Data search


search
Exact
Search

Results for MligTC455_41859

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41859 88 1.84 Mlig455_032062

Neo: -

Age: -

AL096814.1 Mlig455_032062 {REF} {Length: 1148} {Human: ENSG00000214732, AL096814.1, novel protein, [RH, Score=49.3, Expect=1e-07]} {Mouse: ENSMUSG00000116001, 1700001C19Rik, RIKEN cDNA 1700001C19 gene, [RH, Score=48.9, Expect=1e-07]; ENSMUSG00000047150, 1700001C19Rik, RIKEN cDNA 1700001C19 gene, [RH, Score=48.9, Expect=1e-07]} {RNA1509_35528} {RNA1310_98405} {RNA815_20810}

Cumulative graph for MligTC455_41859

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.214 1.67 0.41584 1.00000
RegionR2 -0.646 1.67 0.97118 1.00000
RegionR3 0.725 1.67 0.45860 0.96837
RegionR4 -0.129 1.67 0.91045 1.00000
RegionR5 0.481 1.67 0.61730 0.97353
RegionR6 0.812 1.67 0.41815 0.98606
RegionR7 0.412 1.67 0.71212 1.00000
RegionR8 2.558 1.67 0.02396 0.30174

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.488 1.67 1.00000 1.00000
RegenerationR2 -0.13 1.67 0.86253 1.00000
RegenerationR3 -1.01 1.67 0.20295 0.63822
RegenerationR4 0.194 1.67 0.80279 0.98723
RegenerationR5 -0.912 1.67 0.24855 0.68228
RegenerationR6 -0.921 1.67 0.27116 0.62141
RegenerationBL -2.336 1.67 0.06415 0.29427
RegenerationTP -0.358 1.67 0.70315 1.00000


Genes with expression patterns similar to MligTC455_41859

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41859 88 1.84 Mlig455_032062

Neo: -

Age: -

AL096814.1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_032062 {REF} {Length: 1148} {Human: ENSG00000214732, AL096814.1, novel protein, [RH, Score=49.3, Expect=1e-07]} {Mouse: ENSMUSG00000116001, 1700001C19Rik, RIKEN cDNA 1700001C19 gene, [RH, Score=48.9, Expect=1e-07]; ENSMUSG00000047150, 1700001C19Rik, RIKEN cDNA 1700001C19 gene, [RH, Score=48.9, Expect=1e-07]} {RNA1509_35528} {RNA1310_98405} {RNA815_20810}
2. MligTC455_16778 196 4.07 Mlig455_000354

Neo: -

Age: -

PRB3 1.842 - 0.968 - 0.874 - - Mlig455_000354 {REF} {Length: 2874} {Pfam: WH2 motif [PF02205.22, score=36.7]} {Human: ENSG00000197870, PRB3, proline rich protein BstNI subfamily 3, [RH, Score=56.2, Expect=6e-08]; ENSG00000275624, PRB3, proline rich protein BstNI subfamily 3, [RH, Score=56.2, Expect=6e-08]} {RNA1310_25422} {RNA815_34565}
3. MligTC455_24819 172 3.59 Mlig455_019041

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.498

ETS2 1.75 - 0.953 - - - 0.797 Mlig455_019041 {REF} {Length: 7155} {Pfam: Ets-domain [PF00178.24, score=111.3]} {Human: ENSG00000157557, ETS2, ETS proto-oncogene 2, transcription factor, [RH, Score=156, Expect=2e-42]; ENSG00000134954, ETS1, ETS proto-oncogene 1, transcription factor, [RH, Score=150, Expect=1e-40]} {Mouse: ENSMUSG00000022895, Ets2, E26 avian leukemia oncogene 2, 3' domain, [RH, Score=156, Expect=1e-42]; ENSMUSG00000032035, Ets1, E26 avian leukemia oncogene 1, 5' domain, [RH, Score=151, Expect=6e-41]} {Dmel: FBgn0003118, pnt, pointed, [RH, Score=145, Expect=7e-38]} {Celegans: WBGene00016600, ets-5, ETS class transcription factor, [Score=117, Expect=5e-31]} {Smed: dd_Smed_v6_28005_0_1, dd_Smed_v6_28005_0_1, [Score=115, Expect=1e-30]} {RNA1509_20315} {RNA1310_8950, RNA1509_20315} {RNA1509_20315, RNA815_11336}
4. MligTC455_35333 90 1.87 Mlig455_067763

