Data search
Results for MligTC455_41789
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41789 | 1664 | 34.66 | Mlig455_013733 | Neo: - Age: - |
SDR16C5 | Mlig455_013733 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=140.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=95.4]; KR domain [PF08659.12, score=36.2]} {Human: ENSG00000170786, SDR16C5, short chain dehydrogenase/reductase family 16C member 5, [Score=199, Expect=1e-61]; ENSG00000121039, RDH10, retinol dehydrogenase 10, [Score=193, Expect=9e-59]} {Mouse: ENSMUSG00000028236, Sdr16c5, short chain dehydrogenase/reductase family 16C, member 5, [Score=208, Expect=4e-65]; ENSMUSG00000071019, Sdr16c6, short chain dehydrogenase/reductase family 16C, member 6, [Score=201, Expect=3e-62]} {Dmel: FBgn0031630, CG15629, [Score=172, Expect=5e-51]} {Celegans: WBGene00000982, dhs-19, DeHydrogenases, Short chain, [Score=177, Expect=1e-53]} {Smed: dd_Smed_v6_13574_0_6, dd_Smed_v6_13574_0_6, [Score=207, Expect=5e-65]} {RNA1509_31599, RNA1509_31692, RNA1509_48326} {RNA1310_24988, RNA1509_31599, RNA1509_31692, RNA1509_48326} {RNA1509_31599, RNA1509_31692, RNA1509_48326, RNA815_11020.1} |
Cumulative graph for MligTC455_41789
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.026 | 5.354 | 0.97191 | 1.00000 | |
| RegionR2 | -1.347 | 5.354 | 0.00232 | 0.03888 | |
| RegionR3 | 0.349 | 5.354 | 0.28858 | 0.83154 | |
| RegionR4 | 0.263 | 5.354 | 0.50121 | 0.82783 | |
| RegionR5 | 0.843 | 5.354 | 0.00524 | 0.03591 | |
| RegionR6 | 0.649 | 5.354 | 0.04853 | 0.41275 | |
| RegionR7 | -0.408 | 5.354 | 0.32450 | 0.95922 | |
| RegionR8 | -0.323 | 5.354 | 0.50389 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.231 | 5.354 | 0.30430 | 0.99840 | |
| RegenerationR2 | 0.56 | 5.354 | 0.18936 | 0.63337 | |
| RegenerationR3 | -0.08 | 5.354 | 0.84953 | 0.99818 | |
| RegenerationR4 | 0.392 | 5.354 | 0.36271 | 0.78844 | |
| RegenerationR5 | -0.067 | 5.354 | 0.86723 | 1.00000 | |
| RegenerationR6 | -0.505 | 5.354 | 0.22414 | 0.56926 | |
| RegenerationBL | 0.249 | 5.354 | 0.55410 | 0.91035 | |
| RegenerationTP | 0.715 | 5.354 | 0.12513 | 0.53552 |
Genes with expression patterns similar to MligTC455_41789
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41789 | 1664 | 34.66 | Mlig455_013733 | Neo: - Age: - |
SDR16C5 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013733 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=140.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=95.4]; KR domain [PF08659.12, score=36.2]} {Human: ENSG00000170786, SDR16C5, short chain dehydrogenase/reductase family 16C member 5, [Score=199, Expect=1e-61]; ENSG00000121039, RDH10, retinol dehydrogenase 10, [Score=193, Expect=9e-59]} {Mouse: ENSMUSG00000028236, Sdr16c5, short chain dehydrogenase/reductase family 16C, member 5, [Score=208, Expect=4e-65]; ENSMUSG00000071019, Sdr16c6, short chain dehydrogenase/reductase family 16C, member 6, [Score=201, Expect=3e-62]} {Dmel: FBgn0031630, CG15629, [Score=172, Expect=5e-51]} {Celegans: WBGene00000982, dhs-19, DeHydrogenases, Short chain, [Score=177, Expect=1e-53]} {Smed: dd_Smed_v6_13574_0_6, dd_Smed_v6_13574_0_6, [Score=207, Expect=5e-65]} {RNA1509_31599, RNA1509_31692, RNA1509_48326} {RNA1310_24988, RNA1509_31599, RNA1509_31692, RNA1509_48326} {RNA1509_31599, RNA1509_31692, RNA1509_48326, RNA815_11020.1} |
| 2. | MligTC455_32577 | 2160 | 45 | Mlig455_003155 | Neo: - Age: Down-Up-Down |
FAH | 2.482 | 0.798 | 0.731 | - | 0.953 | - | - | Mlig455_003155 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=171.5]; Fumarylacetoacetase N-terminal [PF09298.13, score=115.3]} {Human: ENSG00000103876, FAH, fumarylacetoacetate hydrolase, [RH, Score=622, Expect=0.0]} {Mouse: ENSMUSG00000030630, Fah, fumarylacetoacetate hydrolase, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0016013, Faa, Fumarylacetoacetase, [RH, Score=526, Expect=0.0]} {Celegans: WBGene00019620, fah-1, FumarylAcetoacetate Hydrolase, [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_916_0_2, dd_Smed_v6_916_0_2, [RH, Score=548, Expect=0.0]} {RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676} {RNA1310_6042, RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676} {RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676, RNA815_4884.1} |
| 3. | MligTC455_37094 | 4505 | 93.86 | Mlig455_004071 | Neo: Neoblast Age: - |
YBX3 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_004071 {REF} {Length: 2100} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=91.3]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [RH, Score=154, Expect=6e-45]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [RH, Score=156, Expect=5e-46]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [Score=145, Expect=2e-41]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=148, Expect=4e-44]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=159, Expect=8e-47]} {RNA1509_13488, RNA1509_739} {RNA1310_16468, RNA1509_13488, RNA1509_739} {RNA1509_13488, RNA1509_739, RNA815_7629.1} |
Berezikov Lab - 2020-2021 © ERIBA