TomoSeq data search

Data search

Results for MligTC455_52167

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52167

419

8.72

Mlig455_067215

Neo: -

Age: Up-Down-Down

Mlig455_067215 {REF} {Length: 4732} {RNA1509_33063, RNA1509_35019} {RNA1310_9117, RNA1509_33063} {RNA1509_33063, RNA815_9999}

Cumulative graph for MligTC455_52167

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.428	3.383	0.69621	1.00000
RegionR2	0.017	3.383	0.97039	1.00000
RegionR3	-0.275	3.383	0.53547	1.00000
RegionR4	-0.25	3.383	0.60918	0.92074
RegionR5	-0.107	3.383	0.78081	1.00000
RegionR6	-0.117	3.383	0.79435	1.00000
RegionR7	-0.571	3.383	0.37473	1.00000
RegionR8	0.874	3.383	0.17552	0.75433

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.573	3.383	0.13055	0.86315
RegenerationR2	0.35	3.383	0.45086	0.84732
RegenerationR3	0.508	3.383	0.32854	0.75463
RegenerationR4	0.042	3.383	0.93054	1.00000
RegenerationR5	0.471	3.383	0.30662	0.73359
RegenerationR6	0.509	3.383	0.33728	0.68363
RegenerationBL	0.112	3.383	0.86277	1.00000
RegenerationTP	0.455	3.383	0.47886	0.88738

