TomoSeq data search

Data search

Results for MligTC455_45459

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_45459

2475

51.56

Mlig455_057321

Neo: -

Age: -

VWA5A

Mlig455_057321 {REF} {Length: 1090} {Pfam: von Willebrand factor type A domain [PF13768.8, score=87.1]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=57.7]; von Willebrand factor type A domain [PF00092.30, score=41.1]; von Willebrand factor type A domain [PF13519.8, score=40.3]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=27.4]; VWA domain containing CoxE-like protein [PF05762.16, score=18.9]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=175, Expect=1e-44]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=186, Expect=2e-48]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=202, Expect=2e-54]} {RNA1509_22593, RNA1509_3761, RNA1509_44533} {RNA1310_3935.1, RNA1509_22593, RNA1509_44533} {RNA1509_22593, RNA1509_44533, RNA815_28561}

Cumulative graph for MligTC455_45459

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.788	5.867	0.27818	0.92883
RegionR2	0.078	5.867	0.81220	1.00000
RegionR3	0.152	5.867	0.56738	1.00000
RegionR4	0.145	5.867	0.64543	0.94933
RegionR5	0.146	5.867	0.56173	0.92095
RegionR6	0.054	5.867	0.84156	1.00000
RegionR7	0.085	5.867	0.79414	1.00000
RegionR8	0.127	5.867	0.75334	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.497	5.867	0.65050	1.00000
RegenerationR2	0.619	5.867	0.03141	0.29086
RegenerationR3	0.369	5.867	0.23520	0.66946
RegenerationR4	0.277	5.867	0.38854	0.80645
RegenerationR5	0.366	5.867	0.21704	0.65187
RegenerationR6	0.227	5.867	0.46993	0.78434
RegenerationBL	-0.177	5.867	0.60341	0.94990
RegenerationTP	0.343	5.867	0.33542	0.77967

