Data search
Results for MligTC455_32577
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_32577 | 2160 | 45.00 | Mlig455_003155 | Neo: - Age: Down-Up-Down |
FAH | Mlig455_003155 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=171.5]; Fumarylacetoacetase N-terminal [PF09298.13, score=115.3]} {Human: ENSG00000103876, FAH, fumarylacetoacetate hydrolase, [RH, Score=622, Expect=0.0]} {Mouse: ENSMUSG00000030630, Fah, fumarylacetoacetate hydrolase, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0016013, Faa, Fumarylacetoacetase, [RH, Score=526, Expect=0.0]} {Celegans: WBGene00019620, fah-1, FumarylAcetoacetate Hydrolase, [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_916_0_2, dd_Smed_v6_916_0_2, [RH, Score=548, Expect=0.0]} {RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676} {RNA1310_6042, RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676} {RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676, RNA815_4884.1} |
Cumulative graph for MligTC455_32577
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.127 | 5.681 | 0.86135 | 1.00000 | |
| RegionR2 | -0.79 | 5.681 | 0.04316 | 0.24374 | |
| RegionR3 | 0.26 | 5.681 | 0.38561 | 0.91726 | |
| RegionR4 | -0.091 | 5.681 | 0.79930 | 1.00000 | |
| RegionR5 | 0.928 | 5.681 | 0.00044 | 0.00533 | |
| RegionR6 | 0.199 | 5.681 | 0.51519 | 1.00000 | |
| RegionR7 | -0.436 | 5.681 | 0.25972 | 0.88671 | |
| RegionR8 | 0.057 | 5.681 | 0.90059 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.103 | 5.681 | 0.91714 | 1.00000 | |
| RegenerationR2 | 0.169 | 5.681 | 0.64604 | 0.93424 | |
| RegenerationR3 | 0.259 | 5.681 | 0.48394 | 0.85214 | |
| RegenerationR4 | 0.623 | 5.681 | 0.09465 | 0.47915 | |
| RegenerationR5 | 0.183 | 5.681 | 0.59643 | 0.90881 | |
| RegenerationR6 | 0.782 | 5.681 | 0.02997 | 0.21612 | |
| RegenerationBL | 0.853 | 5.681 | 0.01898 | 0.14853 | |
| RegenerationTP | 0.54 | 5.681 | 0.20873 | 0.65060 |
Genes with expression patterns similar to MligTC455_32577
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_32577 | 2160 | 45 | Mlig455_003155 | Neo: - Age: Down-Up-Down |
FAH | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003155 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=171.5]; Fumarylacetoacetase N-terminal [PF09298.13, score=115.3]} {Human: ENSG00000103876, FAH, fumarylacetoacetate hydrolase, [RH, Score=622, Expect=0.0]} {Mouse: ENSMUSG00000030630, Fah, fumarylacetoacetate hydrolase, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0016013, Faa, Fumarylacetoacetase, [RH, Score=526, Expect=0.0]} {Celegans: WBGene00019620, fah-1, FumarylAcetoacetate Hydrolase, [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_916_0_2, dd_Smed_v6_916_0_2, [RH, Score=548, Expect=0.0]} {RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676} {RNA1310_6042, RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676} {RNA1509_10389, RNA1509_21636, RNA1509_6049, RNA1509_7676, RNA815_4884.1} |
| 2. | MligTC455_32578 | 1609 | 33.52 | Mlig455_003354 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.031/0.00384 |
FAH | 5.626 | 0.950 | 0.931 | 0.846 | 0.978 | 0.994 | 0.927 | Mlig455_003354 {REF} {Length: 2496} {TRANSSPLICED} {Pfam: Fumarylacetoacetate (FAA) hydrolase family [PF01557.20, score=171.5]; Fumarylacetoacetase N-terminal [PF09298.13, score=116.1]} {Human: ENSG00000103876, FAH, fumarylacetoacetate hydrolase, [RH, Score=622, Expect=0.0]} {Mouse: ENSMUSG00000030630, Fah, fumarylacetoacetate hydrolase, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0016013, Faa, Fumarylacetoacetase, [RH, Score=525, Expect=0.0]} {Celegans: WBGene00019620, fah-1, FumarylAcetoacetate Hydrolase, [RH, Score=566, Expect=0.0]} {Smed: dd_Smed_v6_916_0_2, dd_Smed_v6_916_0_2, [RH, Score=549, Expect=0.0]} {RNA1509_7676} {RNA1310_6042} {RNA815_4884.1} |
