TomoSeq data search

Data search

Results for MligTC455_41812

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41812

792

16.50

Mlig455_050622

Neo: -

Age: -

ZFAND6

Mlig455_050622 {REF} {Length: 3048} {TRANSSPLICED} {Pfam: AN1-like Zinc finger [PF01428.18, score=42.6]; A20-like zinc finger [PF01754.18, score=35.6]} {Human: ENSG00000086666, ZFAND6, zinc finger AN1-type containing 6, [Score=136, Expect=3e-40]; ENSG00000107372, ZFAND5, zinc finger AN1-type containing 5, [Score=132, Expect=2e-38]} {Mouse: ENSMUSG00000030629, Zfand6, zinc finger, AN1-type domain 6, [Score=129, Expect=5e-37]; ENSMUSG00000024750, Zfand5, zinc finger, AN1-type domain 5, [Score=125, Expect=5e-36]} {Dmel: FBgn0266410, CG45050, [Score=135, Expect=5e-40]} {Celegans: WBGene00009050, F22D6.2, [Score=128, Expect=2e-37]} {Smed: dd_Smed_v6_2038_0_1, dd_Smed_v6_2038_0_1, [Score=130, Expect=2e-38]} {RNA1509_21336, RNA1509_43126, RNA1509_9781} {RNA1310_37347.1, RNA1509_43126, RNA1509_9781} {RNA1509_43126, RNA1509_9781, RNA815_15103}

Cumulative graph for MligTC455_41812

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.843	4.344	0.44384	1.00000
RegionR2	0.66	4.344	0.14093	0.46710
RegionR3	0.266	4.344	0.46405	0.97289
RegionR4	0.559	4.344	0.18525	0.45770
RegionR5	0.491	4.344	0.13650	0.37836
RegionR6	0.153	4.344	0.68270	1.00000
RegionR7	-0.748	4.344	0.14743	0.71456
RegionR8	-0.54	4.344	0.35384	0.98754

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.293	4.344	0.16815	0.91014
RegenerationR2	0.035	4.344	0.92281	1.00000
RegenerationR3	0.074	4.344	0.85751	1.00000
RegenerationR4	0.29	4.344	0.48690	0.86258
RegenerationR5	0.558	4.344	0.13366	0.54174
RegenerationR6	0.01	4.344	0.98147	1.00000
RegenerationBL	1	4.344	0.03922	0.22447
RegenerationTP	0.605	4.344	0.27863	0.72615

