Data search
Results for MligTC455_42019
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42019 | 607 | 12.65 | Mlig455_014008 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.233/0.02621 |
CEP57 | Mlig455_014008 {REF} {Length: 2151} {TRANSSPLICED} {Pfam: Centrosome localisation domain of Cep57 [PF14073.8, score=46.2]} {Human: ENSG00000166037, CEP57, centrosomal protein 57, [RH, Score=48.9, Expect=4e-06]} {Mouse: ENSMUSG00000031922, Cep57, centrosomal protein 57, [RH, Score=50.8, Expect=2e-06]} {RNA1509_23343, RNA1509_25169} {RNA1310_18106.2, RNA1509_23343, RNA1509_25169} {RNA1509_23343, RNA1509_25169, RNA815_19709.2} |
Cumulative graph for MligTC455_42019
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.392 | 4.092 | 0.70054 | 1.00000 | |
| RegionR2 | -0.421 | 4.092 | 0.40673 | 0.80060 | |
| RegionR3 | -0.313 | 4.092 | 0.42428 | 0.94634 | |
| RegionR4 | 1.233 | 4.092 | 0.00328 | 0.02621 | |
| RegionR5 | 0.688 | 4.092 | 0.03267 | 0.13792 | |
| RegionR6 | -0.455 | 4.092 | 0.25990 | 0.84767 | |
| RegionR7 | -0.674 | 4.092 | 0.21445 | 0.83087 | |
| RegionR8 | 0.334 | 4.092 | 0.56681 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.783 | 4.092 | 0.10720 | 0.82929 | |
| RegenerationR2 | -0.568 | 4.092 | 0.19711 | 0.64228 | |
| RegenerationR3 | -0.183 | 4.092 | 0.69211 | 0.94515 | |
| RegenerationR4 | -1.194 | 4.092 | 0.00667 | 0.11818 | |
| RegenerationR5 | -0.358 | 4.092 | 0.35263 | 0.76586 | |
| RegenerationR6 | 0.097 | 4.092 | 0.83652 | 0.99412 | |
| RegenerationBL | 0.321 | 4.092 | 0.54779 | 0.90446 | |
| RegenerationTP | -1.106 | 4.092 | 0.10546 | 0.50280 |
Genes with expression patterns similar to MligTC455_42019
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42019 | 607 | 12.65 | Mlig455_014008 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.233/0.02621 |
CEP57 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_014008 {REF} {Length: 2151} {TRANSSPLICED} {Pfam: Centrosome localisation domain of Cep57 [PF14073.8, score=46.2]} {Human: ENSG00000166037, CEP57, centrosomal protein 57, [RH, Score=48.9, Expect=4e-06]} {Mouse: ENSMUSG00000031922, Cep57, centrosomal protein 57, [RH, Score=50.8, Expect=2e-06]} {RNA1509_23343, RNA1509_25169} {RNA1310_18106.2, RNA1509_23343, RNA1509_25169} {RNA1509_23343, RNA1509_25169, RNA815_19709.2} |
| 2. | MligTC455_30301 | 831 | 17.3 | Mlig455_007156 | Neo: Neoblast, stringent Age: Up-Down-Down |
SMC4 | 1.75 | - | - | - | 0.794 | - | 0.956 | Mlig455_007156 {REF} {Length: 5128} {TRANSSPLICED} {Pfam: RecF/RecN/SMC N terminal domain [PF02463.21, score=234.4]; SMC proteins Flexible Hinge Domain [PF06470.15, score=84.9]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=52.2]; AAA ATPase domain [PF13175.8, score=29.6]; AAA domain [PF13476.8, score=22.0]; P-loop containing region of AAA domain [PF13555.8, score=21.6]} {Human: ENSG00000113810, SMC4, structural maintenance of chromosomes 4, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000034349, Smc4, structural maintenance of chromosomes 4, [RH, Score=670, Expect=0.0]} {Dmel: FBgn0015391, glu, gluon, [RH, Score=533, Expect=6e-164]} {Celegans: WBGene00004874, smc-4, Structural maintenance of chromosomes protein 4, [RH, Score=348, Expect=4e-98]} {Smed: dd_Smed_v6_5865_0_4, dd_Smed_v6_5865_0_4, [RH, Score=544, Expect=3e-169]} {RNA1509_15644, RNA1509_23132, RNA1509_3181, RNA1509_32936} {RNA1310_1138.1, RNA1509_15644, RNA1509_23132, RNA1509_3181, RNA1509_32936} {RNA1509_15644, RNA1509_23132, RNA1509_3181, RNA1509_32936, RNA815_2120} |
Berezikov Lab - 2020-2021 © ERIBA