]} {RNA1310_7590.1} {RNA815_26485}
16. MligTC455_47068 69 1.43 Mlig455_060910

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_060910 {REF} {Length: 1012}
17. MligTC455_51396 121 2.53 Mlig455_059432

Neo: -

Age: -

 IGFALS 0.966 - - - - - 0.966 Mlig455_059432 {REF} {Length: 4066} {Pfam: Leucine rich repeat [PF13855.8, score=290.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=118.5]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=95.1]; Leucine-rich repeat [PF14580.8, score=78.4]; Leucine Rich Repeat [PF00560.35, score=37.2]} {Human: ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [RH, Score=164, Expect=5e-42]} {Mouse: ENSMUSG00000046070, Igfals, insulin-like growth factor binding protein, acid labile subunit, [RH, Score=157, Expect=6e-40]} {Dmel: FBgn0039728, CG7896, [RH, Score=139, Expect=3e-33]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=134, Expect=9e-32]} {Smed: dd_Smed_v6_6669_0_1, dd_Smed_v6_6669_0_1, [Score=90.1, Expect=2e-18]} {RNA1509_59023} {RNA1310_6354, RNA1509_59023} {RNA1509_59023, RNA815_7087}
18. MligTC455_10216 85 1.77 Mlig455_028808

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_028808 {REF} {Length: 1548} {RNA1509_32459} {RNA1310_2760.1} {RNA815_33964}
19. MligTC455_14045 44 0.93 Mlig455_014678

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_014678 {REF} {Length: 1127} {RNA1509_32807} {RNA1310_50499} {RNA815_11759.1}
20. MligTC455_47214 194 4.05 Mlig455_054363

Neo: -

Age: Down-Up-Up

 MACF1 0.964 - - - - 0.964 - Mlig455_054363 {REF} {Length: 2010} {Human: ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [Score=53.5, Expect=1e-06]} {Celegans: WBGene00000123, ama-1, DNA-directed RNA polymerase II subunit RPB1, [Score=48.5, Expect=1e-05]} {RNA1509_21325} {RNA1310_9087} {RNA815_6838}
21. MligTC455_08728 78 1.63 Mlig455_048047, Mlig455_048066

Neo: -

Age: -

 0.963 - - - - - 0.963

Mlig455_048047 {REF} {Length: 979} {NoTransDecoderORF}

Mlig455_048066 {REF} {Length: 704} {NoTransDecoderORF}
22. MligTC455_15541 46 0.95 Mlig455_004049

Neo: -

Age: -

 SYT7 0.963 - - - - - 0.963 Mlig455_004049 {REF} {Length: 2753} {Pfam: C2 domain [PF00168.32, score=65.0]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=110, Expect=2e-26]; ENSG00000143858, SYT2, synaptotagmin 2, [Score=105, Expect=1e-24]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=105, Expect=1e-24]; ENSMUSG00000027849, Syt6, synaptotagmin VI, [Score=104, Expect=3e-24]; ENSMUSG00000035864, Syt1, synaptotagmin I, [Score=103, Expect=3e-24]; ENSMUSG00000024743, Syt7, synaptotagmin VII, [Score=102, Expect=1e-23]; ENSMUSG00000024261, Syt4, synaptotagmin IV, [Score=100, Expect=6e-23]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=107, Expect=1e-25]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=117, Expect=2e-29]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=103, Expect=2e-24]} {RNA1509_57171} {RNA1310_13836} {RNA815_4752.1}
23. MligTC455_26666 497 10.35 Mlig455_014576

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.303

 CNBD2 0.963 - - - - - 0.963 Mlig455_014576 {REF} {Length: 3147} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=74.1]} {Human: ENSG00000149646, CNBD2, cyclic nucleotide binding domain containing 2, [RH, Score=97.8, Expect=2e-20]} {Mouse: ENSMUSG00000038085, Cnbd2, cyclic nucleotide binding domain containing 2, [RH, Score=86.3, Expect=3e-17]} {Dmel: FBgn0259243, Pka-R1, Protein kinase, cAMP-dependent, regulatory subunit type 1, [Score=58.2, Expect=9e-09]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=62.0, Expect=5e-10]} {Smed: dd_Smed_v6_15589_0_1, dd_Smed_v6_15589_0_1, [RH, Score=451, Expect=2e-148]} {RNA1509_14495, RNA1509_43806} {RNA1310_6298, RNA1509_43806} {RNA1509_43806, RNA815_2010}
24. MligTC455_45300 333 6.94 Mlig455_020728

