Data search
Results for MligTC455_47768
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47768 | 38 | 0.79 | Mlig455_034040 | Neo: - Age: - |
CHRNA3 | Mlig455_034040 {REF} {Length: 2559} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.2]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=25.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=139, Expect=1e-36]; ENSG00000275917, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=139, Expect=4e-37]; ENSG00000166664, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=139, Expect=8e-37]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=139, Expect=3e-36]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=139, Expect=1e-36]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=138, Expect=3e-36]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=135, Expect=5e-35]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=142, Expect=7e-38]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=136, Expect=2e-35]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=135, Expect=2e-35]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=160, Expect=3e-44]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=144, Expect=1e-38]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=149, Expect=3e-40]} {RNA1310_10964.1} {RNA815_16260.1} |
Cumulative graph for MligTC455_47768
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.881 | 1.094 | 0.99976 | 1.00000 | |
| RegionR2 | 0.161 | 1.094 | 0.58757 | 0.94206 | |
| RegionR3 | -1.37 | 1.094 | 0.99979 | 1.00000 | |
| RegionR4 | 0.448 | 1.094 | 1.00000 | 1.00000 | |
| RegionR5 | 1.828 | 1.094 | 0.06329 | 0.22146 | |
| RegionR6 | -2.012 | 1.094 | 0.99977 | 1.00000 | |
| RegionR7 | 3.367 | 1.094 | 0.01487 | 0.22012 | |
| RegionR8 | -0.541 | 1.094 | 0.99984 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.853 | 1.094 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.457 | 1.094 | 0.70985 | 0.95979 | |
| RegenerationR3 | 1.708 | 1.094 | 0.26075 | 0.69562 | |
| RegenerationR4 | 0.211 | 1.094 | 0.38855 | 0.80645 | |
| RegenerationR5 | -0.802 | 1.094 | 0.49444 | 0.85564 | |
| RegenerationR6 | 3.87 | 1.094 | 0.05229 | 0.28660 | |
| RegenerationBL | 1.128 | 1.094 | 0.48895 | 0.85392 | |
| RegenerationTP | -0.481 | 1.094 | 0.90832 | 1.00000 |
Genes with expression patterns similar to MligTC455_47768
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47768 | 38 | 0.79 | Mlig455_034040 | Neo: - Age: - |
CHRNA3 | 3 | - | - | 1.000 | 1.000 | 1.000 | - | Mlig455_034040 {REF} {Length: 2559} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.2]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=25.8]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=139, Expect=1e-36]; ENSG00000275917, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=139, Expect=4e-37]; ENSG00000166664, CHRFAM7A, CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, [Score=139, Expect=8e-37]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=139, Expect=3e-36]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=139, Expect=1e-36]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=138, Expect=3e-36]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=135, Expect=5e-35]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=142, Expect=7e-38]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=136, Expect=2e-35]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=135, Expect=2e-35]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=160, Expect=3e-44]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=144, Expect=1e-38]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=149, Expect=3e-40]} {RNA1310_10964.1} {RNA815_16260.1} |
| 2. | MligTC455_35686 | 65 | 1.36 | Mlig455_038919 | Neo: - Age: - |
0.985 | - | - | 0.985 | - | - | - | Mlig455_038919 {REF} {Length: 2464} {RNA1509_23775} {RNA1310_8867} {RNA815_5748.1} | |
| 3. | MligTC455_36815 | 42 | 0.88 | Mlig455_027859 | Neo: - |
TRPM3 | 0.985 | - | - | 0.985 | - | - | - | Mlig455_027859 {REF} {Length: 5435} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=93.4]; Ankyrin repeats (many copies) [PF13637.8, score=66.4]; Ankyrin repeats (many copies) [PF13857.8, score=50.5]; Ankyrin repeat [PF13606.8, score=40.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=77.8, Expect=2e-13]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=79.0, Expect=6e-14]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=77.0, Expect=2e-13]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=63.9, Expect=1e-09]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=80.5, Expect=1e-14]} {Smed: dd_Smed_v6_13669_0_1, dd_Smed_v6_13669_0_1, [Score=84.0, Expect=5e-16]} {RNA1509_30268} {RNA1310_2381} {RNA815_861} |