Neo: -

Age: -

RPS6KB1 1.724 0.964 - - - - 0.760 Mlig455_067763 {REF} {Length: 2200} {Pfam: Protein kinase domain [PF00069.27, score=227.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=114.1]; Protein kinase C terminal domain [PF00433.26, score=39.1]; Kinase-like [PF14531.8, score=30.7]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [Score=453, Expect=2e-155]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [Score=441, Expect=2e-150]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [Score=452, Expect=2e-154]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=431, Expect=1e-146]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=431, Expect=1e-146]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [Score=437, Expect=5e-149]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [Score=427, Expect=2e-144]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [RH, Score=466, Expect=2e-160]} {RNA1509_36368} {RNA1310_14771.1} {RNA815_3550}
5. MligTC455_24820 159 3.32 Mlig455_055662

Neo: -

Age: -

ETS1 1.716 - 0.952 - - - 0.764 Mlig455_055662 {REF} {Length: 1194} {Pfam: Ets-domain [PF00178.24, score=30.3]} {Human: ENSG00000134954, ETS1, ETS proto-oncogene 1, transcription factor, [Score=44.3, Expect=1e-06]; ENSG00000157557, ETS2, ETS proto-oncogene 2, transcription factor, [Score=44.3, Expect=1e-06]; ENSG00000126767, ELK1, ELK1, ETS transcription factor, [Score=42.7, Expect=5e-06]} {Mouse: ENSMUSG00000022895, Ets2, E26 avian leukemia oncogene 2, 3' domain, [Score=44.7, Expect=8e-07]; ENSMUSG00000032035, Ets1, E26 avian leukemia oncogene 1, 5' domain, [Score=44.3, Expect=9e-07]; ENSMUSG00000009406, Elk1, ELK1, member of ETS oncogene family, [Score=43.1, Expect=3e-06]} {Dmel: FBgn0003118, pnt, pointed, [Score=44.7, Expect=5e-07]} {Celegans: WBGene00017598, F19F10.1, [Score=40.8, Expect=9e-06]} {Smed: dd_Smed_v6_2092_0_1, dd_Smed_v6_2092_0_1, [Score=48.5, Expect=2e-09]} {RNA1509_20315} {RNA1310_8950} {RNA815_30626}
6. MligTC455_19684 106 2.2 Mlig455_009082

Neo: -

Age: Up-Down-Up

1.693 - 0.952 - 0.741 - - Mlig455_009082 {REF} {Length: 1842} {RNA1509_57072} {RNA1310_25564} {RNA815_54244}
7. MligTC455_13321 258 5.38 Mlig455_045501

Neo: -

Age: Down-Down-Up

1.678 - 0.951 - - - 0.727 Mlig455_045501 {REF} {Length: 2006} {RNA1509_43769} {RNA1310_13950, RNA1509_43769} {RNA1509_43769, RNA815_5909}
8. MligTC455_49511 324 6.76 Mlig455_001161

Neo: -

Age: Down-Up-Down

1.668 0.707 0.961 - - - - Mlig455_001161 {REF} {Length: 2299} {TRANSSPLICED} {RNA1509_17368, RNA1509_8645} {RNA1310_12470, RNA1509_17368, RNA1509_8645} {RNA1509_17368, RNA1509_8645, RNA815_9297.1}
9. MligTC455_00120 11 0.24 Mlig455_017377

Neo: -

Age: -

0.989 - - - - 0.989 - Mlig455_017377 {REF} {Length: 582} {NoTransDecoderORF}
10. MligTC455_39406 44 0.92 Mlig455_026121

Neo: -

Age: Up-Down-Down

RBMS1 0.972 - 0.972 - - - - Mlig455_026121 {REF} {Length: 2550} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=40.0]} {Human: ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=106, Expect=1e-24]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=102, Expect=5e-23]; ENSG00000076067, RBMS2, RNA binding motif single stranded interacting protein 2, [Score=102, Expect=4e-23]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [Score=110, Expect=4e-26]} {Dmel: FBgn0052423, shep, alan shepard, [Score=84.7, Expect=3e-17]} {Celegans: WBGene00006331, sup-26, SUPpressor, [Score=100, Expect=9e-23]} {Smed: dd_Smed_v6_3832_0_1, dd_Smed_v6_3832_0_1, [RH, Score=105, Expect=9e-25]} {RNA1310_39053} {RNA815_20087}
11. MligTC455_45250 173 3.61 Mlig455_012405

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.370

Region-enriched R8: 4.444/0.04464

0.971 - 0.971 - - - - Mlig455_012405 {REF} {Length: 2733} {RNA1310_16550} {RNA815_17676}
12. MligTC455_35307 38 0.79 Mlig455_012667

