TomoSeq data search

Data search

Results for MligTC455_41752

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41752	932	19.42	Mlig455_015685, Mlig455_015697	Neo: - Age: -	CCZ1, RBBP5	Mlig455_015685 {REF} {Length: 3593} {TRANSSPLICED} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=88.3]; Intu longin-like domain 2 [PF19032.2, score=75.3]; WD domain, G-beta repeat [PF00400.34, score=45.0]; Intu longin-like domain 3 [PF19033.2, score=36.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.6]} {Human: ENSG00000117222, RBBP5, RB binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000026439, Rbbp5, retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0036973, Rbbp5, Retinoblastoma binding protein 5, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00017683, rbbp-5, Retinoblastoma-binding protein homolog 5, [RH, Score=298, Expect=6e-91]} {Smed: dd_Smed_v6_4897_0_1, dd_Smed_v6_4897_0_1, [RH, Score=523, Expect=4e-176]} {RNA1509_13134} {RNA1310_14840} {RNA815_5189.1} Mlig455_015697 {REF} {Length: 1937} {TRANSSPLICED} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=89.7]; Intu longin-like domain 2 [PF19032.2, score=77.5]; Intu longin-like domain 3 [PF19033.2, score=38.3]} {Human: ENSG00000122674, CCZ1, CCZ1 homolog, vacuolar protein trafficking and biogenesis associated, [RH, Score=311, Expect=2e-100]; ENSG00000146574, CCZ1B, CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, [RH, Score=311, Expect=2e-100]} {Mouse: ENSMUSG00000029617, Ccz1, CCZ1 vacuolar protein trafficking and biogenesis associated, [RH, Score=318, Expect=3e-103]} {Dmel: FBgn0035470, Ccz1, Caffeine, calcium, zinc sensitivity 1, [RH, Score=154, Expect=4e-41]} {Celegans: WBGene00010283, ccz-1, [RH, Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_9997_0_1, dd_Smed_v6_9997_0_1, [RH, Score=138, Expect=9e-36]} {RNA1509_13134} {RNA1310_14840, RNA1509_13134} {RNA1509_13134, RNA815_5189.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41752

932

19.42

Mlig455_015685, Mlig455_015697

Neo: -

Age: -

CCZ1, RBBP5

Mlig455_015685 {REF} {Length: 3593} {TRANSSPLICED} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=88.3]; Intu longin-like domain 2 [PF19032.2, score=75.3]; WD domain, G-beta repeat [PF00400.34, score=45.0]; Intu longin-like domain 3 [PF19033.2, score=36.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.6]} {Human: ENSG00000117222, RBBP5, RB binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000026439, Rbbp5, retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0036973, Rbbp5, Retinoblastoma binding protein 5, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00017683, rbbp-5, Retinoblastoma-binding protein homolog 5, [RH, Score=298, Expect=6e-91]} {Smed: dd_Smed_v6_4897_0_1, dd_Smed_v6_4897_0_1, [RH, Score=523, Expect=4e-176]} {RNA1509_13134} {RNA1310_14840} {RNA815_5189.1}

Mlig455_015697 {REF} {Length: 1937} {TRANSSPLICED} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=89.7]; Intu longin-like domain 2 [PF19032.2, score=77.5]; Intu longin-like domain 3 [PF19033.2, score=38.3]} {Human: ENSG00000122674, CCZ1, CCZ1 homolog, vacuolar protein trafficking and biogenesis associated, [RH, Score=311, Expect=2e-100]; ENSG00000146574, CCZ1B, CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, [RH, Score=311, Expect=2e-100]} {Mouse: ENSMUSG00000029617, Ccz1, CCZ1 vacuolar protein trafficking and biogenesis associated, [RH, Score=318, Expect=3e-103]} {Dmel: FBgn0035470, Ccz1, Caffeine, calcium, zinc sensitivity 1, [RH, Score=154, Expect=4e-41]} {Celegans: WBGene00010283, ccz-1, [RH, Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_9997_0_1, dd_Smed_v6_9997_0_1, [RH, Score=138, Expect=9e-36]} {RNA1509_13134} {RNA1310_14840, RNA1509_13134} {RNA1509_13134, RNA815_5189.1}