| 4. | MligTC455_12563 | 27 | 0.57 | Mlig455_033904 | Neo: - Age: - Region-enriched R5: 3.114/0.04313 |
0.969 | - | - | - | 0.969 | - | - | Mlig455_033904 {REF} {Length: 660} {RNA1310_69364} {RNA815_35056} | |
| 5. | MligTC455_49482 | 141 | 2.93 | Mlig455_025488, Mlig455_025510 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=1.130 Region-enriched R7: 2.725/0.03700 |
0.968 | - | - | 0.968 | - | - | - | Mlig455_025488 {REF} {Length: 729} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [Score=65.1, Expect=8e-15]} {RNA1509_30340} {RNA1310_59879} {RNA815_30690} Mlig455_025510 {REF} {Length: 553} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [Score=65.1, Expect=8e-15]} {RNA1509_30340} {RNA1310_59879} {RNA815_30690} |
|
| 6. | MligTC455_04119 | 32 | 0.66 | Mlig455_001999, Mlig455_002000, Mlig455_002092, Mlig455_002203 | Neo: - Age: - |
0.962 | - | - | 0.962 | - | - | - | Mlig455_001999 {REF} {Length: 756} {NoTransDecoderORF} Mlig455_002000 {REF} {Length: 1382} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=28.6]} {RNA1310_90701} {RNA815_43200} Mlig455_002092 {REF} {Length: 3588} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=28.6]} {RNA1310_90701} {RNA815_43200} Mlig455_002203 {REF} {Length: 3255} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=28.3]} {RNA1310_90701} {RNA815_43200} |
|
| 7. | MligTC455_52963 | 94 | 1.95 | Mlig455_019424, Mlig455_058390 | Neo: Int S/G2/M Age: - |
ZC3H3 | 0.96 | - | - | 0.960 | - | - | - | Mlig455_019424 {REF} {Length: 3114} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=23.1]} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [RH, Score=95.9, Expect=7e-21]} {Mouse: ENSMUSG00000075600, Zc3h3, zinc finger CCCH type containing 3, [RH, Score=100, Expect=2e-22]} {Dmel: FBgn0035900, ZC3H3, [RH, Score=67.0, Expect=9e-12]} {RNA1509_37082} {RNA1310_10963.2} {RNA815_18673} Mlig455_058390 {REF} {Length: 2783} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=24.1]} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [RH, Score=96.3, Expect=6e-21]} {Mouse: ENSMUSG00000075600, Zc3h3, zinc finger CCCH type containing 3, [RH, Score=99.8, Expect=3e-22]} {Dmel: FBgn0035900, ZC3H3, [RH, Score=67.4, Expect=6e-12]} {RNA1509_34328} {RNA1310_10963.2} {RNA815_18673} |
| 8. | MligTC455_51212 | 300 | 6.24 | Mlig455_007565, Mlig455_030549 | Neo: - Age: - |
PROX1 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_007565 {REF} {Length: 7078} {Pfam: Homeo-prospero domain [PF05044.14, score=269.2]} {Human: ENSG00000117707, PROX1, prospero homeobox 1, [RH, Score=227, Expect=2e-64]} {Mouse: ENSMUSG00000010175, Prox1, prospero homeobox 1, [RH, Score=227, Expect=2e-64]; ENSMUSG00000042320, Prox2, prospero homeobox 2, [RH, Score=221, Expect=2e-63]} {Dmel: FBgn0004595, pros, prospero, [RH, Score=280, Expect=4e-81]} {Celegans: WBGene00000448, pros-1, Homeobox protein prospero homolog 1, [RH, Score=238, Expect=6e-70]} {Smed: dd_Smed_v6_13772_0_1, dd_Smed_v6_13772_0_1, [RH, Score=210, Expect=1e-60]} {RNA1509_45128} {RNA1310_18498.1, RNA1509_45128} {RNA1509_45128, RNA815_23560} Mlig455_030549 {REF} {Length: 3353} {Pfam: Homeo-prospero domain [PF05044.14, score=268.4]} {Human: ENSG00000117707, PROX1, prospero homeobox 1, [RH, Score=228, Expect=6e-63]} {Mouse: ENSMUSG00000010175, Prox1, prospero homeobox 1, [RH, Score=227, Expect=5e-63]; ENSMUSG00000042320, Prox2, prospero homeobox 2, [RH, Score=221, Expect=7e-62]} {Dmel: FBgn0004595, pros, prospero, [RH, Score=282, Expect=2e-79]} {Celegans: WBGene00000448, pros-1, Homeobox protein prospero homolog 1, [RH, Score=239, Expect=1e-68]} {Smed: dd_Smed_v6_13772_0_1, dd_Smed_v6_13772_0_1, [RH, Score=211, Expect=1e-59]} {RNA1509_45128} {RNA1310_18498.1} {RNA815_23560} |
| 9. | MligTC455_17922 | 122 | 2.54 | Mlig455_053273 | Neo: - Age: Down-Up-Down |
0.957 | - | - | 0.957 | - | - | - | Mlig455_053273 {REF} {Length: 2278} {RNA1509_28508} {RNA1310_1041.1} {RNA815_12016} | |
| 10. | MligTC455_14306 | 49 | 1.02 | Mlig455_040652, Mlig455_062065 | Neo: - Age: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_040652 {REF} {Length: 1154} {NoTransDecoderORF} {RNA1509_52052} {RNA1310_51938} {RNA815_453.1} Mlig455_062065 {REF} {Length: 1349} {NoTransDecoderORF} {RNA1509_52052} {RNA1310_51938} {RNA815_453.1} |
|
| 11. | MligTC455_41966 | 75 | 1.57 | Mlig455_069844 | Neo: - Age: Down-Up-Up |
