Data search
Results for MligTC455_41958
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41958 | 216 | 4.49 | Mlig455_050429 | Neo: - Age: Up-Up-Down |
NUP98 | Mlig455_050429 {REF} {Length: 4671} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=36.7]; Ankyrin repeats (many copies) [PF13637.8, score=28.7]; Ankyrin repeats (many copies) [PF13857.8, score=25.4]} {Human: ENSG00000110713, NUP98, nucleoporin 98, [Score=54.7, Expect=1e-06]} {RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997} {RNA1310_20189, RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997} {RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997, RNA815_9258} |
Cumulative graph for MligTC455_41958
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.759 | 2.831 | 0.64382 | 1.00000 | |
| RegionR2 | 1.449 | 2.831 | 0.11852 | 0.42647 | |
| RegionR3 | 0.73 | 2.831 | 0.29359 | 0.83577 | |
| RegionR4 | 0.115 | 2.831 | 0.89332 | 1.00000 | |
| RegionR5 | -0.266 | 2.831 | 0.69442 | 1.00000 | |
| RegionR6 | -0.046 | 2.831 | 0.95319 | 1.00000 | |
| RegionR7 | -2.678 | 2.831 | 0.03375 | 0.34998 | |
| RegionR8 | -0.063 | 2.831 | 0.95729 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.339 | 2.831 | 0.46743 | 1.00000 | |
| RegenerationR2 | 0.791 | 2.831 | 0.27316 | 0.71858 | |
| RegenerationR3 | 0.533 | 2.831 | 0.52485 | 0.86923 | |
| RegenerationR4 | -0.105 | 2.831 | 0.91642 | 1.00000 | |
| RegenerationR5 | 0.666 | 2.831 | 0.41019 | 0.80569 | |
| RegenerationR6 | 0.287 | 2.831 | 0.76232 | 0.95750 | |
| RegenerationBL | 0.047 | 2.831 | 0.99511 | 1.00000 | |
| RegenerationTP | 2.682 | 2.831 | 0.01955 | 0.23959 |
Genes with expression patterns similar to MligTC455_41958
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41958 | 216 | 4.49 | Mlig455_050429 | Neo: - Age: Up-Up-Down |
NUP98 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050429 {REF} {Length: 4671} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=36.7]; Ankyrin repeats (many copies) [PF13637.8, score=28.7]; Ankyrin repeats (many copies) [PF13857.8, score=25.4]} {Human: ENSG00000110713, NUP98, nucleoporin 98, [Score=54.7, Expect=1e-06]} {RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997} {RNA1310_20189, RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997} {RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997, RNA815_9258} |
| 2. | MligTC455_09987 | 213 | 4.43 | Mlig455_061259 | Neo: - Age: - |
2.582 | - | - | 0.961 | - | 0.864 | 0.757 | Mlig455_061259 {REF} {Length: 878} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=36.3]} {RNA1509_35099} {RNA1310_42966} {RNA815_24864} | |
| 3. | MligTC455_03360 | 18 | 0.38 | Mlig455_045830 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_045830 {REF} {Length: 498} {RNA1310_134422} {RNA815_64754} | |
| 4. | MligTC455_05491 | 7 | 0.14 | Mlig455_012366 | Neo: - Age: - |
PRR9 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_012366 {REF} {Length: 810} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=9e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=53.9, Expect=2e-08]} |
| 5. | MligTC455_22046 | 151 | 3.14 | Mlig455_059130 | Neo: - Age: - Region-enriched R7: 4.034/0.00000 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_059130 {REF} {Length: 2489} {RNA1509_3959} {RNA1310_35790} {RNA815_5295} | |
| 6. | MligTC455_18961 | 290 | 6.05 | Mlig455_027918 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_027918 {REF} {Length: 1269} {RNA1509_18336} {RNA1310_16542.2} {RNA815_28056} | |
| 7. | MligTC455_00321 | 20 | 0.42 | Mlig455_042919 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_042919 {REF} {Length: 401} {RNA1509_45342} {RNA1310_136249} | |
| 8. | MligTC455_49372 | 354 | 7.38 | Mlig455_000027, Mlig455_063730 | Neo: - Age: Up-Down-Up |