Neo: -

Age: Up-Down-Down

SLC12A9 0.967 - - - - - 0.967 Mlig455_012667 {REF} {Length: 2914} {Pfam: Amino acid permease [PF00324.23, score=25.1]} {Human: ENSG00000146828, SLC12A9, solute carrier family 12 member 9, [Score=63.5, Expect=2e-12]} {Mouse: ENSMUSG00000037344, Slc12a9, solute carrier family 12 (potassium/chloride transporters), member 9, [Score=65.1, Expect=4e-13]} {Dmel: FBgn0032689, CG10413, [Score=87.0, Expect=7e-21]} {Celegans: WBGene00020207, T04B8.5, [Score=88.6, Expect=1e-21]} {Smed: dd_Smed_v6_1738_0_6, dd_Smed_v6_1738_0_6, [Score=101, Expect=3e-26]} {RNA1509_47734} {RNA1310_20621} {RNA815_24306}
13. MligTC455_40233 550 11.46 Mlig455_010288, Mlig455_010326

Neo: -

Age: -

Region-enriched R8: 2.427/0.01141

UNC5A 0.965 - 0.965 - - - -

Mlig455_010288 {REF} {Length: 5227} {Pfam: ZU5 domain [PF00791.22, score=95.5]; UPA domain [PF17217.5, score=68.9]; Death domain [PF00531.24, score=52.5]; Immunoglobulin domain [PF13927.8, score=23.3]; Immunoglobulin domain [PF00047.27, score=19.7]} {Human: ENSG00000113763, UNC5A, unc-5 netrin receptor A, [RH, Score=213, Expect=1e-56]} {Mouse: ENSMUSG00000025876, Unc5a, unc-5 netrin receptor A, [RH, Score=211, Expect=3e-56]} {Dmel: FBgn0034013, unc-5, [Score=95.9, Expect=1e-19]} {Celegans: WBGene00006745, unc-5, Netrin receptor unc-5, [Score=174, Expect=2e-44]} {Smed: dd_Smed_v6_10730_0_1, dd_Smed_v6_10730_0_1, [Score=306, Expect=1e-88]} {RNA1509_46036} {RNA1310_39257} {RNA815_1054.1}

Mlig455_010326 {REF} {Length: 5544} {Pfam: ZU5 domain [PF00791.22, score=96.1]; UPA domain [PF17217.5, score=70.1]; Death domain [PF00531.24, score=52.9]} {Human: ENSG00000113763, UNC5A, unc-5 netrin receptor A, [RH, Score=214, Expect=2e-58]} {Mouse: ENSMUSG00000025876, Unc5a, unc-5 netrin receptor A, [RH, Score=211, Expect=1e-57]} {Dmel: FBgn0034013, unc-5, [Score=93.6, Expect=3e-19]} {Celegans: WBGene00006745, unc-5, Netrin receptor unc-5, [RH, Score=133, Expect=4e-32]} {Smed: dd_Smed_v6_10730_0_1, dd_Smed_v6_10730_0_1, [Score=278, Expect=3e-81]} {RNA1509_46036} {RNA1310_8280.2} {RNA815_1054.1}
14. MligTC455_52808 206 4.3 Mlig455_031875

Neo: -

Age: -

TRPM3 0.96 - 0.960 - - - - Mlig455_031875 {REF} {Length: 4103} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=109.3]; Ankyrin repeats (many copies) [PF13637.8, score=88.9]; Ankyrin repeats (many copies) [PF13857.8, score=87.4]; Ankyrin repeat [PF13606.8, score=68.6]; Ankyrin repeat [PF00023.32, score=66.6]; Ion transport protein [PF00520.33, score=52.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=142, Expect=9e-34]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=140, Expect=7e-33]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=140, Expect=7e-33]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=147, Expect=4e-35]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=140, Expect=6e-33]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=99.4, Expect=2e-20]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=89.4, Expect=1e-17]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=211, Expect=8e-56]} {RNA1509_27191} {RNA1310_2426, RNA1509_27191} {RNA1509_27191, RNA815_1926}
15. MligTC455_31313 381 7.94 Mlig455_001901

Neo: -

Age: -

ARGLU1 0.956 - 0.956 - - - - Mlig455_001901 {REF} {Length: 2328} {TRANSSPLICED} {Pfam: Arginine and glutamate-rich 1 [PF15346.8, score=111.3]} {Human: ENSG00000134884, ARGLU1, arginine and glutamate rich 1, [RH, Score=79.0, Expect=1e-16]} {Mouse: ENSMUSG00000040459, Arglu1, arginine and glutamate rich 1, [RH, Score=79.3, Expect=9e-17]} {Dmel: FBgn0051712, CG31712, [RH, Score=83.2, Expect=3e-18]} {Smed: dd_Smed_v6_6381_0_1, dd_Smed_v6_6381_0_1, [RH, Score=63.9, Expect=5e-12]} {RNA1509_30130} {RNA1310_34850} {RNA815_5433.1}
16. MligTC455_22002 106 2.21 Mlig455_023032