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_020728 {REF} {Length: 4245} {Pfam: C2H2-type zinc finger [PF13894.8, score=40.5]; Zinc finger, C2H2 type [PF00096.28, score=26.8]; Cysteine rich domain with multizinc binding regions [PF17979.3, score=23.7]} {Dmel: FBgn0036725, CG18265, [RH, Score=55.5, Expect=3e-07]} {Celegans: WBGene00000995, die-1, Dorsal Intercalation and Elongation defect, [RH, Score=58.9, Expect=2e-08]} {Smed: dd_Smed_v6_34785_0_1, dd_Smed_v6_34785_0_1, [RH, Score=121, Expect=1e-28]} {RNA1509_19455} {RNA1310_2166.1, RNA1509_19455} {RNA1509_19455, RNA815_12667}
25. MligTC455_42779 52 1.08 Mlig455_034985

Neo: -

Age: -

 TIA1 0.962 - - - - - 0.962 Mlig455_034985 {REF} {Length: 2883} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=137.6]; RNA binding motif [PF08777.13, score=27.7]; RNA recognition motif [PF16367.7, score=27.3]; Cytosolic domain of 10TM putative phosphate transporter [PF14703.8, score=22.0]; Nup53/35/40-type RNA recognition motif [PF05172.15, score=19.3]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=19.0]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [RH, Score=236, Expect=6e-74]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [RH, Score=225, Expect=2e-69]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [RH, Score=234, Expect=2e-73]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [RH, Score=225, Expect=2e-70]} {Dmel: FBgn0085391, trv, trivet, [RH, Score=242, Expect=4e-75]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [RH, Score=229, Expect=2e-71]} {Smed: dd_Smed_v6_10924_0_1, dd_Smed_v6_10924_0_1, [RH, Score=359, Expect=2e-122]} {RNA1509_20262} {RNA1310_6771} {RNA815_11494}
26. MligTC455_46857 65 1.36 Mlig455_027226

Neo: -

Age: Down-Up-Down

 TJP2 0.961 - - - - - 0.961 Mlig455_027226 {REF} {Length: 3999} {Pfam: PDZ domain [PF00595.26, score=90.1]; PDZ domain [PF17820.3, score=65.7]; Guanylate kinase [PF00625.23, score=35.9]; PDZ domain [PF13180.8, score=34.4]; ZU5 domain [PF00791.22, score=27.1]} {Human: ENSG00000119139, TJP2, tight junction protein 2, [RH, Score=184, Expect=3e-48]; ENSG00000277401, TJP1, tight junction protein 1, [RH, Score=184, Expect=5e-47]; ENSG00000104067, TJP1, tight junction protein 1, [RH, Score=184, Expect=5e-47]; ENSG00000285130, AL358113.1, tight junction protein 2, [RH, Score=182, Expect=1e-46]} {Mouse: ENSMUSG00000030516, Tjp1, tight junction protein 1, [RH, Score=185, Expect=1e-47]; ENSMUSG00000024812, Tjp2, tight junction protein 2, [RH, Score=182, Expect=1e-46]} {Dmel: FBgn0262614, pyd, polychaetoid, [Score=210, Expect=9e-56]} {Celegans: WBGene00013683, zoo-1, ZO-1 (Zonula Occludens tight junctional protein) Ortholog, [RH, Score=175, Expect=1e-44]} {Smed: dd_Smed_v6_7374_0_1, dd_Smed_v6_7374_0_1, [Score=53.1, Expect=7e-07]} {RNA1509_55128} {RNA1310_1784} {RNA815_1919}
27. MligTC455_23314 139 2.9 Mlig455_039680

