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Results for MligTC455_41763

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41763 84 1.75 Mlig455_065446

Neo: -

Age: logFC(26M/2M)=-0.624

 Mlig455_065446 {REF} {Length: 1448} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=50.8]} {Smed: dd_Smed_v6_21509_0_1, dd_Smed_v6_21509_0_1, [Score=53.5, Expect=7e-08]} {RNA1310_24513} {RNA815_25505}

Cumulative graph for MligTC455_41763

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.298 1.662 0.86974 1.00000
RegionR2 0.615 1.662 0.44983 0.83776
RegionR3 0.447 1.662 0.49654 0.99271
RegionR4 -0.699 1.662 0.36274 0.68611
RegionR5 -0.865 1.662 0.21860 0.51958
RegionR6 -0.142 1.662 0.85727 1.00000
RegionR7 0.847 1.662 0.33034 0.96542
RegionR8 -0.501 1.662 0.72203 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.638 1.662 0.28947 0.98735
RegenerationR2 -2.322 1.662 0.00260 0.07706
RegenerationR3 -1.156 1.662 0.12392 0.54423
RegenerationR4 0.214 1.662 0.77334 0.97780
RegenerationR5 -1.599 1.662 0.06780 0.40945
RegenerationR6 -0.444 1.662 0.60288 0.86997
RegenerationBL -5.151 1.662 0.02520 0.17474
RegenerationTP 0.231 1.662 0.83049 1.00000


Genes with expression patterns similar to MligTC455_41763

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41763 84 1.75 Mlig455_065446

Neo: -

Age: logFC(26M/2M)=-0.624

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_065446 {REF} {Length: 1448} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=50.8]} {Smed: dd_Smed_v6_21509_0_1, dd_Smed_v6_21509_0_1, [Score=53.5, Expect=7e-08]} {RNA1310_24513} {RNA815_25505}
2. MligTC455_15187 713 14.85 Mlig455_042720, Mlig455_042822

Neo: -

Age: -

Region-enriched R7: 3.051/0.00000

Regeneration-downregulated BL: -2.302

Regeneration-depleted BL: -2.302

 FOXRED2 1.711 - - 0.727 - - 0.984

Mlig455_042720 {REF} {Length: 2916} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=161.1]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=51.9]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=28.5]; FAD dependent oxidoreductase [PF01266.26, score=27.7]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=27.5]; HI0933-like protein [PF03486.16, score=25.2]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=22.9]; FAD binding domain [PF01494.21, score=20.5]; Flavin-binding monooxygenase-like [PF00743.21, score=19.9]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [RH, Score=490, Expect=2e-165]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [RH, Score=475, Expect=9e-160]} {Smed: dd_Smed_v6_12138_0_1, dd_Smed_v6_12138_0_1, [RH, Score=473, Expect=4e-160]} {RNA1509_14772} {RNA1310_8010, RNA1509_14772} {RNA1509_14772, RNA815_3364.1}

Mlig455_042822 {REF} {Length: 2921} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=137.6]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=46.8]; FAD dependent oxidoreductase [PF01266.26, score=31.2]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=31.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=29.2]; HI0933-like protein [PF03486.16, score=26.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=25.6]; FAD binding domain [PF01494.21, score=23.2]; Flavin-binding monooxygenase-like [PF00743.21, score=21.0]; FAD-NAD(P)-binding [PF13454.8, score=18.8]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [Score=276, Expect=3e-87]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [Score=263, Expect=2e-82]} {Smed: dd_Smed_v6_12138_0_2, dd_Smed_v6_12138_0_2, [Score=268, Expect=2e-86]} {RNA1509_14772} {RNA1310_8010} {RNA815_3364.1}
3. MligTC455_13810 309 6.44 Mlig455_024887

Neo: -

Age: Down-Down-Up

Region-enriched R7: 3.860/0.00000

Regeneration-downregulated BL: -7.793

Regeneration-depleted BL: -7.793

 1.704 - - 0.750 - 0.954 - Mlig455_024887 {REF} {Length: 2641} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=33.8]; Prokaryotic RING finger family 4 [PF14447.8, score=30.7]} {RNA1310_44589} {RNA815_56600}
4. MligTC455_45588 228 4.74 Mlig455_035193

Neo: -

Age: -

 1.702 - - 0.956 - - 0.746 Mlig455_035193 {REF} {Length: 2180} {RNA1509_41549} {RNA1310_5353.1, RNA1509_41549} {RNA1509_41549, RNA815_4360}
5. MligTC455_12431 29 0.6 Mlig455_022056, Mlig455_062894