| 3. | MligTC455_24251 | 4643 | 96.72 | Mlig455_000145 | Neo: - Age: Down-Down-Up Region-enriched R4: 1.542/0.00021 Regeneration-upregulated BL: 1.281 Regeneration-enriched BL: 1.281 |
HSPE1 | 3.371 | 0.803 | - | - | 0.882 | 0.983 | 0.703 | Mlig455_000145 {REF} {Length: 694} {TRANSSPLICED} {Pfam: Chaperonin 10 Kd subunit [PF00166.23, score=88.7]} {Human: ENSG00000115541, HSPE1, heat shock protein family E (Hsp10) member 1, [RH, Score=121, Expect=1e-36]} {Mouse: ENSMUSG00000073676, Hspe1, heat shock protein 1 (chaperonin 10), [RH, Score=122, Expect=5e-37]; ENSMUSG00000117621, AC117239.2, novel protein similar to Hspe1, [RH, Score=119, Expect=8e-36]} {Dmel: FBgn0036334, CG11267, [RH, Score=115, Expect=9e-35]} {Celegans: WBGene00021248, Y22D7AL.10, [RH, Score=117, Expect=2e-35]} {Smed: dd_Smed_v6_421_0_1, dd_Smed_v6_421_0_1, [RH, Score=124, Expect=2e-38]} {RNA1509_1412, RNA1509_17704} {RNA1310_51233.2, RNA1509_1412, RNA1509_17704} {RNA1509_1412, RNA1509_17704, RNA815_25861} |
| 4. | MligTC455_49668 | 7165 | 149.26 | Mlig455_041532, Mlig455_069392 | Neo: - Age: logFC(26M/2M)=0.412 Region-enriched R6: 2.891/0.00000 |
2.72 | - | - | - | 0.859 | 0.951 | 0.910 | Mlig455_041532 {REF} {Length: 1250} {Pfam: Thioredoxin [PF00085.22, score=32.4]} {RNA1509_12738} {RNA1310_35985.2} {RNA815_17683} Mlig455_069392 {REF} {Length: 1250} {Pfam: Thioredoxin [PF00085.22, score=32.4]} {RNA1509_12738, RNA1509_17914, RNA1509_46388} {RNA1310_35985.2, RNA1509_12738, RNA1509_17914, RNA1509_46388} {RNA1509_12738, RNA1509_17914, RNA1509_46388, RNA815_17683} |
|
| 5. | MligTC455_24252 | 4573 | 95.27 | Mlig455_067732 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.496/0.00030 Regeneration-upregulated BL: 1.393 Regeneration-enriched BL: 1.393 |
HSPE1 | 2.665 | 0.805 | - | - | 0.872 | 0.988 | - | Mlig455_067732 {REF} {Length: 695} {TRANSSPLICED} {Pfam: Chaperonin 10 Kd subunit [PF00166.23, score=87.4]} {Human: ENSG00000115541, HSPE1, heat shock protein family E (Hsp10) member 1, [RH, Score=119, Expect=1e-35]} {Mouse: ENSMUSG00000073676, Hspe1, heat shock protein 1 (chaperonin 10), [RH, Score=119, Expect=5e-36]; ENSMUSG00000117621, AC117239.2, novel protein similar to Hspe1, [RH, Score=116, Expect=7e-35]} {Dmel: FBgn0036334, CG11267, [RH, Score=113, Expect=8e-34]} {Celegans: WBGene00021248, Y22D7AL.10, [RH, Score=115, Expect=1e-34]} {Smed: dd_Smed_v6_421_0_1, dd_Smed_v6_421_0_1, [RH, Score=122, Expect=1e-37]} {RNA1509_17704} {RNA1310_51233.2} {RNA815_25861} |
| 6. | MligTC455_23317 | 6386 | 133.04 | Mlig455_030502 | Neo: - Age: logFC(26M/2M)=0.152 |
IFI30 | 2.487 | - | - | 0.826 | 0.960 | - | 0.701 | Mlig455_030502 {REF} {Length: 1804} {Pfam: Gamma interferon inducible lysosomal thiol reductase (GILT) [PF03227.18, score=106.5]; Saposin A-type domain [PF02199.17, score=21.0]} {Human: ENSG00000216490, IFI30, IFI30, lysosomal thiol reductase, [RH, Score=142, Expect=1e-40]} {Mouse: ENSMUSG00000110777, Ifi30, interferon gamma inducible protein 30, [Score=114, Expect=4e-30]} {Dmel: FBgn0038149, GILT1, Gamma-interferon-inducible lysosomal thiol reductase 1, [RH, Score=103, Expect=2e-26]} {Celegans: WBGene00009514, F37H8.5, GILT-like protein F37H8.5, [RH, Score=110, Expect=1e-28]} {Smed: dd_Smed_v6_2024_0_1, dd_Smed_v6_2024_0_1, [RH, Score=129, Expect=1e-36]} {RNA1509_1665, RNA1509_42982, RNA1509_8932} {RNA1310_6680.2, RNA1509_1665, RNA1509_42982} {RNA1509_1665, RNA1509_42982, RNA815_10821.1} |
| 7. | MligTC455_41789 | 1664 | 34.66 | Mlig455_013733 | Neo: - Age: - |