Neo: -

Age: -

 CACNA2D2 0.959 - - - - - 0.959 Mlig455_039680 {REF} {Length: 4498} {Pfam: VWA N-terminal [PF08399.13, score=89.9]; Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=86.3]; von Willebrand factor type A domain [PF13768.8, score=38.0]; von Willebrand factor type A domain [PF00092.30, score=36.1]; von Willebrand factor type A domain [PF13519.8, score=31.5]; Cache domain [PF02743.20, score=26.9]} {Human: ENSG00000007402, CACNA2D2, calcium voltage-gated channel auxiliary subunit alpha2delta 2, [RH, Score=340, Expect=6e-98]; ENSG00000153956, CACNA2D1, calcium voltage-gated channel auxiliary subunit alpha2delta 1, [RH, Score=328, Expect=3e-94]} {Mouse: ENSMUSG00000010066, Cacna2d2, calcium channel, voltage-dependent, alpha 2/delta subunit 2, [RH, Score=338, Expect=1e-97]; ENSMUSG00000040118, Cacna2d1, calcium channel, voltage-dependent, alpha2/delta subunit 1, [RH, Score=330, Expect=4e-95]} {Dmel: FBgn0028863, CG4587, [RH, Score=234, Expect=2e-62]} {Celegans: WBGene00007041, tag-180, [RH, Score=169, Expect=3e-42]} {Smed: dd_Smed_v6_19048_0_1, dd_Smed_v6_19048_0_1, [Score=155, Expect=5e-38]} {RNA1509_48733} {RNA1310_3844, RNA1509_48733} {RNA1509_48733, RNA815_18071}
28. MligTC455_43136 167 3.48 Mlig455_058289

Neo: -

Age: -

 KNDC1 0.958 - - - - - 0.958 Mlig455_058289 {REF} {Length: 7050} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=22.9]} {Human: ENSG00000171798, KNDC1, kinase non-catalytic C-lobe domain containing 1, [RH, Score=65.5, Expect=8e-10]} {Mouse: ENSMUSG00000066129, Kndc1, kinase non-catalytic C-lobe domain (KIND) containing 1, [RH, Score=66.2, Expect=3e-10]} {RNA1509_25786} {RNA1310_3017.1, RNA1509_25786} {RNA1509_25786, RNA815_33134}
29. MligTC455_40365 195 4.05 Mlig455_038370

Neo: -

Age: Down-Up-Down

Region-enriched R2: 3.989/0.00156

 0.957 - - - - - 0.957 Mlig455_038370 {REF} {Length: 3062} {RNA1509_57598} {RNA1310_48414, RNA1509_57598} {RNA1509_57598, RNA815_41099}
30. MligTC455_07516 112 2.34 Mlig455_060804

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_060804 {REF} {Length: 844} {Pfam: Presenilin [PF01080.19, score=19.5]} {RNA1509_21195} {RNA1310_23162} {RNA815_26275}
31. MligTC455_32540 184 3.84 Mlig455_018323

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.322

 0.956 - - - - - 0.956 Mlig455_018323 {REF} {Length: 5951} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=60.2]} {RNA1509_43484, RNA1509_9231} {RNA1310_1476.1, RNA1509_43484, RNA1509_9231} {RNA1509_43484, RNA1509_9231, RNA815_429.1}
32. MligTC455_32522 134 2.8 Mlig455_040944

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_040944 {REF} {Length: 2473} {RNA1509_46835} {RNA1310_21335.2} {RNA815_21965}
33. MligTC455_08498 26 0.55 Mlig455_053380

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_053380 {REF} {Length: 962} {NoTransDecoderORF} {RNA1310_91082}
34. MligTC455_16895 508 10.58 Mlig455_020558, Mlig455_044511

Neo: -

Age: Up-Down-Down

Region-enriched R8: 4.020/0.00009
Region-enriched R7: 2.782/0.03064

 FAT4 0.954 - - - - - 0.954

Mlig455_020558 {REF} {Length: 15261} {Pfam: Cadherin domain [PF00028.19, score=236.6]; EGF-like domain [PF00008.29, score=31.7]; Laminin G domain [PF02210.26, score=27.3]; Laminin G domain [PF00054.25, score=27.1]; Long Rib domain [PF18957.2, score=19.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=523, Expect=9e-151]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=509, Expect=1e-146]} {Dmel: FBgn0001075, ft, fat, [Score=503, Expect=2e-144]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=234, Expect=2e-61]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [Score=298, Expect=7e-81]} {RNA1509_19257} {RNA1310_36936, RNA1509_19257} {RNA1509_19257, RNA815_35431}