Neo: -

Age: -

 KIAA1614 0.986 - - - - - 0.986

Mlig455_022056 {REF} {Length: 1265} {Human: ENSG00000135835, KIAA1614, KIAA1614, [Score=64.3, Expect=8e-12]} {Mouse: ENSMUSG00000033722, BC034090, cDNA sequence BC034090, [Score=63.9, Expect=4e-11]} {RNA1310_66329} {RNA815_39431}

Mlig455_062894 {REF} {Length: 1299} {Human: ENSG00000135835, KIAA1614, KIAA1614, [Score=65.9, Expect=2e-12]} {Mouse: ENSMUSG00000033722, BC034090, cDNA sequence BC034090, [Score=65.5, Expect=1e-11]} {RNA1310_52162} {RNA815_29678}
6. MligTC455_09896 64 1.33 Mlig455_036651, Mlig455_036677

Neo: -

Age: -

 0.978 - - - - 0.978 -

Mlig455_036651 {REF} {Length: 654} {RNA1310_143507}

Mlig455_036677 {REF} {Length: 1205} {RNA1310_115592}
7. MligTC455_32280 64 1.34 Mlig455_011932, Mlig455_047803, Mlig455_070958, Mlig455_070959

Neo: Germline

Age: Down-Up-Down

Region-enriched R3: 5.180/0.00563

 0.96 - - - - 0.960 -

Mlig455_011932 {REF} {Length: 1608} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=178.0]} {RNA1310_256.1} {RNA815_3111}

Mlig455_047803 {REF} {Length: 2197} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=264.7]} {RNA1310_256.1} {RNA815_3111}

Mlig455_070958 {REF} {Length: 843} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=262.6]; gag-polypeptide of LTR copia-type [PF14223.8, score=151.2]; Integrase core domain [PF00665.28, score=60.8]; GAG-pre-integrase domain [PF13976.8, score=43.6]; Domain of unknown function (DUF4219) [PF13961.8, score=29.0]; Integrase core domain [PF13683.8, score=19.6]} {RNA1310_256.1} {RNA815_3111}

Mlig455_070959 {REF} {Length: 549} {NoTransDecoderORF} {RNA1310_256.1} {RNA815_32599.2}
8. MligTC455_25238 52 1.09 Mlig455_052159, Mlig455_060707

Neo: -

Age: -

 0.955 - - - - 0.955 -

Mlig455_052159 {REF} {Length: 888} {RNA1310_46257} {RNA815_22978}

Mlig455_060707 {REF} {Length: 2582} {RNA1310_46257} {RNA815_22978}
9. MligTC455_31268 95 1.98 Mlig455_058257, Mlig455_070795

Neo: Germline

Age: logFC(26M/2M)=0.453

Region-enriched R4: 4.029/0.01327

 0.955 - - - - 0.955 -

Mlig455_058257 {REF} {Length: 824} {RNA1509_57689} {RNA1310_58670.2} {RNA815_35973}

Mlig455_070795 {REF} {Length: 689} {RNA1509_57689} {RNA1310_58670.1} {RNA815_35973}
10. MligTC455_29474 48 1 Mlig455_037282

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_037282 {REF} {Length: 586} {NoTransDecoderORF} {RNA1509_43957} {RNA1310_26620} {RNA815_37878}
11. MligTC455_19700 179 3.74 Mlig455_039813

Neo: -

Age: -

 GHDC 0.953 - - - - - 0.953 Mlig455_039813 {REF} {Length: 2554} {Pfam: GH3 auxin-responsive promoter [PF03321.15, score=339.6]} {Human: ENSG00000167925, GHDC, GH3 domain containing, [RH, Score=81.3, Expect=2e-15]} {RNA1509_33021, RNA1509_43178, RNA1509_54770} {RNA1310_1835.2, RNA1509_33021, RNA1509_43178, RNA1509_54770} {RNA1509_33021, RNA1509_43178, RNA1509_54770, RNA815_4021}
12. MligTC455_12502 27 0.56 Mlig455_023559, Mlig455_058927

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_023559 {REF} {Length: 239} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32550} {RNA1310_57270} {RNA815_14295}

Mlig455_058927 {REF} {Length: 234} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_57270} {RNA815_14295}
13. MligTC455_12504 13 0.28 Mlig455_018202, Mlig455_037786

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_018202 {REF} {Length: 246} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_43926} {RNA815_14295}

Mlig455_037786 {REF} {Length: 214} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32550} {RNA1310_57270} {RNA815_14295}

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