TomoSeq data search

Data search

Results for MligTC455_25684

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25684

191

3.99

Mlig455_005063

Neo: -

Age: Down-Down-Up

MED21

Mlig455_005063 {REF} {Length: 919} {TRANSSPLICED} {Pfam: Subunit 21 of Mediator complex [PF11221.10, score=76.3]} {Human: ENSG00000152944, MED21, mediator complex subunit 21, [RH, Score=90.9, Expect=2e-23]} {Mouse: ENSMUSG00000030291, Med21, mediator complex subunit 21, [RH, Score=91.3, Expect=6e-24]} {Dmel: FBgn0040020, MED21, Mediator complex subunit 21, [RH, Score=85.9, Expect=5e-22]} {Celegans: WBGene00007704, mdt-21, Mediator of RNA polymerase II transcription subunit 21, [RH, Score=49.7, Expect=3e-08]} {RNA1509_27093} {RNA1310_34223} {RNA815_18272}

Cumulative graph for MligTC455_25684

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.071	2.681	0.95309	1.00000
RegionR2	1.568	2.681	0.02315	0.16868
RegionR3	0.008	2.681	0.98190	1.00000
RegionR4	-1.108	2.681	0.09370	0.29453
RegionR5	0.473	2.681	0.24430	0.55737
RegionR6	-0.527	2.681	0.33848	0.92570
RegionR7	0.053	2.681	0.93952	1.00000
RegionR8	-0.397	2.681	0.71114	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.654	2.681	0.55310	1.00000
RegenerationR2	-0.494	2.681	0.42705	0.83205
RegenerationR3	1.416	2.681	0.01838	0.24788
RegenerationR4	0.916	2.681	0.16335	0.59717
RegenerationR5	0.488	2.681	0.31373	0.73885
RegenerationR6	1.4	2.681	0.05133	0.28401
RegenerationBL	0.241	2.681	0.86235	1.00000
RegenerationTP	0.704	2.681	0.48669	0.89319