Genes with expression patterns similar to MligTC455_52167

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52167	419	8.72	Mlig455_067215	Neo: - Age: Up-Down-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_067215 {REF} {Length: 4732} {RNA1509_33063, RNA1509_35019} {RNA1310_9117, RNA1509_33063} {RNA1509_33063, RNA815_9999}
2.	MligTC455_53565	193	4.01	Mlig455_062595	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R4: 2.981/0.00018		0.973	-	-	0.973	-	-	-	Mlig455_062595 {REF} {Length: 5130} {TRANSSPLICED} {RNA1509_6709} {RNA1310_37517} {RNA815_23743}
3.	MligTC455_10001	167	3.49	Mlig455_002855	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.498	ZC3H6	0.972	-	-	0.972	-	-	-	Mlig455_002855 {REF} {Length: 3455} {Pfam: Zinc finger domain [PF18345.3, score=39.5]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=31.1]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=26.7]; CCCH-type zinc finger [PF18044.3, score=22.3]} {Human: ENSG00000188177, ZC3H6, zinc finger CCCH-type containing 6, [Score=115, Expect=2e-26]} {Mouse: ENSMUSG00000042851, Zc3h6, zinc finger CCCH type containing 6, [Score=116, Expect=6e-27]} {Dmel: FBgn0003575, su(sable), suppressor of sable, [Score=62.8, Expect=6e-10]} {Celegans: WBGene00020827, T26A8.4, [RH, Score=82.0, Expect=2e-16]} {Smed: dd_Smed_v6_6243_0_1, dd_Smed_v6_6243_0_1, [Score=85.9, Expect=2e-17]} {RNA1509_56614} {RNA1310_22002, RNA1509_56614} {RNA1509_56614, RNA815_14168}
4.	MligTC455_28007	1409	29.35	Mlig455_001316	Neo: - Age: -	SQOR	0.958	-	-	-	-	0.958	-	Mlig455_001316 {REF} {Length: 1967} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=70.5]; FAD-NAD(P)-binding [PF13454.8, score=20.3]} {Human: ENSG00000137767, SQOR, sulfide quinone oxidoreductase, [RH, Score=416, Expect=1e-142]} {Mouse: ENSMUSG00000005803, Sqor, sulfide quinone oxidoreductase, [RH, Score=397, Expect=1e-135]} {Dmel: FBgn0035515, CG14997, [RH, Score=387, Expect=1e-131]} {Celegans: WBGene00008538, sqrd-1, Sulfide Quinone oxidoReDuctase, [RH, Score=350, Expect=1e-117]} {Smed: dd_Smed_v6_4215_0_1, dd_Smed_v6_4215_0_1, [RH, Score=440, Expect=6e-153]} {RNA1509_26256} {RNA1310_11214} {RNA815_2609}
5.	MligTC455_10406	146	3.04	Mlig455_067861	Neo: - Age: -	RAC1	0.956	-	-	0.956	-	-	-	Mlig455_067861 {REF} {Length: 1384} {Pfam: Ras family [PF00071.24, score=172.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.6]; ADP-ribosylation factor family [PF00025.23, score=31.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=274, Expect=7e-94]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=271, Expect=9e-93]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=274, Expect=5e-94]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=269, Expect=3e-92]} {Dmel: FBgn0010333, Rac1, [Score=270, Expect=6e-93]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=271, Expect=3e-93]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=258, Expect=4e-88]} {RNA1310_27386.1} {RNA815_17940}
6.	MligTC455_25188	578	12.04	Mlig455_003079	Neo: - Age: Up-Down-Up	FNIP2	0.953	-	-	-	-	0.953	-	Mlig455_003079 {REF} {Length: 6311} {TRANSSPLICED} {Pfam: Folliculin-interacting protein middle domain [PF14637.8, score=133.2]; Folliculin-interacting protein C-terminus [PF14638.8, score=83.7]; Folliculin-interacting protein N-terminus [PF14636.8, score=46.5]} {Human: ENSG00000052795, FNIP2, folliculin interacting protein 2, [RH, Score=107, Expect=5e-23]; ENSG00000217128, FNIP1, folliculin interacting protein 1, [RH, Score=103, Expect=7e-22]} {Mouse: ENSMUSG00000061175, Fnip2, folliculin interacting protein 2, [RH, Score=110, Expect=4e-24]; ENSMUSG00000035992, Fnip1, folliculin interacting protein 1, [RH, Score=105, Expect=2e-22]} {Dmel: FBgn0036684, CG3764, [RH, Score=89.4, Expect=1e-17]} {Smed: dd_Smed_v6_5866_0_2, dd_Smed_v6_5866_0_2, [RH, Score=81.6, Expect=1e-15]} {RNA1509_12160, RNA1509_40998, RNA1509_49550, RNA1509_55409, RNA1509_57930} {RNA1310_4135.1, RNA1509_12160, RNA1509_40998, RNA1509_49550, RNA1509_55409, RNA1509_57930} {RNA1509_12160, RNA1509_40998, RNA1509_49550, RNA1509_55409, RNA1509_57930, RNA815_10342}
7.	MligTC455_41812	792	16.5	Mlig455_050622	Neo: - Age: -	ZFAND6	0.952	-	-	-	-	0.952	-	Mlig455_050622 {REF} {Length: 3048} {TRANSSPLICED} {Pfam: AN1-like Zinc finger [PF01428.18, score=42.6]; A20-like zinc finger [PF01754.18, score=35.6]} {Human: ENSG00000086666, ZFAND6, zinc finger AN1-type containing 6, [Score=136, Expect=3e-40]; ENSG00000107372, ZFAND5, zinc finger AN1-type containing 5, [Score=132, Expect=2e-38]} {Mouse: ENSMUSG00000030629, Zfand6, zinc finger, AN1-type domain 6, [Score=129, Expect=5e-37]; ENSMUSG00000024750, Zfand5, zinc finger, AN1-type domain 5, [Score=125, Expect=5e-36]} {Dmel: FBgn0266410, CG45050, [Score=135, Expect=5e-40]} {Celegans: WBGene00009050, F22D6.2, [Score=128, Expect=2e-37]} {Smed: dd_Smed_v6_2038_0_1, dd_Smed_v6_2038_0_1, [Score=130, Expect=2e-38]} {RNA1509_21336, RNA1509_43126, RNA1509_9781} {RNA1310_37347.1, RNA1509_43126, RNA1509_9781} {RNA1509_43126, RNA1509_9781, RNA815_15103}
8.	MligTC455_11394	838	17.46	Mlig455_041167, Mlig455_070088	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.206	NRDC	0.95	-	-	0.950	-	-	-	Mlig455_041167 {REF} {Length: 4074} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=178.7]; Insulinase (Peptidase family M16) [PF00675.22, score=110.6]; Peptidase M16 inactive domain [PF05193.23, score=56.6]} {Human: ENSG00000078618, NRDC, nardilysin convertase, [RH, Score=452, Expect=4e-140]} {Mouse: ENSMUSG00000053510, Nrd1, nardilysin, N-arginine dibasic convertase, NRD convertase 1, [RH, Score=457, Expect=2e-141]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [RH, Score=360, Expect=4e-106]} {Celegans: WBGene00013492, Y70C5C.1, [Score=265, Expect=7e-74]} {Smed: dd_Smed_v6_5554_0_1, dd_Smed_v6_5554_0_1, [RH, Score=490, Expect=5e-156]} {RNA1509_34049, RNA1509_54117, RNA1509_9046} {RNA1310_1454.1, RNA1509_34049, RNA1509_54117} {RNA1509_34049, RNA1509_54117, RNA815_766.1} Mlig455_070088 {REF} {Length: 4337} {Pfam: Middle or third domain of peptidase_M16 [PF16187.7, score=178.9]; Insulinase (Peptidase family M16) [PF00675.22, score=110.6]; Peptidase M16 inactive domain [PF05193.23, score=59.0]} {Human: ENSG00000078618, NRDC, nardilysin convertase, [Score=452, Expect=1e-139]} {Mouse: ENSMUSG00000053510, Nrd1, nardilysin, N-arginine dibasic convertase, NRD convertase 1, [RH, Score=453, Expect=3e-139]} {Dmel: FBgn0030344, Nrd1, Nardilysin, [RH, Score=360, Expect=6e-106]} {Celegans: WBGene00013492, Y70C5C.1, [Score=259, Expect=6e-72]} {Smed: dd_Smed_v6_5554_0_1, dd_Smed_v6_5554_0_1, [RH, Score=494, Expect=2e-157]} {RNA1509_13992, RNA1509_9046} {RNA1310_1454.1, RNA1509_13992, RNA1509_9046} {RNA1509_13992, RNA1509_9046, RNA815_766.1}

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