SDR16C5 | 2.482 | 0.798 | 0.731 | - | 0.953 | - | - | Mlig455_013733 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=140.8]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=95.4]; KR domain [PF08659.12, score=36.2]} {Human: ENSG00000170786, SDR16C5, short chain dehydrogenase/reductase family 16C member 5, [Score=199, Expect=1e-61]; ENSG00000121039, RDH10, retinol dehydrogenase 10, [Score=193, Expect=9e-59]} {Mouse: ENSMUSG00000028236, Sdr16c5, short chain dehydrogenase/reductase family 16C, member 5, [Score=208, Expect=4e-65]; ENSMUSG00000071019, Sdr16c6, short chain dehydrogenase/reductase family 16C, member 6, [Score=201, Expect=3e-62]} {Dmel: FBgn0031630, CG15629, [Score=172, Expect=5e-51]} {Celegans: WBGene00000982, dhs-19, DeHydrogenases, Short chain, [Score=177, Expect=1e-53]} {Smed: dd_Smed_v6_13574_0_6, dd_Smed_v6_13574_0_6, [Score=207, Expect=5e-65]} {RNA1509_31599, RNA1509_31692, RNA1509_48326} {RNA1310_24988, RNA1509_31599, RNA1509_31692, RNA1509_48326} {RNA1509_31599, RNA1509_31692, RNA1509_48326, RNA815_11020.1} |
| 8. | MligTC455_41779 | 1714 | 35.71 | Mlig455_047512 | Neo: Neoblast, stringent Age: Up-Down-Up Region-enriched R5: 1.190/0.00563 |
DKC1 | 2.421 | - | - | 0.707 | 0.965 | 0.749 | - | Mlig455_047512 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: DKCLD (NUC011) domain [PF08068.14, score=108.8]; TruB family pseudouridylate synthase (N terminal domain) [PF01509.20, score=74.9]; tRNA pseudouridylate synthase B C-terminal domain [PF16198.7, score=60.8]; PUA domain [PF01472.22, score=56.9]} {Human: ENSG00000130826, DKC1, dyskerin pseudouridine synthase 1, [Score=542, Expect=0.0]} {Mouse: ENSMUSG00000031403, Dkc1, dyskeratosis congenita 1, dyskerin, [Score=543, Expect=0.0]} {Dmel: FBgn0259937, Nop60B, Nucleolar protein at 60B, [Score=571, Expect=0.0]} {Celegans: WBGene00010478, K01G5.5, Putative H/ACA ribonucleoprotein complex subunit 4, [Score=514, Expect=0.0]} {Smed: dd_Smed_v6_4087_0_1, dd_Smed_v6_4087_0_1, [Score=440, Expect=7e-153]} {RNA1509_2479} {RNA1310_14344.1} {RNA815_5205} |
| 9. | MligTC455_35851 | 84 | 1.74 | Mlig455_060481 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_060481 {REF} {Length: 2116} {RNA1509_15445} {RNA1310_19911} {RNA815_6089} | |
| 10. | MligTC455_34701 | 5732 | 119.42 | Mlig455_044421, Mlig455_044456, Mlig455_046748 | Neo: - Age: - |
ABAT | 0.95 | - | - | - | 0.950 | - | - | Mlig455_044421 {REF} {Length: 2235} {Pfam: Aminotransferase class-III [PF00202.23, score=330.6]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [RH, Score=497, Expect=5e-173]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [RH, Score=491, Expect=7e-171]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [RH, Score=461, Expect=2e-159]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_15533, RNA1509_4088, RNA1509_40896} {RNA1310_12178, RNA1509_4088, RNA1509_40896} {RNA1509_4088, RNA1509_40896, RNA815_4296} Mlig455_044456 {REF} {Length: 2252} {Pfam: Aminotransferase class-III [PF00202.23, score=332.7]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [RH, Score=498, Expect=5e-173]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [RH, Score=491, Expect=7e-171]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [RH, Score=532, Expect=0.0]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [RH, Score=461, Expect=1e-159]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [RH, Score=529, Expect=0.0]} {RNA1509_39024, RNA1509_58685} {RNA1310_12178, RNA1509_39024, RNA1509_58685} {RNA1509_39024, RNA1509_58685, RNA815_4296} Mlig455_046748 {REF} {Length: 2206} {Pfam: Aminotransferase class-III [PF00202.23, score=248.5]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [Score=398, Expect=9e-136]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [Score=397, Expect=2e-135]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [Score=426, Expect=5e-147]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [Score=389, Expect=5e-133]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [Score=431, Expect=1e-149]} {RNA1509_15533, RNA1509_20161, RNA1509_39024} {RNA1310_12178, RNA1509_15533, RNA1509_20161} {RNA1509_15533, RNA1509_20161, RNA815_4296} |
Berezikov Lab - 2020-2021 © ERIBA