Genes with expression patterns similar to MligTC455_41812

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41812	792	16.5	Mlig455_050622	Neo: - Age: -	ZFAND6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050622 {REF} {Length: 3048} {TRANSSPLICED} {Pfam: AN1-like Zinc finger [PF01428.18, score=42.6]; A20-like zinc finger [PF01754.18, score=35.6]} {Human: ENSG00000086666, ZFAND6, zinc finger AN1-type containing 6, [Score=136, Expect=3e-40]; ENSG00000107372, ZFAND5, zinc finger AN1-type containing 5, [Score=132, Expect=2e-38]} {Mouse: ENSMUSG00000030629, Zfand6, zinc finger, AN1-type domain 6, [Score=129, Expect=5e-37]; ENSMUSG00000024750, Zfand5, zinc finger, AN1-type domain 5, [Score=125, Expect=5e-36]} {Dmel: FBgn0266410, CG45050, [Score=135, Expect=5e-40]} {Celegans: WBGene00009050, F22D6.2, [Score=128, Expect=2e-37]} {Smed: dd_Smed_v6_2038_0_1, dd_Smed_v6_2038_0_1, [Score=130, Expect=2e-38]} {RNA1509_21336, RNA1509_43126, RNA1509_9781} {RNA1310_37347.1, RNA1509_43126, RNA1509_9781} {RNA1509_43126, RNA1509_9781, RNA815_15103}
2.	MligTC455_32342	680	14.16	Mlig455_013465	Neo: Int S/G2/M Age: - Region-enriched R4: 1.913/0.00241	EIF2AK1	1.696	-	-	-	0.739	0.957	-	Mlig455_013465 {REF} {Length: 4319} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=146.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=88.8]} {Human: ENSG00000086232, EIF2AK1, eukaryotic translation initiation factor 2 alpha kinase 1, [RH, Score=177, Expect=6e-47]} {Mouse: ENSMUSG00000029613, Eif2ak1, eukaryotic translation initiation factor 2 alpha kinase 1, [RH, Score=139, Expect=5e-34]} {Dmel: FBgn0037327, PEK, pancreatic eIF-2alpha kinase, [Score=165, Expect=4e-42]} {Celegans: WBGene00003970, pek-1, Eukaryotic translation initiation factor 2-alpha kinase pek-1, [Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_8210_0_1, dd_Smed_v6_8210_0_1, [Score=142, Expect=1e-34]} {RNA1509_13116, RNA1509_17895, RNA1509_33519, RNA1509_48018} {RNA1310_9794.1, RNA1509_13116, RNA1509_17895, RNA1509_33519, RNA1509_48018} {RNA1509_13116, RNA1509_17895, RNA1509_33519, RNA1509_48018, RNA815_2641}
3.	MligTC455_12872	149	3.1	Mlig455_057561	Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 1.624/0.04283		1.668	-	-	-	-	0.955	0.713	Mlig455_057561 {REF} {Length: 1130} {RNA1509_29400} {RNA1310_15529} {RNA815_14251}
4.	MligTC455_43292	603	12.56	Mlig455_043465	Neo: - Age: logFC(26M/2M)=0.315	HID1	0.965	-	-	-	-	-	0.965	Mlig455_043465 {REF} {Length: 5057} {Pfam: High-temperature-induced dauer-formation protein [PF12722.9, score=924.3]; Dyggve-Melchior-Clausen syndrome protein [PF09742.11, score=753.7]; Protein of unknown function (DUF2722) [PF10846.10, score=19.9]} {Human: ENSG00000167861, HID1, HID1 domain containing, [RH, Score=1105, Expect=0.0]} {Mouse: ENSMUSG00000034586, Hid1, HID1 domain containing, [RH, Score=1106, Expect=0.0]} {Dmel: FBgn0033713, CG8841, [RH, Score=1028, Expect=0.0]} {Celegans: WBGene00001844, hid-1, HID-1; High temperature-Induced Dauer formation, [RH, Score=829, Expect=0.0]} {Smed: dd_Smed_v6_4543_0_1, dd_Smed_v6_4543_0_1, [RH, Score=1009, Expect=0.0]} {RNA1509_22998, RNA1509_52413} {RNA1310_2060, RNA1509_52413} {RNA1509_52413, RNA815_13082.1}
5.	MligTC455_19385	697	14.52	Mlig455_002522	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.784 Region-enriched R5: 1.484/0.00022		0.963	-	-	0.963	-	-	-	Mlig455_002522 {REF} {Length: 1876} {TRANSSPLICED} {Pfam: LicD family [PF04991.15, score=40.9]} {Smed: dd_Smed_v6_22425_0_1, dd_Smed_v6_22425_0_1, [RH, Score=88.6, Expect=5e-21]} {RNA1509_10983} {RNA1310_12379} {RNA815_6424.1}
6.	MligTC455_22672	428	8.92	Mlig455_040076	Neo: - Age: Down-Up-Up		0.963	-	-	-	-	0.963	-	Mlig455_040076 {REF} {Length: 1708} {RNA1509_55358} {RNA1310_8394} {RNA815_1882}