Cumulative graph for MligTC455_41752

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.942	4.659	0.03849	0.47999
RegionR2	0.971	4.659	0.20884	0.57204
RegionR3	1.271	4.659	0.03079	0.30198
RegionR4	1.26	4.659	0.06375	0.22720
RegionR5	1.342	4.659	0.01215	0.06657
RegionR6	0.911	4.659	0.19709	0.76595
RegionR7	0.479	4.659	0.59299	1.00000
RegionR8	0.707	4.659	0.47193	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.642	4.659	0.99995	1.00000
RegenerationR2	0.541	4.659	0.07318	0.43890
RegenerationR3	-0.458	4.659	0.18580	0.62210
RegenerationR4	-0.005	4.659	0.98484	1.00000
RegenerationR5	0.243	4.659	0.43614	0.82216
RegenerationR6	0.011	4.659	0.97590	1.00000
RegenerationBL	0.686	4.659	0.11546	0.40201
RegenerationTP	-0.296	4.659	0.58499	0.95255

Genes with expression patterns similar to MligTC455_41752

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41752	932	19.42	Mlig455_015685, Mlig455_015697	Neo: - Age: -	CCZ1, RBBP5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015685 {REF} {Length: 3593} {TRANSSPLICED} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=88.3]; Intu longin-like domain 2 [PF19032.2, score=75.3]; WD domain, G-beta repeat [PF00400.34, score=45.0]; Intu longin-like domain 3 [PF19033.2, score=36.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.6]} {Human: ENSG00000117222, RBBP5, RB binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000026439, Rbbp5, retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0036973, Rbbp5, Retinoblastoma binding protein 5, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00017683, rbbp-5, Retinoblastoma-binding protein homolog 5, [RH, Score=298, Expect=6e-91]} {Smed: dd_Smed_v6_4897_0_1, dd_Smed_v6_4897_0_1, [RH, Score=523, Expect=4e-176]} {RNA1509_13134} {RNA1310_14840} {RNA815_5189.1} Mlig455_015697 {REF} {Length: 1937} {TRANSSPLICED} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=89.7]; Intu longin-like domain 2 [PF19032.2, score=77.5]; Intu longin-like domain 3 [PF19033.2, score=38.3]} {Human: ENSG00000122674, CCZ1, CCZ1 homolog, vacuolar protein trafficking and biogenesis associated, [RH, Score=311, Expect=2e-100]; ENSG00000146574, CCZ1B, CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, [RH, Score=311, Expect=2e-100]} {Mouse: ENSMUSG00000029617, Ccz1, CCZ1 vacuolar protein trafficking and biogenesis associated, [RH, Score=318, Expect=3e-103]} {Dmel: FBgn0035470, Ccz1, Caffeine, calcium, zinc sensitivity 1, [RH, Score=154, Expect=4e-41]} {Celegans: WBGene00010283, ccz-1, [RH, Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_9997_0_1, dd_Smed_v6_9997_0_1, [RH, Score=138, Expect=9e-36]} {RNA1509_13134} {RNA1310_14840, RNA1509_13134} {RNA1509_13134, RNA815_5189.1}
2.	MligTC455_12154	321	6.69	Mlig455_040399	Neo: Germline Age: Up-Down-Down	DIS3L2	0.955	-	-	-	0.955	-	-	Mlig455_040399 {REF} {Length: 3964} {TRANSSPLICED} {Pfam: RNB domain [PF00773.21, score=286.3]; Dis3-like cold-shock domain 2 (CSD2) [PF17849.3, score=53.2]; DIS3-like exonuclease 2 C terminal [PF17877.3, score=37.3]; Rrp44-like cold shock domain [PF17216.5, score=28.3]} {Human: ENSG00000144535, DIS3L2, DIS3 like 3'-5' exoribonuclease 2, [RH, Score=484, Expect=5e-155]} {Mouse: ENSMUSG00000053333, Dis3l2, DIS3 like 3'-5' exoribonuclease 2, [RH, Score=493, Expect=6e-159]} {Dmel: FBgn0035111, Dis3l2, Dis3 like 3'-5' exoribonuclease 2, [RH, Score=295, Expect=5e-84]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [RH, Score=438, Expect=2e-138]} {Smed: dd_Smed_v6_7044_0_1, dd_Smed_v6_7044_0_1, [RH, Score=486, Expect=9e-157]} {RNA1509_28779, RNA1509_30644} {RNA1310_2522.1, RNA1509_28779} {RNA1509_28779, RNA815_1747}
3.	MligTC455_45459	2475	51.56	Mlig455_057321	Neo: - Age: -	VWA5A	0.95	-	-	-	-	0.950	-	Mlig455_057321 {REF} {Length: 1090} {Pfam: von Willebrand factor type A domain [PF13768.8, score=87.1]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=57.7]; von Willebrand factor type A domain [PF00092.30, score=41.1]; von Willebrand factor type A domain [PF13519.8, score=40.3]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=27.4]; VWA domain containing CoxE-like protein [PF05762.16, score=18.9]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=175, Expect=1e-44]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=186, Expect=2e-48]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=202, Expect=2e-54]} {RNA1509_22593, RNA1509_3761, RNA1509_44533} {RNA1310_3935.1, RNA1509_22593, RNA1509_44533} {RNA1509_22593, RNA1509_44533, RNA815_28561}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41752