Genes with expression patterns similar to MligTC455_25684

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25684	191	3.99	Mlig455_005063	Neo: - Age: Down-Down-Up	MED21	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005063 {REF} {Length: 919} {TRANSSPLICED} {Pfam: Subunit 21 of Mediator complex [PF11221.10, score=76.3]} {Human: ENSG00000152944, MED21, mediator complex subunit 21, [RH, Score=90.9, Expect=2e-23]} {Mouse: ENSMUSG00000030291, Med21, mediator complex subunit 21, [RH, Score=91.3, Expect=6e-24]} {Dmel: FBgn0040020, MED21, Mediator complex subunit 21, [RH, Score=85.9, Expect=5e-22]} {Celegans: WBGene00007704, mdt-21, Mediator of RNA polymerase II transcription subunit 21, [RH, Score=49.7, Expect=3e-08]} {RNA1509_27093} {RNA1310_34223} {RNA815_18272}
2.	MligTC455_16076	218	4.53	Mlig455_033150	Neo: - Age: -	ASNSD1	1.812	-	-	0.860	-	0.952	-	Mlig455_033150 {REF} {Length: 874} {Pfam: Asparagine synthase [PF00733.23, score=86.0]} {Human: ENSG00000138381, ASNSD1, asparagine synthetase domain containing 1, [RH, Score=361, Expect=6e-116]} {Mouse: ENSMUSG00000026095, Asnsd1, asparagine synthetase domain containing 1, [RH, Score=372, Expect=2e-120]} {Dmel: FBgn0032997, CG17486, [RH, Score=234, Expect=7e-69]} {Celegans: WBGene00010889, M18.3, [RH, Score=179, Expect=2e-49]} {Smed: dd_Smed_v6_11324_0_1, dd_Smed_v6_11324_0_1, [RH, Score=259, Expect=2e-80]} {RNA1509_19123} {RNA1310_13339} {RNA815_27172}
3.	MligTC455_40825	836	17.42	Mlig455_051488	Neo: Irradiation Age: Down-Down-Up	ZNHIT1	1.722	0.763	-	-	-	0.959	-	Mlig455_051488 {REF} {Length: 722} {TRANSSPLICED} {Pfam: HIT zinc finger [PF04438.18, score=29.0]} {Human: ENSG00000106400, ZNHIT1, zinc finger HIT-type containing 1, [RH, Score=115, Expect=2e-32]} {Mouse: ENSMUSG00000059518, Znhit1, zinc finger, HIT domain containing 1, [RH, Score=114, Expect=2e-32]} {Dmel: FBgn0031668, CG31917, [RH, Score=119, Expect=2e-34]} {Celegans: WBGene00016992, zhit-1, Zinc finger, HIT-type, [RH, Score=100, Expect=8e-27]} {Smed: dd_Smed_v6_10876_0_1, dd_Smed_v6_10876_0_1, [RH, Score=118, Expect=3e-34]} {RNA1509_24528} {RNA1310_2303, RNA1509_24528} {RNA1509_24528, RNA815_51296}
4.	MligTC455_43951	218	4.55	Mlig455_007315	Neo: - Age: -	NEMP2	0.963	-	-	0.963	-	-	-	Mlig455_007315 {REF} {Length: 2661} {TRANSSPLICED} {Pfam: NEMP family [PF10225.11, score=163.5]} {Human: ENSG00000189362, NEMP2, nuclear envelope integral membrane protein 2, [RH, Score=103, Expect=2e-23]; ENSG00000166881, NEMP1, nuclear envelope integral membrane protein 1, [RH, Score=102, Expect=9e-23]} {Mouse: ENSMUSG00000043015, Nemp2, nuclear envelope integral membrane protein 2, [RH, Score=77.0, Expect=1e-14]} {RNA1509_26871, RNA1509_42654} {RNA1310_10680, RNA1509_26871, RNA1509_42654} {RNA1509_26871, RNA1509_42654, RNA815_39512}
5.	MligTC455_42008	505	10.53	Mlig455_065161	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.429	RAB19	0.962	-	-	0.962	-	-	-	Mlig455_065161 {REF} {Length: 2259} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=182.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=110.7]; ADP-ribosylation factor family [PF00025.23, score=45.2]; 50S ribosome-binding GTPase [PF01926.25, score=20.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000146955, RAB19, RAB19, member RAS oncogene family, [RH, Score=209, Expect=3e-68]} {Mouse: ENSMUSG00000030055, Rab43, RAB43, member RAS oncogene family, [Score=211, Expect=3e-69]; ENSMUSG00000029923, Rab19, RAB19, member RAS oncogene family, [Score=202, Expect=1e-65]} {Dmel: FBgn0015793, Rab19, [Score=199, Expect=1e-64]} {Celegans: WBGene00004278, rab-19, RAB family, [Score=204, Expect=6e-67]} {Smed: dd_Smed_v6_2494_0_1, dd_Smed_v6_2494_0_1, [Score=223, Expect=2e-74]} {RNA1509_24203, RNA1509_47323, RNA1509_58847} {RNA1310_38772.1, RNA1509_24203, RNA1509_47323, RNA1509_58847} {RNA1509_24203, RNA1509_47323, RNA1509_58847, RNA815_20749}