ECT2 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_000027 {REF} {Length: 2943} {Pfam: RhoGEF domain [PF00621.22, score=121.5]} {Human: ENSG00000114346, ECT2, epithelial cell transforming 2, [Score=71.6, Expect=3e-12]} {Mouse: ENSMUSG00000027699, Ect2, ect2 oncogene, [Score=70.1, Expect=5e-12]; ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=68.9, Expect=2e-11]} {Dmel: FBgn0262562, CG43102, [Score=81.3, Expect=2e-15]} {Celegans: WBGene00002297, ect-2, ECT2 (Mammalian Rho GEF) homolog, [Score=60.1, Expect=4e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=59.3, Expect=6e-09]} {RNA1509_60002} {RNA1310_20096} {RNA815_13312} Mlig455_063730 {REF} {Length: 4407} {Pfam: RhoGEF domain [PF00621.22, score=122.0]} {Human: ENSG00000114346, ECT2, epithelial cell transforming 2, [Score=71.2, Expect=4e-12]} {Mouse: ENSMUSG00000027699, Ect2, ect2 oncogene, [Score=70.1, Expect=5e-12]; ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=68.6, Expect=2e-11]} {Dmel: FBgn0262562, CG43102, [Score=82.4, Expect=6e-16]} {Celegans: WBGene00002297, ect-2, ECT2 (Mammalian Rho GEF) homolog, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=58.9, Expect=7e-09]} {RNA1509_60002} {RNA1310_20096} {RNA815_13312} |
| 9. | MligTC455_27853 | 40 | 0.83 | Mlig455_069650 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_069650 {REF} {Length: 3238} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=130.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=115.7]; Integrase zinc binding domain [PF17921.3, score=72.1]; Integrase core domain [PF00665.28, score=50.6]; DDE superfamily endonuclease [PF13358.8, score=21.3]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=207, Expect=7e-60]} {RNA1509_28802} {RNA1310_131.1} {RNA815_52.1} | |
| 10. | MligTC455_46883 | 237 | 4.94 | Mlig455_049862, Mlig455_069981 | Neo: - Age: Down-Up-Down |
CALM2 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_049862 {REF} {Length: 1491} {Pfam: EF hand [PF00036.34, score=117.6]; EF-hand domain pair [PF13499.8, score=101.1]; EF hand [PF13202.8, score=89.0]; EF-hand domain [PF13405.8, score=88.4]; EF-hand domain pair [PF13833.8, score=80.7]; EF-hand domain [PF14658.8, score=38.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=32.3]; Caleosin related protein [PF05042.15, score=31.6]; Uncharacterised protein family (UPF0154) [PF03672.15, score=25.7]; Dockerin type I domain [PF00404.20, score=24.1]; Tellurite resistance protein TerB [PF05099.15, score=20.9]; Family of unknown function (DUF5847) [PF19165.2, score=17.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=166, Expect=6e-52]; ENSG00000160014, CALM3, calmodulin 3, [Score=162, Expect=6e-51]; ENSG00000198668, CALM1, calmodulin 1, [Score=162, Expect=6e-51]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=1e-50]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=162, Expect=4e-51]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=162, Expect=4e-51]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=156, Expect=1e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=3e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=9e-52]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=164, Expect=7e-52]} {RNA1509_51949} {RNA1310_28246.1} {RNA815_26792} Mlig455_069981 {REF} {Length: 1541} {Pfam: EF hand [PF00036.34, score=117.6]; EF-hand domain pair [PF13499.8, score=101.1]; EF hand [PF13202.8, score=89.0]; EF-hand domain [PF13405.8, score=88.4]; EF-hand domain pair [PF13833.8, score=80.7]; EF-hand domain [PF14658.8, score=38.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=32.3]; Caleosin related protein [PF05042.15, score=31.6]; Uncharacterised protein family (UPF0154) [PF03672.15, score=25.7]; Dockerin type I domain [PF00404.20, score=24.1]; Tellurite resistance protein TerB [PF05099.15, score=20.9]; Family of unknown function (DUF5847) [PF19165.2, score=17.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=166, Expect=6e-52]; ENSG00000160014, CALM3, calmodulin 3, [Score=162, Expect=6e-51]; ENSG00000198668, CALM1, calmodulin 1, [Score=162, Expect=6e-51]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=1e-50]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=162, Expect=4e-51]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=162, Expect=4e-51]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=156, Expect=1e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=3e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=9e-52]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=164, Expect=7e-52]} {RNA1509_51949} {RNA1310_28246.1, RNA1509_51949} {RNA1509_51949, RNA815_26792} |