Mlig455_044511 {REF} {Length: 14996} {Pfam: Cadherin domain [PF00028.19, score=1056.4]; Cadherin-like [PF16184.7, score=66.3]; Cadherin-like [PF08266.14, score=54.7]; EGF-like domain [PF00008.29, score=28.9]; Long Rib domain [PF18957.2, score=27.4]; Cadherin prodomain like [PF08758.13, score=26.9]; Laminin G domain [PF00054.25, score=22.3]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=1341, Expect=0.0]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=1291, Expect=0.0]} {Dmel: FBgn0001075, ft, fat, [Score=726, Expect=0.0]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=303, Expect=2e-81]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [Score=280, Expect=1e-74]} {RNA1509_19257, RNA1509_53071} {RNA1310_36936, RNA1509_53071} {RNA1509_53071, RNA815_35431}
35. MligTC455_40287 116 2.41 Mlig455_043891

Neo: -

Age: logFC(26M/2M)=-0.916

Regeneration-enriched BL: 6.689
Regeneration-enriched R2: 6.021

 0.954 - - - - - 0.954 Mlig455_043891 {REF} {Length: 4345} {RNA1509_22214} {RNA1310_39071, RNA1509_22214} {RNA1509_22214, RNA815_41273}
36. MligTC455_48213 164 3.41 Mlig455_056285, Mlig455_056310

Neo: -

Age: -

Region-enriched R2: 5.079/0.00142

 0.954 - - - - - 0.954

Mlig455_056285 {REF} {Length: 2259} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}

Mlig455_056310 {REF} {Length: 1953} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}
37. MligTC455_13046 94 1.96 Mlig455_027003, Mlig455_043462

Neo: -

Age: -

 0.953 - - - - - 0.953

Mlig455_027003 {REF} {Length: 2071} {NoTransDecoderORF} {RNA1509_31427} {RNA1310_20953.1} {RNA815_18897.1}

Mlig455_043462 {REF} {Length: 746} {NoTransDecoderORF} {RNA1310_97651}
38. MligTC455_21696 17 0.36 Mlig455_041493

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_041493 {REF} {Length: 2887} {RNA1509_8934} {RNA1310_1968.1} {RNA815_7750}
39. MligTC455_45963 404 8.41 Mlig455_011128, Mlig455_043757

Neo: -

Age: -

 0.953 - - - - - 0.953

Mlig455_011128 {REF} {Length: 1167} {NoTransDecoderORF} {RNA1509_5701} {RNA1310_32112.1} {RNA815_453.1}

Mlig455_043757 {REF} {Length: 1039} {NoTransDecoderORF} {RNA1509_43730, RNA1509_5701} {RNA1310_32112.1, RNA1509_43730} {RNA1509_43730, RNA815_453.2}
40. MligTC455_46425 491 10.23 Mlig455_012189

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_012189 {REF} {Length: 1382} {RNA1509_53324, RNA1509_8642} {RNA1310_7508, RNA1509_53324, RNA1509_8642} {RNA1509_53324, RNA1509_8642, RNA815_176.1}
41. MligTC455_08216 34 0.7 Mlig455_009138

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_009138 {REF} {Length: 379} {NoTransDecoderORF} {RNA1310_66482.1} {RNA815_62564}
42. MligTC455_27063 74 1.54 Mlig455_019209

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_019209 {REF} {Length: 481} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
43. MligTC455_51254 45 0.94 Mlig455_062218

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_062218 {REF} {Length: 1157} {NoTransDecoderORF}
44. MligTC455_28278 110 2.28 Mlig455_018484

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_018484 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_17510.1} {RNA815_9674}
45. MligTC455_28575 27 0.55 Mlig455_028366, Mlig455_052765

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_028366 {REF} {Length: 771} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_22744} {RNA815_55880}

Mlig455_052765 {REF} {Length: 1415} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15798} {RNA1310_22744} {RNA815_55880}
46. MligTC455_34465 21 0.44 Mlig455_064507

Neo: -

Age: Up-Down-Down

 0.951 - - - - 0.951 - Mlig455_064507 {REF} {Length: 2980} {RNA1509_6735} {RNA1310_1341.1, RNA1509_6735} {RNA1509_6735, RNA815_2761}
47. MligTC455_22125 178 3.71 Mlig455_028579, Mlig455_028597

Neo: -

Age: -

Region-enriched R2: 5.949/0.00261

 0.95 - - - - - 0.950

Mlig455_028579 {REF} {Length: 993} {RNA1509_54214} {RNA1310_51652} {RNA815_36975}

Mlig455_028597 {REF} {Length: 962} {RNA1509_54214} {RNA1310_51652} {RNA815_36975}
48. MligTC455_42523 77 1.6 Mlig455_011207

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_011207 {REF} {Length: 1339} {NoTransDecoderORF}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA