Data search
Results for MligTC455_42029
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42029 | 61 | 1.28 | Mlig455_020044 | Neo: - Age: - |
HMGCLL1 | Mlig455_020044 {REF} {Length: 2499} {TRANSSPLICED} {Pfam: HMGL-like [PF00682.21, score=166.2]} {Human: ENSG00000146151, HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, [RH, Score=325, Expect=3e-110]; ENSG00000117305, HMGCL, 3-hydroxy-3-methylglutaryl-CoA lyase, [RH, Score=324, Expect=4e-110]} {Mouse: ENSMUSG00000028672, Hmgcl, 3-hydroxy-3-methylglutaryl-Coenzyme A lyase, [RH, Score=332, Expect=3e-113]; ENSMUSG00000007908, Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1, [RH, Score=327, Expect=4e-111]} {Dmel: FBgn0031877, CG10399, [RH, Score=318, Expect=4e-108]} {Celegans: WBGene00022150, Y71G12B.10, [RH, Score=271, Expect=9e-90]} {Smed: dd_Smed_v6_5547_0_1, dd_Smed_v6_5547_0_1, [RH, Score=287, Expect=2e-96]} {RNA1509_48953, RNA1509_54566} {RNA1310_3243, RNA1509_48953, RNA1509_54566} {RNA1509_48953, RNA1509_54566, RNA815_27742} |
Cumulative graph for MligTC455_42029
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.794 | 1.346 | 0.99977 | 1.00000 | |
| RegionR2 | -0.798 | 1.346 | 0.93179 | 1.00000 | |
| RegionR3 | -0.07 | 1.346 | 0.86600 | 1.00000 | |
| RegionR4 | 3.676 | 1.346 | 0.01217 | 0.07068 | |
| RegionR5 | 1.918 | 1.346 | 0.22582 | 0.53027 | |
| RegionR6 | 2.324 | 1.346 | 0.09036 | 0.55260 | |
| RegionR7 | 1.353 | 1.346 | 0.42045 | 1.00000 | |
| RegionR8 | -2.61 | 1.346 | 0.99988 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.856 | 1.346 | 0.99953 | 1.00000 | |
| RegenerationR2 | 0.979 | 1.346 | 0.34070 | 0.77550 | |
| RegenerationR3 | 0.017 | 1.346 | 0.86370 | 1.00000 | |
| RegenerationR4 | 0.213 | 1.346 | 0.84497 | 1.00000 | |
| RegenerationR5 | 0.325 | 1.346 | 0.71920 | 0.95909 | |
| RegenerationR6 | -1.904 | 1.346 | 0.12044 | 0.42709 | |
| RegenerationBL | 0.74 | 1.346 | 0.65896 | 0.99396 | |
| RegenerationTP | 1.982 | 1.346 | 0.42422 | 0.84731 |
Genes with expression patterns similar to MligTC455_42029
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42029 | 61 | 1.28 | Mlig455_020044 | Neo: - Age: - |
HMGCLL1 | 4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020044 {REF} {Length: 2499} {TRANSSPLICED} {Pfam: HMGL-like [PF00682.21, score=166.2]} {Human: ENSG00000146151, HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, [RH, Score=325, Expect=3e-110]; ENSG00000117305, HMGCL, 3-hydroxy-3-methylglutaryl-CoA lyase, [RH, Score=324, Expect=4e-110]} {Mouse: ENSMUSG00000028672, Hmgcl, 3-hydroxy-3-methylglutaryl-Coenzyme A lyase, [RH, Score=332, