TomoSeq data search

Data search

Results for MligTC455_46883

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_46883	237	4.94	Mlig455_049862, Mlig455_069981	Neo: - Age: Down-Up-Down	CALM2	Mlig455_049862 {REF} {Length: 1491} {Pfam: EF hand [PF00036.34, score=117.6]; EF-hand domain pair [PF13499.8, score=101.1]; EF hand [PF13202.8, score=89.0]; EF-hand domain [PF13405.8, score=88.4]; EF-hand domain pair [PF13833.8, score=80.7]; EF-hand domain [PF14658.8, score=38.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=32.3]; Caleosin related protein [PF05042.15, score=31.6]; Uncharacterised protein family (UPF0154) [PF03672.15, score=25.7]; Dockerin type I domain [PF00404.20, score=24.1]; Tellurite resistance protein TerB [PF05099.15, score=20.9]; Family of unknown function (DUF5847) [PF19165.2, score=17.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=166, Expect=6e-52]; ENSG00000160014, CALM3, calmodulin 3, [Score=162, Expect=6e-51]; ENSG00000198668, CALM1, calmodulin 1, [Score=162, Expect=6e-51]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=1e-50]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=162, Expect=4e-51]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=162, Expect=4e-51]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=156, Expect=1e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=3e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=9e-52]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=164, Expect=7e-52]} {RNA1509_51949} {RNA1310_28246.1} {RNA815_26792} Mlig455_069981 {REF} {Length: 1541} {Pfam: EF hand [PF00036.34, score=117.6]; EF-hand domain pair [PF13499.8, score=101.1]; EF hand [PF13202.8, score=89.0]; EF-hand domain [PF13405.8, score=88.4]; EF-hand domain pair [PF13833.8, score=80.7]; EF-hand domain [PF14658.8, score=38.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=32.3]; Caleosin related protein [PF05042.15, score=31.6]; Uncharacterised protein family (UPF0154) [PF03672.15, score=25.7]; Dockerin type I domain [PF00404.20, score=24.1]; Tellurite resistance protein TerB [PF05099.15, score=20.9]; Family of unknown function (DUF5847) [PF19165.2, score=17.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=166, Expect=6e-52]; ENSG00000160014, CALM3, calmodulin 3, [Score=162, Expect=6e-51]; ENSG00000198668, CALM1, calmodulin 1, [Score=162, Expect=6e-51]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=1e-50]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=162, Expect=4e-51]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=162, Expect=4e-51]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=156, Expect=1e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=3e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=9e-52]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=164, Expect=7e-52]} {RNA1509_51949} {RNA1310_28246.1, RNA1509_51949} {RNA1509_51949, RNA815_26792}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46883

237

4.94

Mlig455_049862, Mlig455_069981

Neo: -

Age: Down-Up-Down

CALM2

Mlig455_049862 {REF} {Length: 1491} {Pfam: EF hand [PF00036.34, score=117.6]; EF-hand domain pair [PF13499.8, score=101.1]; EF hand [PF13202.8, score=89.0]; EF-hand domain [PF13405.8, score=88.4]; EF-hand domain pair [PF13833.8, score=80.7]; EF-hand domain [PF14658.8, score=38.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=32.3]; Caleosin related protein [PF05042.15, score=31.6]; Uncharacterised protein family (UPF0154) [PF03672.15, score=25.7]; Dockerin type I domain [PF00404.20, score=24.1]; Tellurite resistance protein TerB [PF05099.15, score=20.9]; Family of unknown function (DUF5847) [PF19165.2, score=17.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=166, Expect=6e-52]; ENSG00000160014, CALM3, calmodulin 3, [Score=162, Expect=6e-51]; ENSG00000198668, CALM1, calmodulin 1, [Score=162, Expect=6e-51]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=1e-50]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=162, Expect=4e-51]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=162, Expect=4e-51]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=156, Expect=1e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=3e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=9e-52]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=164, Expect=7e-52]} {RNA1509_51949} {RNA1310_28246.1} {RNA815_26792}

Mlig455_069981 {REF} {Length: 1541} {Pfam: EF hand [PF00036.34, score=117.6]; EF-hand domain pair [PF13499.8, score=101.1]; EF hand [PF13202.8, score=89.0]; EF-hand domain [PF13405.8, score=88.4]; EF-hand domain pair [PF13833.8, score=80.7]; EF-hand domain [PF14658.8, score=38.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=32.3]; Caleosin related protein [PF05042.15, score=31.6]; Uncharacterised protein family (UPF0154) [PF03672.15, score=25.7]; Dockerin type I domain [PF00404.20, score=24.1]; Tellurite resistance protein TerB [PF05099.15, score=20.9]; Family of unknown function (DUF5847) [PF19165.2, score=17.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=166, Expect=6e-52]; ENSG00000160014, CALM3, calmodulin 3, [Score=162, Expect=6e-51]; ENSG00000198668, CALM1, calmodulin 1, [Score=162, Expect=6e-51]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=1e-50]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=162, Expect=4e-51]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=162, Expect=4e-51]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=156, Expect=1e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=3e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=9e-52]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=164, Expect=7e-52]} {RNA1509_51949} {RNA1310_28246.1, RNA1509_51949} {RNA1509_51949, RNA815_26792}

Cumulative graph for MligTC455_46883

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-10.78	2.844	0.01724	0.36694
RegionR2	4.327	2.844	0.00794	0.08707
RegionR3	3.167	2.844	0.01996	0.23693
RegionR4	-2.513	2.844	0.99958	1.00000
RegionR5	0.17	2.844	0.81650	1.00000
RegionR6	1.654	2.844	0.26266	0.85054
RegionR7	2.064	2.844	0.13581	0.69214
RegionR8	1.912	2.844	0.20546	0.80617