Neo: -

Age: -

Region-enriched R8: 4.291/0.00060

FCN2 0.954 0.954 - - - - - Mlig455_023032 {REF} {Length: 2437} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=60.4]; PAN domain [PF14295.8, score=21.9]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=72.4, Expect=1e-13]} {Mouse: ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=48.9, Expect=7e-06]; ENSMUSG00000002289, Angptl4, angiopoietin-like 4, [Score=48.9, Expect=6e-06]; ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=48.5, Expect=9e-06]; ENSMUSG00000028553, Angptl3, angiopoietin-like 3, [Score=48.5, Expect=9e-06]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=48.1, Expect=1e-05]} {Dmel: FBgn0031804, CG9500, [Score=73.6, Expect=2e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=56.2, Expect=2e-08]} {RNA1509_53291} {RNA1310_30694.1} {RNA815_10579.2}
17. MligTC455_53915 113 2.36 Mlig455_018452

Neo: -

Age: -

0.953 - 0.953 - - - - Mlig455_018452 {REF} {Length: 3976} {TRANSSPLICED} {Pfam: Cadherin-like beta sandwich domain [PF12733.9, score=98.5]; TPR repeat [PF13414.8, score=29.6]; Tetratricopeptide repeat [PF07719.19, score=24.7]; Tetratricopeptide repeat [PF13428.8, score=23.1]; Tetratricopeptide repeat [PF13424.8, score=22.6]; Tetratricopeptide repeat [PF14559.8, score=22.0]} {Smed: dd_Smed_v6_13836_0_1, dd_Smed_v6_13836_0_1, [RH, Score=277, Expect=2e-77]} {RNA1509_15096} {RNA1310_1559.1} {RNA815_7116}
18. MligTC455_17393 345 7.18 Mlig455_019018, Mlig455_055685

Neo: -

Age: -

ANKDD1A 0.952 - 0.952 - - - -

Mlig455_019018 {REF} {Length: 2636} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=191.1]; Ankyrin repeats (many copies) [PF13637.8, score=165.7]; Ankyrin repeat [PF13606.8, score=151.2]; Ankyrin repeats (many copies) [PF13857.8, score=149.5]; Ankyrin repeat [PF00023.32, score=143.3]; Death domain [PF00531.24, score=29.5]} {Human: ENSG00000166839, ANKDD1A, ankyrin repeat and death domain containing 1A, [RH, Score=266, Expect=9e-82]} {Mouse: ENSMUSG00000066510, Ankdd1a, ankyrin repeat and death domain containing 1A, [RH, Score=273, Expect=2e-84]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=139, Expect=6e-34]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=131, Expect=1e-31]} {Smed: dd_Smed_v6_7532_0_1, dd_Smed_v6_7532_0_1, [RH, Score=464, Expect=2e-158]} {RNA1509_56207} {RNA1310_4362} {RNA815_20274}

Mlig455_055685 {REF} {Length: 2672} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=191.4]; Ankyrin repeats (many copies) [PF13637.8, score=165.4]; Ankyrin repeat [PF13606.8, score=149.6]; Ankyrin repeats (many copies) [PF13857.8, score=148.6]; Ankyrin repeat [PF00023.32, score=142.4]; Death domain [PF00531.24, score=29.5]} {Human: ENSG00000166839, ANKDD1A, ankyrin repeat and death domain containing 1A, [RH, Score=267, Expect=7e-82]} {Mouse: ENSMUSG00000066510, Ankdd1a, ankyrin repeat and death domain containing 1A, [RH, Score=273, Expect=2e-84]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=137, Expect=1e-33]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=131, Expect=1e-31]} {Smed: dd_Smed_v6_7532_0_1, dd_Smed_v6_7532_0_1, [RH, Score=466, Expect=7e-159]} {RNA1509_56207} {RNA1310_4362, RNA1509_56207} {RNA1509_56207, RNA815_20274}
19. MligTC455_28200 193 4.02 Mlig455_028718

Neo: -

Age: Down-Down-Up

0.951 - 0.951 - - - - Mlig455_028718 {REF} {Length: 3033} {RNA1310_26549.1} {RNA815_8222.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA