Data search
Results for MligTC455_41966
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41966 | 75 | 1.57 | Mlig455_069844 | Neo: - Age: Down-Up-Up |
GABRA6 | Mlig455_069844 {REF} {Length: 3175} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=102.1]} {Human: ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [RH, Score=299, Expect=1e-95]; ENSG00000109158, GABRA4, gamma-aminobutyric acid type A receptor alpha4 subunit, [RH, Score=288, Expect=3e-90]; ENSG00000186297, GABRA5, gamma-aminobutyric acid type A receptor alpha5 subunit, [RH, Score=286, Expect=2e-90]} {Mouse: ENSMUSG00000020428, Gabra6, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6, [RH, Score=308, Expect=2e-99]; ENSMUSG00000055078, Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5, [RH, Score=295, Expect=3e-94]} {Dmel: FBgn0030707, CG8916, [RH, Score=387, Expect=5e-128]} {Celegans: WBGene00013914, lgc-37, Ligand-Gated ion Channel, [RH, Score=303, Expect=4e-97]} {Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=367, Expect=3e-123]} {RNA1509_52113} {RNA1310_20592, RNA1509_52113} {RNA1509_52113, RNA815_40535} |
Cumulative graph for MligTC455_41966
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.867 | 1.757 | 0.99961 | 1.00000 | |
| RegionR2 | 1.604 | 1.757 | 0.30472 | 0.69549 | |
| RegionR3 | 2.799 | 1.757 | 0.01337 | 0.18402 | |
| RegionR4 | -0.545 | 1.757 | 0.89311 | 1.00000 | |
| RegionR5 | -0.364 | 1.757 | 0.86503 | 1.00000 | |
| RegionR6 | 2.515 | 1.757 | 0.04035 | 0.37729 | |
| RegionR7 | 1.096 | 1.757 | 0.48450 | 1.00000 | |
| RegionR8 | -3.237 | 1.757 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.237 | 1.757 | 0.99998 | 1.00000 | |
| RegenerationR2 | 0.401 | 1.757 | 0.56828 | 0.90169 | |
| RegenerationR3 | 0.692 | 1.757 | 0.38472 | 0.79295 | |
| RegenerationR4 | 1.733 | 1.757 | 0.09982 | 0.49024 | |
| RegenerationR5 | 0.821 | 1.757 | 0.39307 | 0.79419 | |
| RegenerationR6 | -0.48 | 1.757 | 0.55438 | 0.84180 | |
| RegenerationBL | 0.09 | 1.757 | 0.78711 | 1.00000 | |
| RegenerationTP | -2.122 | 1.757 | 0.99965 | 1.00000 |
Genes with expression patterns similar to MligTC455_41966
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41966 | 75 | 1.57 | Mlig455_069844 | Neo: - Age: Down-Up-Up |
GABRA6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069844 {REF} {Length: 3175} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=102.1]} {Human: ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [RH, Score=299, Expect=1e-95]; ENSG00000109158, GABRA4, gamma-aminobutyric acid type A receptor alpha4 subunit, [RH, Score=288, Expect=3e-90]; ENSG00000186297, GABRA5, gamma-aminobutyric acid type A receptor alpha5 subunit, [RH, Score=286, Expect=2e-90]} {Mouse: ENSMUSG00000020428, Gabra6, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6, [RH, Score=308, Expect=2e-99]; ENSMUSG00000055078, Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5, [RH, Score=295, Expect=3e-94]} {Dmel: FBgn0030707, CG8916, [RH, Score=387, Expect=5e-128]} {Celegans: WBGene00013914, lgc-37, Ligand-Gated ion Channel, [RH, Score=303, Expect=4e-97]} {Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=367, Expect=3e-123]} {RNA1509_52113} {RNA1310_20592, RNA1509_52113} {RNA1509_52113, RNA815_40535} |
| 2. | MligTC455_19646 | 21 | 0.44 | Mlig455_014818 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_014818 {REF} {Length: 2486} {RNA1310_18210.1} {RNA815_24589} | |
| 3. | MligTC455_47768 | 38 | 0.79 | Mlig455_034040 | Neo: - Age: - |
CHRNA3 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_034040 {REF} {Length: 2559} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.2]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=25.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=139, Expect=1e-36]; ENSG00000275917, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=139, Expect=4e-37]; ENSG00000166664, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=139, Expect=8e-37]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=139, Expect=3e-36]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=139, Expect=1e-36]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=138, Expect=3e-36]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=135, Expect=5e-35]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=142, Expect=7e-38]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=136, Expect=2e-35]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=135, Expect=2e-35]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=160, Expect=3e-44]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=144, Expect=1e-38]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=149, Expect=3e-40]} {RNA1310_10964.1} {RNA815_16260.1} |
| 4. | MligTC455_09604 | 34 | 0.72 | Mlig455_056233 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_056233 {REF} {Length: 793} {NoTransDecoderORF} | |
| 5. | MligTC455_12975 | 5 | 0.11 | Mlig455_005087 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_005087 {REF} {Length: 2289} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=34.8]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.0]} {Smed: dd_Smed_v6_47269_0_1, dd_Smed_v6_47269_0_1, [RH, Score=88.6, Expect=3e-20]} {RNA1310_108699} |
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