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.094	2.844	0.99974	1.00000
RegenerationR2	2.991	2.844	0.07852	0.45209
RegenerationR3	2.04	2.844	0.23626	0.67038
RegenerationR4	4.073	2.844	0.04235	0.33092
RegenerationR5	2.266	2.844	0.18382	0.61404
RegenerationR6	2.003	2.844	0.23208	0.57907
RegenerationBL	1.232	2.844	0.40622	0.77558
RegenerationTP	2.547	2.844	0.12071	0.52982

Genes with expression patterns similar to MligTC455_46883

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46883	237	4.94	Mlig455_049862, Mlig455_069981	Neo: - Age: Down-Up-Down	CALM2	4	1.000	1.000	-	1.000	1.000	-	Mlig455_049862 {REF} {Length: 1491} {Pfam: EF hand [PF00036.34, score=117.6]; EF-hand domain pair [PF13499.8, score=101.1]; EF hand [PF13202.8, score=89.0]; EF-hand domain [PF13405.8, score=88.4]; EF-hand domain pair [PF13833.8, score=80.7]; EF-hand domain [PF14658.8, score=38.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=32.3]; Caleosin related protein [PF05042.15, score=31.6]; Uncharacterised protein family (UPF0154) [PF03672.15, score=25.7]; Dockerin type I domain [PF00404.20, score=24.1]; Tellurite resistance protein TerB [PF05099.15, score=20.9]; Family of unknown function (DUF5847) [PF19165.2, score=17.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=166, Expect=6e-52]; ENSG00000160014, CALM3, calmodulin 3, [Score=162, Expect=6e-51]; ENSG00000198668, CALM1, calmodulin 1, [Score=162, Expect=6e-51]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=1e-50]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=162, Expect=4e-51]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=162, Expect=4e-51]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=156, Expect=1e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=3e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=9e-52]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=164, Expect=7e-52]} {RNA1509_51949} {RNA1310_28246.1} {RNA815_26792} Mlig455_069981 {REF} {Length: 1541} {Pfam: EF hand [PF00036.34, score=117.6]; EF-hand domain pair [PF13499.8, score=101.1]; EF hand [PF13202.8, score=89.0]; EF-hand domain [PF13405.8, score=88.4]; EF-hand domain pair [PF13833.8, score=80.7]; EF-hand domain [PF14658.8, score=38.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=32.3]; Caleosin related protein [PF05042.15, score=31.6]; Uncharacterised protein family (UPF0154) [PF03672.15, score=25.7]; Dockerin type I domain [PF00404.20, score=24.1]; Tellurite resistance protein TerB [PF05099.15, score=20.9]; Family of unknown function (DUF5847) [PF19165.2, score=17.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=166, Expect=6e-52]; ENSG00000160014, CALM3, calmodulin 3, [Score=162, Expect=6e-51]; ENSG00000198668, CALM1, calmodulin 1, [Score=162, Expect=6e-51]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=1e-50]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=162, Expect=4e-51]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=162, Expect=4e-51]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=156, Expect=1e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=3e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=9e-52]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=164, Expect=7e-52]} {RNA1509_51949} {RNA1310_28246.1, RNA1509_51949} {RNA1509_51949, RNA815_26792}
2.	MligTC455_18237	1138	23.7	Mlig455_061064, Mlig455_061112	Neo: - Age: Down-Up-Down		0.955	-	-	-	0.955	-	-	Mlig455_061064 {REF} {Length: 4093} {Dmel: FBgn0036416, CG7924, [Score=53.1, Expect=6e-07]} {RNA1509_19147} {RNA1310_5856.1, RNA1509_19147} {RNA1509_19147, RNA815_9645} Mlig455_061112 {REF} {Length: 3947} {RNA1509_19147} {RNA1310_5856.1} {RNA815_9645}
3.	MligTC455_41958	216	4.49	Mlig455_050429	Neo: - Age: Up-Up-Down	NUP98	0.952	-	-	-	-	0.952	-	Mlig455_050429 {REF} {Length: 4671} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=36.7]; Ankyrin repeats (many copies) [PF13637.8, score=28.7]; Ankyrin repeats (many copies) [PF13857.8, score=25.4]} {Human: ENSG00000110713, NUP98, nucleoporin 98, [Score=54.7, Expect=1e-06]} {RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997} {RNA1310_20189, RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997} {RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997, RNA815_9258}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_46883

237

4.94

Mlig455_049862, Mlig455_069981

Neo: -

Age: Down-Up-Down

CALM2

1.000

MligTC455_18237

1138

23.7

Mlig455_061064, Mlig455_061112

Neo: -

Age: Down-Up-Down

0.955

Mlig455_061064 {REF} {Length: 4093} {Dmel: FBgn0036416, CG7924, [Score=53.1, Expect=6e-07]} {RNA1509_19147} {RNA1310_5856.1, RNA1509_19147} {RNA1509_19147, RNA815_9645}

Mlig455_061112 {REF} {Length: 3947} {RNA1509_19147} {RNA1310_5856.1} {RNA815_9645}

MligTC455_41958

216

4.49

Mlig455_050429

Neo: -

Age: Up-Up-Down

NUP98

0.952

Mlig455_050429 {REF} {Length: 4671} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=36.7]; Ankyrin repeats (many copies) [PF13637.8, score=28.7]; Ankyrin repeats (many copies) [PF13857.8, score=25.4]} {Human: ENSG00000110713, NUP98, nucleoporin 98, [Score=54.7, Expect=1e-06]} {RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997} {RNA1310_20189, RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997} {RNA1509_11001, RNA1509_14149, RNA1509_49057, RNA1509_56997, RNA815_9258}