932

19.42

Mlig455_015685, Mlig455_015697

Neo: -

Age: -

CCZ1, RBBP5

1.000

MligTC455_12154

321

6.69

Mlig455_040399

Neo: Germline

Age: Up-Down-Down

DIS3L2

0.955

Mlig455_040399 {REF} {Length: 3964} {TRANSSPLICED} {Pfam: RNB domain [PF00773.21, score=286.3]; Dis3-like cold-shock domain 2 (CSD2) [PF17849.3, score=53.2]; DIS3-like exonuclease 2 C terminal [PF17877.3, score=37.3]; Rrp44-like cold shock domain [PF17216.5, score=28.3]} {Human: ENSG00000144535, DIS3L2, DIS3 like 3'-5' exoribonuclease 2, [RH, Score=484, Expect=5e-155]} {Mouse: ENSMUSG00000053333, Dis3l2, DIS3 like 3'-5' exoribonuclease 2, [RH, Score=493, Expect=6e-159]} {Dmel: FBgn0035111, Dis3l2, Dis3 like 3'-5' exoribonuclease 2, [RH, Score=295, Expect=5e-84]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [RH, Score=438, Expect=2e-138]} {Smed: dd_Smed_v6_7044_0_1, dd_Smed_v6_7044_0_1, [RH, Score=486, Expect=9e-157]} {RNA1509_28779, RNA1509_30644} {RNA1310_2522.1, RNA1509_28779} {RNA1509_28779, RNA815_1747}

MligTC455_45459

2475

51.56

Mlig455_057321

Neo: -

Age: -

VWA5A

0.95

0.950

Mlig455_057321 {REF} {Length: 1090} {Pfam: von Willebrand factor type A domain [PF13768.8, score=87.1]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=57.7]; von Willebrand factor type A domain [PF00092.30, score=41.1]; von Willebrand factor type A domain [PF13519.8, score=40.3]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=27.4]; VWA domain containing CoxE-like protein [PF05762.16, score=18.9]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=175, Expect=1e-44]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=186, Expect=2e-48]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=202, Expect=2e-54]} {RNA1509_22593, RNA1509_3761, RNA1509_44533} {RNA1310_3935.1, RNA1509_22593, RNA1509_44533} {RNA1509_22593, RNA1509_44533, RNA815_28561}