GABRA6 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_069844 {REF} {Length: 3175} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=102.1]} {Human: ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [RH, Score=299, Expect=1e-95]; ENSG00000109158, GABRA4, gamma-aminobutyric acid type A receptor alpha4 subunit, [RH, Score=288, Expect=3e-90]; ENSG00000186297, GABRA5, gamma-aminobutyric acid type A receptor alpha5 subunit, [RH, Score=286, Expect=2e-90]} {Mouse: ENSMUSG00000020428, Gabra6, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6, [RH, Score=308, Expect=2e-99]; ENSMUSG00000055078, Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5, [RH, Score=295, Expect=3e-94]} {Dmel: FBgn0030707, CG8916, [RH, Score=387, Expect=5e-128]} {Celegans: WBGene00013914, lgc-37, Ligand-Gated ion Channel, [RH, Score=303, Expect=4e-97]} {Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=367, Expect=3e-123]} {RNA1509_52113} {RNA1310_20592, RNA1509_52113} {RNA1509_52113, RNA815_40535} |
| 12. | MligTC455_12744 | 227 | 4.72 | Mlig455_039893 | Neo: Irradiation Age: Down-Up-Down |
PHRF1 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_039893 {REF} {Length: 4208} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=47.9]; Ring finger domain [PF13639.8, score=42.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.8]; PHD-finger [PF13831.8, score=18.9]} {Human: ENSG00000070047, PHRF1, PHD and ring finger domains 1, [RH, Score=122, Expect=1e-27]; ENSG00000274780, PHRF1, PHD and ring finger domains 1, [RH, Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000038611, Phrf1, PHD and ring finger domains 1, [RH, Score=118, Expect=2e-26]} {Dmel: FBgn0037344, CG2926, [RH, Score=110, Expect=5e-24]} {Celegans: WBGene00001470, baz-2, Bromodomain Adjacent to Zinc finger domain, 2A/2B, homolog, [Score=58.9, Expect=1e-08]} {Smed: dd_Smed_v6_12548_0_1, dd_Smed_v6_12548_0_1, [RH, Score=132, Expect=3e-31]} {RNA1509_14891} {RNA1310_3964.1, RNA1509_14891} {RNA1509_14891, RNA815_13171} |
| 13. | MligTC455_39812 | 95 | 1.98 | Mlig455_045935 | Neo: - Age: - |
SLC17A8 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_045935 {REF} {Length: 3220} {Pfam: Major Facilitator Superfamily [PF07690.18, score=170.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=20.5]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [RH, Score=540, Expect=0.0]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [RH, Score=540, Expect=0.0]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [RH, Score=529, Expect=0.0]} {Mouse: ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [RH, Score=543, Expect=0.0]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [RH, Score=541, Expect=0.0]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [RH, Score=492, Expect=1e-166]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [RH, Score=476, Expect=2e-161]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_38152} {RNA1310_33327} {RNA815_25224} |
| 14. | MligTC455_27329 | 53 | 1.1 | Mlig455_027779, Mlig455_063482 | Neo: - Age: Down-Down-Down |
0.951 | - | - | 0.951 | - | - | - | Mlig455_027779 {REF} {Length: 621} {NoTransDecoderORF} {RNA1310_134251} {RNA815_21359} Mlig455_063482 {REF} {Length: 3434} {Pfam: TIR domain [PF13676.8, score=60.3]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=140, Expect=2e-34]} {RNA1509_39812} {RNA1310_13757.1} {RNA815_21359} |
|
| 15. | MligTC455_37748 | 123 | 2.56 | Mlig455_012702, Mlig455_033010 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_012702 {REF} {Length: 2807} {Smed: dd_Smed_v6_32414_0_1, dd_Smed_v6_32414_0_1, [Score=87.0, Expect=4e-18]} {RNA1509_52343} {RNA1310_5679} {RNA815_10252} Mlig455_033010 {REF} {Length: 3464} {Smed: dd_Smed_v6_13730_0_1, dd_Smed_v6_13730_0_1, [Score=174, Expect=4e-45]} {RNA1509_52343} {RNA1310_5679} {RNA815_10252} |
|
| 16. | MligTC455_45872 | 41 | 0.84 | Mlig455_044122 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_044122 {REF} {Length: 624} {NoTransDecoderORF} | |
| 17. | MligTC455_39813 | 75 | 1.57 | Mlig455_045961 | Neo: - Age: - |
SLC17A8 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_045961 {REF} {Length: 3015} {Pfam: Major Facilitator Superfamily [PF07690.18, score=170.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=20.5]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [RH, Score=540, Expect=0.0]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [RH, Score=540, Expect=0.0]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [RH, Score=529, Expect=0.0]} {Mouse: ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [RH, Score=543, Expect=0.0]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [RH, Score=541, Expect=0.0]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [RH, Score=492, Expect=1e-166]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [RH, Score=476, Expect=2e-161]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_53919} {RNA1310_33327} {RNA815_42042} |
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