Data search
Results for MligTC455_42008
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42008 | 505 | 10.53 | Mlig455_065161 | Neo: - |
RAB19 | Mlig455_065161 {REF} {Length: 2259} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=182.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=110.7]; ADP-ribosylation factor family [PF00025.23, score=45.2]; 50S ribosome-binding GTPase [PF01926.25, score=20.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000146955, RAB19, RAB19, member RAS oncogene family, [RH, Score=209, Expect=3e-68]} {Mouse: ENSMUSG00000030055, Rab43, RAB43, member RAS oncogene family, [Score=211, Expect=3e-69]; ENSMUSG00000029923, Rab19, RAB19, member RAS oncogene family, [Score=202, Expect=1e-65]} {Dmel: FBgn0015793, Rab19, [Score=199, Expect=1e-64]} {Celegans: WBGene00004278, rab-19, RAB family, [Score=204, Expect=6e-67]} {Smed: dd_Smed_v6_2494_0_1, dd_Smed_v6_2494_0_1, [Score=223, Expect=2e-74]} {RNA1509_24203, RNA1509_47323, RNA1509_58847} {RNA1310_38772.1, RNA1509_24203, RNA1509_47323, RNA1509_58847} {RNA1509_24203, RNA1509_47323, RNA1509_58847, RNA815_20749} |
Cumulative graph for MligTC455_42008
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.388 | 3.77 | 0.74921 | 1.00000 | |
| RegionR2 | 0.43 | 3.77 | 0.43237 | 0.82270 | |
| RegionR3 | 0.565 | 3.77 | 0.18905 | 0.72516 | |
| RegionR4 | 0.784 | 3.77 | 0.12846 | 0.36256 | |
| RegionR5 | 0.663 | 3.77 | 0.10472 | 0.31464 | |
| RegionR6 | 0.104 | 3.77 | 0.81916 | 1.00000 | |
| RegionR7 | -1.402 | 3.77 | 0.03843 | 0.37580 | |
| RegionR8 | -0.756 | 3.77 | 0.28963 | 0.91741 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.643 | 3.77 | 0.13121 | 0.86336 | |
| RegenerationR2 | 0.101 | 3.77 | 0.82180 | 0.99544 | |
| RegenerationR3 | -0.307 | 3.77 | 0.53980 | 0.87750 | |
| RegenerationR4 | -0.104 | 3.77 | 0.84093 | 1.00000 | |
| RegenerationR5 | -0.116 | 3.77 | 0.80513 | 0.98981 | |
| RegenerationR6 | -0.339 | 3.77 | 0.53521 | 0.83012 | |
| RegenerationBL | 0.459 | 3.77 | 0.48230 | 0.84721 | |
| RegenerationTP | 0.31 | 3.77 | 0.67690 | 1.00000 |
Genes with expression patterns similar to MligTC455_42008
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42008 | 505 | 10.53 | Mlig455_065161 | Neo: - |
RAB19 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065161 {REF} {Length: 2259} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=182.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=110.7]; ADP-ribosylation factor family [PF00025.23, score=45.2]; 50S ribosome-binding GTPase [PF01926.25, score=20.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000146955, RAB19, RAB19, member RAS oncogene family, [RH, Score=209, Expect=3e-68]} {Mouse: ENSMUSG00000030055, Rab43, RAB43, member RAS oncogene family, [Score=211, Expect=3e-69]; ENSMUSG00000029923, Rab19, RAB19, member RAS oncogene family, [Score=202, Expect=1e-65]} {Dmel: FBgn0015793, Rab19, [Score=199, Expect=1e-64]} {Celegans: WBGene00004278, rab-19, RAB family, [Score=204, Expect=6e-67]} {Smed: dd_Smed_v6_2494_0_1, dd_Smed_v6_2494_0_1, [Score=223, Expect=2e-74]} {RNA1509_24203, RNA1509_47323, RNA1509_58847} {RNA1310_38772.1, RNA1509_24203, RNA1509_47323, RNA1509_58847} {RNA1509_24203, RNA1509_47323, RNA1509_58847, RNA815_20749} |
| 2. | MligTC455_25684 | 191 | 3.99 | Mlig455_005063 | Neo: - Age: Down-Down-Up |
MED21 | 0.962 | - | - | 0.962 | - | - | - | Mlig455_005063 {REF} {Length: 919} {TRANSSPLICED} {Pfam: Subunit 21 of Mediator complex [PF11221.10, score=76.3]} {Human: ENSG00000152944, MED21, mediator complex subunit 21, [RH, Score=90.9, Expect=2e-23]} {Mouse: ENSMUSG00000030291, Med21, mediator complex subunit 21, [RH, Score=91.3, Expect=6e-24]} {Dmel: FBgn0040020, MED21, Mediator complex subunit 21, [RH, Score=85.9, Expect=5e-22]} {Celegans: WBGene00007704, mdt-21, Mediator of RNA polymerase II transcription subunit 21, [RH, Score=49.7, Expect=3e-08]} {RNA1509_27093} {RNA1310_34223} {RNA815_18272} |
| 3. | MligTC455_30978 | 74 | 1.55 | Mlig455_019425 | Neo: - Age: Down-Up-Down |
0.957 | - | - | 0.957 | - | - | - | Mlig455_019425 {REF} {Length: 2036} {TRANSSPLICED} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [Score=56.6, Expect=6e-08]} {RNA1509_46251} {RNA1310_15457} {RNA815_6031} |
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