6.	MligTC455_30978	74	1.55	Mlig455_019425	Neo: - Age: Down-Up-Down		0.961	-	-	0.961	-	-	-	Mlig455_019425 {REF} {Length: 2036} {TRANSSPLICED} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [Score=56.6, Expect=6e-08]} {RNA1509_46251} {RNA1310_15457} {RNA815_6031}
7.	MligTC455_17120	139	2.9	Mlig455_027978	Neo: - Age: Down-Up-Up	PCMT1	0.955	-	-	-	-	0.955	-	Mlig455_027978 {REF} {Length: 870} {TRANSSPLICED} {Pfam: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=216.0]; Methyltransferase domain [PF13847.8, score=31.6]; Methyltransferase domain [PF13649.8, score=26.6]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=23.1]; Methyltransferase domain [PF08241.14, score=21.4]; Methyltransferase domain [PF13679.8, score=19.7]} {Human: ENSG00000120265, PCMT1, protein-L-isoaspartate (D-aspartate) O-methyltransferase, [Score=205, Expect=3e-66]} {Mouse: ENSMUSG00000116405, Pcmt1, protein-L-isoaspartate (D-aspartate) O-methyltransferase 1, [Score=202, Expect=9e-65]; ENSMUSG00000019795, Pcmt1, protein-L-isoaspartate (D-aspartate) O-methyltransferase 1, [Score=202, Expect=9e-65]} {Dmel: FBgn0086768, Pcmt, Protein-L-isoaspartate (D-aspartate) O-methyltransferase, [Score=184, Expect=3e-58]} {Celegans: WBGene00003954, pcm-1, Protein-L-isoaspartate O-methyltransferase, [Score=189, Expect=3e-60]} {Smed: dd_Smed_v6_6199_0_1, dd_Smed_v6_6199_0_1, [Score=186, Expect=6e-59]} {RNA1310_30151} {RNA815_54398}
8.	MligTC455_33420	265	5.52	Mlig455_049076	Neo: - Age: -	ABCC1	0.953	-	-	-	-	0.953	-	Mlig455_049076 {REF} {Length: 6156} {Pfam: ABC transporter transmembrane region [PF00664.25, score=231.1]; ABC transporter [PF00005.29, score=170.0]; RecF/RecN/SMC N terminal domain [PF02463.21, score=39.7]; AAA ATPase domain [PF13191.8, score=24.5]; 50S ribosome-binding GTPase [PF01926.25, score=23.5]; Dynamin family [PF00350.25, score=20.9]} {Human: ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=1173, Expect=0.0]; ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=1173, Expect=0.0]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=1159, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=1218, Expect=0.0]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=1179, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=1131, Expect=0.0]} {Celegans: WBGene00003408, mrp-2, Multidrug resistance related protein 2, [Score=1018, Expect=0.0]} {Smed: dd_Smed_v6_9208_0_1, dd_Smed_v6_9208_0_1, [RH, Score=1146, Expect=0.0]} {RNA1509_18907, RNA1509_9357} {RNA1310_359.1, RNA1509_18907, RNA1509_9357} {RNA1509_18907, RNA1509_9357, RNA815_6169}
9.	MligTC455_18452	224	4.66	Mlig455_057585	Neo: - Age: -	SLC25A19	0.952	-	-	-	0.952	-	-	Mlig455_057585 {REF} {Length: 2123} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=175.6]; Keratin, high sulfur B2 protein [PF13885.8, score=25.5]} {Human: ENSG00000125454, SLC25A19, solute carrier family 25 member 19, [RH, Score=217, Expect=8e-66]} {Mouse: ENSMUSG00000020744, Slc25a19, solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19, [RH, Score=209, Expect=5e-63]} {Dmel: FBgn0037852, Tpc1, Thiamine pyrophosphate carrier protein 1, [Score=157, Expect=1e-43]} {Celegans: WBGene00016588, hpo-12, [RH, Score=179, Expect=4e-52]} {Smed: dd_Smed_v6_8180_0_1, dd_Smed_v6_8180_0_1, [RH, Score=208, Expect=4e-63]} {RNA1509_10133} {RNA1310_17797} {RNA815_5564}
10.	MligTC455_30109	210	4.38	Mlig455_068294	Neo: - Age: Down-Up-Down		0.952	-	-	0.952	-	-	-	Mlig455_068294 {REF} {Length: 1617} {TRANSSPLICED} {RNA1509_9107} {RNA1310_13804} {RNA815_857.1}

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