Genes with expression patterns similar to MligTC455_45459

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_45459	2475	51.56	Mlig455_057321	Neo: - Age: -	VWA5A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_057321 {REF} {Length: 1090} {Pfam: von Willebrand factor type A domain [PF13768.8, score=87.1]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=57.7]; von Willebrand factor type A domain [PF00092.30, score=41.1]; von Willebrand factor type A domain [PF13519.8, score=40.3]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=27.4]; VWA domain containing CoxE-like protein [PF05762.16, score=18.9]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=175, Expect=1e-44]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=186, Expect=2e-48]} {Smed: dd_Smed_v6_1027_0_1, dd_Smed_v6_1027_0_1, [Score=202, Expect=2e-54]} {RNA1509_22593, RNA1509_3761, RNA1509_44533} {RNA1310_3935.1, RNA1509_22593, RNA1509_44533} {RNA1509_22593, RNA1509_44533, RNA815_28561}
2.	MligTC455_45458	2463	51.31	Mlig455_037559	Neo: - Age: -	VWA5A	5.994	1.000	0.999	0.999	0.999	0.998	0.999	Mlig455_037559 {REF} {Length: 3202} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13768.8, score=86.3]; Vault protein inter-alpha-trypsin domain [PF08487.12, score=57.8]; von Willebrand factor type A domain [PF13519.8, score=40.0]; von Willebrand factor type A domain [PF00092.30, score=38.4]; Vault protein inter-alpha-trypsin domain [PF13757.8, score=27.4]} {Human: ENSG00000110002, VWA5A, von Willebrand factor A domain containing 5A, [Score=169, Expect=5e-43]} {Mouse: ENSMUSG00000023186, Vwa5a, von Willebrand factor A domain containing 5A, [Score=186, Expect=2e-48]} {Smed: dd_Smed_v6_1027_0_2, dd_Smed_v6_1027_0_2, [Score=182, Expect=2e-48]} {RNA1509_17712, RNA1509_3761} {RNA1310_3935.1, RNA1509_17712, RNA1509_3761} {RNA1509_17712, RNA1509_3761, RNA815_2368.1}
3.	MligTC455_24170	2908	60.58	Mlig455_025932	Neo: - Age: Down-Up-Down	PDCD6	1.676	-	-	0.724	-	0.952	-	Mlig455_025932 {REF} {Length: 1040} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=73.5]; EF-hand domain [PF13405.8, score=70.3]; EF hand [PF00036.34, score=67.4]; EF-hand domain pair [PF13833.8, score=55.2]; EF hand [PF13202.8, score=45.6]} {Human: ENSG00000249915, PDCD6, programmed cell death 6, [RH, Score=218, Expect=6e-72]} {Mouse: ENSMUSG00000021576, Pdcd6, programmed cell death 6, [RH, Score=216, Expect=3e-71]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=225, Expect=3e-75]} {Celegans: WBGene00019770, M04F3.4, [Score=193, Expect=6e-63]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=228, Expect=1e-76]} {RNA1509_12719, RNA1509_19462} {RNA1310_34663.1, RNA1509_12719} {RNA1509_12719, RNA815_17202}
4.	MligTC455_49281	362	7.54	Mlig455_020515	Neo: - Age: -	VAC14	0.976	-	-	-	0.976	-	-	Mlig455_020515 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Vacuolar protein 14 C-terminal Fig4p binding [PF11916.10, score=177.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=110.3]; HEAT repeat [PF02985.24, score=33.1]; Dopey, N-terminal [PF04118.16, score=18.2]} {Human: ENSG00000103043, VAC14, Vac14, PIKFYVE complex component, [RH, Score=407, Expect=5e-131]} {Mouse: ENSMUSG00000010936, Vac14, Vac14 homolog (S. cerevisiae), [RH, Score=277, Expect=6e-82]} {Dmel: FBgn0038058, CG5608, [RH, Score=374, Expect=2e-119]} {Celegans: WBGene00010565, vacl-14, VAC (Yeast VACuole morphology)-Like, [RH, Score=322, Expect=6e-100]} {Smed: dd_Smed_v6_4616_0_1, dd_Smed_v6_4616_0_1, [RH, Score=190, Expect=3e-51]} {RNA1509_14711} {RNA1310_7953} {RNA815_10330}
5.	MligTC455_41752	932	19.42	Mlig455_015685, Mlig455_015697	Neo: - Age: -	CCZ1, RBBP5	0.95	-	-	-	-	0.950	-	Mlig455_015685 {REF} {Length: 3593} {TRANSSPLICED} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=88.3]; Intu longin-like domain 2 [PF19032.2, score=75.3]; WD domain, G-beta repeat [PF00400.34, score=45.0]; Intu longin-like domain 3 [PF19033.2, score=36.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.6]} {Human: ENSG00000117222, RBBP5, RB binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000026439, Rbbp5, retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0036973, Rbbp5, Retinoblastoma binding protein 5, [RH, Score=560, Expect=0.0]} {Celegans: WBGene00017683, rbbp-5, Retinoblastoma-binding protein homolog 5, [RH, Score=298, Expect=6e-91]} {Smed: dd_Smed_v6_4897_0_1, dd_Smed_v6_4897_0_1, [RH, Score=523, Expect=4e-176]} {RNA1509_13134} {RNA1310_14840} {RNA815_5189.1} Mlig455_015697 {REF} {Length: 1937} {TRANSSPLICED} {Pfam: First Longin domain of INTU, CCZ1 and HPS4 [PF19031.2, score=89.7]; Intu longin-like domain 2 [PF19032.2, score=77.5]; Intu longin-like domain 3 [PF19033.2, score=38.3]} {Human: ENSG00000122674, CCZ1, CCZ1 homolog, vacuolar protein trafficking and biogenesis associated, [RH, Score=311, Expect=2e-100]; ENSG00000146574, CCZ1B, CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, [RH, Score=311, Expect=2e-100]} {Mouse: ENSMUSG00000029617, Ccz1, CCZ1 vacuolar protein trafficking and biogenesis associated, [RH, Score=318, Expect=3e-103]} {Dmel: FBgn0035470, Ccz1, Caffeine, calcium, zinc sensitivity 1, [RH, Score=154, Expect=4e-41]} {Celegans: WBGene00010283, ccz-1, [RH, Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_9997_0_1, dd_Smed_v6_9997_0_1, [RH, Score=138, Expect=9e-36]} {RNA1509_13134} {RNA1310_14840, RNA1509_13134} {RNA1509_13134, RNA815_5189.1}

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