7.	MligTC455_28761	361	7.53	Mlig455_038401, Mlig455_038605	Neo: Irradiation Age: -	RRP12	0.96	-	-	-	-	0.960	-	Mlig455_038401 {REF} {Length: 5091} {TRANSSPLICED} {Pfam: NUC173 domain [PF08161.14, score=127.7]} {Human: ENSG00000052749, RRP12, ribosomal RNA processing 12 homolog, [RH, Score=345, Expect=4e-98]} {Mouse: ENSMUSG00000035049, Rrp12, ribosomal RNA processing 12 homolog (S. cerevisiae), [RH, Score=356, Expect=4e-102]} {Dmel: FBgn0030504, CG2691, [RH, Score=238, Expect=2e-63]} {Celegans: WBGene00021595, Y46E12BL.2, [RH, Score=181, Expect=6e-46]} {RNA1509_40887, RNA1509_43476, RNA1509_47958, RNA1509_49995, RNA1509_5642} {RNA1310_1820, RNA1509_40887, RNA1509_43476, RNA1509_47958, RNA1509_49995, RNA1509_5642} {RNA1509_40887, RNA1509_43476, RNA1509_47958, RNA1509_49995, RNA1509_5642, RNA815_294.1} Mlig455_038605 {REF} {Length: 5210} {TRANSSPLICED} {Pfam: NUC173 domain [PF08161.14, score=126.9]} {Human: ENSG00000052749, RRP12, ribosomal RNA processing 12 homolog, [RH, Score=343, Expect=1e-97]} {Mouse: ENSMUSG00000035049, Rrp12, ribosomal RNA processing 12 homolog (S. cerevisiae), [RH, Score=354, Expect=2e-101]} {Dmel: FBgn0030504, CG2691, [RH, Score=239, Expect=9e-64]} {Celegans: WBGene00021595, Y46E12BL.2, [RH, Score=184, Expect=6e-47]} {RNA1509_5642} {RNA1310_1820} {RNA815_294.1}
8.	MligTC455_19386	749	15.6	Mlig455_002646	Neo: - Age: - Region-enriched R5: 1.206/0.00084		0.955	-	-	0.955	-	-	-	Mlig455_002646 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: LicD family [PF04991.15, score=40.1]} {Smed: dd_Smed_v6_22425_0_1, dd_Smed_v6_22425_0_1, [RH, Score=86.7, Expect=2e-20]} {RNA1509_10983, RNA1509_45106, RNA1509_54854} {RNA1310_12379, RNA1509_10983, RNA1509_45106, RNA1509_54854} {RNA1509_10983, RNA1509_45106, RNA1509_54854, RNA815_6424.1}
9.	MligTC455_27928	517	10.77	Mlig455_001032	Neo: - Age: -	STK36	0.955	-	-	0.955	-	-	-	Mlig455_001032 {REF} {Length: 5142} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=247.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=142.7]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]; HEAT repeat [PF02985.24, score=22.1]; Kinase-like [PF14531.8, score=20.6]} {Human: ENSG00000163482, STK36, serine/threonine kinase 36, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000033276, Stk36, serine/threonine kinase 36, [RH, Score=591, Expect=0.0]} {Dmel: FBgn0001079, fu, fused, [RH, Score=290, Expect=1e-82]} {Celegans: WBGene00004789, sgk-1, Serine/threonine-protein kinase sgk-1, [Score=168, Expect=1e-44]} {Smed: dd_Smed_v6_11067_0_1, dd_Smed_v6_11067_0_1, [RH, Score=765, Expect=0.0]} {RNA1509_5397} {RNA1310_7915.1, RNA1509_5397} {RNA1509_5397, RNA815_4145}
10.	MligTC455_30116	31	0.64	Mlig455_036790, Mlig455_036796	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_036790 {REF} {Length: 276} {NoTransDecoderORF} {RNA1509_14197} {RNA1310_72465} {RNA815_3035.2} Mlig455_036796 {REF} {Length: 276} {NoTransDecoderORF} {RNA1509_14197} {RNA1310_72465} {RNA815_3035.2}
11.	MligTC455_14474	4337	90.35	Mlig455_040064	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_040064 {REF} {Length: 567} {NoTransDecoderORF} {RNA1509_12533} {RNA1310_13559.1} {RNA815_5097.1}
12.	MligTC455_06389	248	5.17	Mlig455_062731	Neo: Irradiation Age: -		0.952	-	-	-	-	0.952	-	Mlig455_062731 {REF} {Length: 2658} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=91.4]; Dimerisation domain of Zinc Transporter [PF16916.7, score=47.7]} {Celegans: WBGene00019841, R02F11.3, [Score=241, Expect=1e-73]} {Smed: dd_Smed_v6_12060_0_1, dd_Smed_v6_12060_0_1, [Score=263, Expect=6e-83]} {RNA1509_18492, RNA1509_47762} {RNA1310_16753.1, RNA1509_18492, RNA1509_47762} {RNA1509_18492, RNA1509_47762, RNA815_8375}
13.	MligTC455_44292	961	20.02	Mlig455_001013, Mlig455_002282, Mlig455_030533	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_001013 {REF} {Length: 96} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_43806} {RNA815_10767} Mlig455_002282 {REF} {Length: 96} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_43806} {RNA815_10767} Mlig455_030533 {REF} {Length: 111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_43357} {RNA815_10767}
14.	MligTC455_49511	324	6.76	Mlig455_001161	Neo: - Age: Down-Up-Down		0.952	-	-	-	-	0.952	-	Mlig455_001161 {REF} {Length: 2299} {TRANSSPLICED} {RNA1509_17368, RNA1509_8645} {RNA1310_12470, RNA1509_17368, RNA1509_8645} {RNA1509_17368, RNA1509_8645, RNA815_9297.1}
15.	MligTC455_52167	419	8.72	Mlig455_067215	Neo: - Age: Up-Down-Down		0.952	-	-	-	-	0.952	-	Mlig455_067215 {REF} {Length: 4732} {RNA1509_33063, RNA1509_35019} {RNA1310_9117, RNA1509_33063} {RNA1509_33063, RNA815_9999}
16.	MligTC455_20415	634	13.21	Mlig455_001927	Neo: Neoblast Age: Up-Down-Up, logFC(26M/2M)=0.445		0.951	-	-	-	-	-	0.951	Mlig455_001927 {REF} {Length: 1432} {RNA1509_28123, RNA1509_35836, RNA1509_58398} {RNA1310_7045.1, RNA1509_28123, RNA1509_35836, RNA1509_58398} {RNA1509_28123, RNA1509_35836, RNA1509_58398, RNA815_19745}

Berezikov Lab - 2020-2021 © ERIBA