| 11. | MligTC455_22428 | 96 | 2.01 | Mlig455_011005 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_011005 {REF} {Length: 3873} {Pfam: WS/DGAT C-terminal domain [PF06974.15, score=54.7]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.2]; Telomere-associated protein TERB2 [PF15101.8, score=20.0]; ZIP Zinc transporter [PF02535.24, score=18.7]; Ureide permease [PF07168.13, score=17.4]} {Smed: dd_Smed_v6_7004_0_1, dd_Smed_v6_7004_0_1, [Score=151, Expect=2e-37]} {RNA1310_98904} | |
| 12. | MligTC455_04358 | 40 | 0.83 | Mlig455_061396 | Neo: - Age: - Region-enriched R7: 4.622/0.01812 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_061396 {REF} {Length: 963} {RNA1509_36436} {RNA1310_57166} {RNA815_43432} | |
| 13. | MligTC455_24769 | 227 | 4.72 | Mlig455_027516 | Neo: - Age: - Regeneration-upregulated BL: 4.185 Regeneration-enriched BL: 4.185 |
AMBRA1 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_027516 {REF} {Length: 4785} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.9]} {Human: ENSG00000110497, AMBRA1, autophagy and beclin 1 regulator 1, [RH, Score=79.7, Expect=1e-14]} {Mouse: ENSMUSG00000040506, Ambra1, autophagy/beclin 1 regulator 1, [RH, Score=79.7, Expect=9e-15]} {RNA1509_17935} {RNA1310_8113.1, RNA1509_17935} {RNA1509_17935, RNA815_408.1} |
| 14. | MligTC455_35206 | 8 | 0.16 | Mlig455_056719, Mlig455_060299 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_056719 {REF} {Length: 2193} {Pfam: PIF1-like helicase [PF05970.16, score=103.1]; Galactosyltransferase [PF01762.23, score=87.9]; AAA domain [PF13604.8, score=22.4]; Fringe-like [PF02434.18, score=22.0]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=68.2, Expect=8e-12]; ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=67.4, Expect=1e-11]} {Dmel: FBgn0040373, CG3038, [Score=59.3, Expect=4e-09]} {Celegans: WBGene00021577, Y46B2A.2, [Score=85.5, Expect=4e-17]} {Smed: dd_Smed_v6_5936_0_2, dd_Smed_v6_5936_0_2, [RH, Score=80.1, Expect=4e-16]} {RNA1310_24693} {RNA815_36390} Mlig455_060299 {REF} {Length: 2011} {Pfam: PIF1-like helicase [PF05970.16, score=103.1]; Galactosyltransferase [PF01762.23, score=88.3]; AAA domain [PF13604.8, score=21.5]; Fringe-like [PF02434.18, score=21.1]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=68.2, Expect=8e-12]; ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=66.2, Expect=3e-11]} {Dmel: FBgn0040373, CG3038, [Score=57.4, Expect=2e-08]} {Celegans: WBGene00021577, Y46B2A.2, [Score=85.5, Expect=4e-17]} {Smed: dd_Smed_v6_5936_0_2, dd_Smed_v6_5936_0_2, [Score=78.6, Expect=1e-15]} {RNA1310_24693} {RNA815_36390} |
|
| 15. | MligTC455_42513 | 70 | 1.45 | Mlig455_023063, Mlig455_023065 | Neo: - Age: - |
KCNC2 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_023063 {REF} {Length: 2276} {Pfam: Ion transport protein [PF00520.33, score=123.8]; BTB/POZ domain [PF02214.24, score=86.7]; Ion channel [PF07885.18, score=37.0]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=284, Expect=7e-87]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=280, Expect=4e-85]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=271, Expect=2e-81]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=279, Expect=4e-85]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=271, Expect=3e-81]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=285, Expect=3e-87]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [Score=303, Expect=4e-94]} {Smed: dd_Smed_v6_13250_0_2, dd_Smed_v6_13250_0_2, [Score=286, Expect=3e-88]} {RNA1509_33421} {RNA1310_15684} {RNA815_16308} Mlig455_023065 {REF} {Length: 2276} {Pfam: Ion transport protein [PF00520.33, score=123.8]; BTB/POZ domain [PF02214.24, score=86.7]; Ion channel [PF07885.18, score=37.0]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=284, Expect=7e-87]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=280, Expect=4e-85]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=271, Expect=2e-81]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=279, Expect=4e-85]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=271, Expect=3e-81]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=285, Expect=3e-87]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [Score=303, Expect=4e-94]} {Smed: dd_Smed_v6_13250_0_2, dd_Smed_v6_13250_0_2, [Score=286, Expect=3e-88]} {RNA1509_33421} {RNA1310_15684} {RNA815_16308} |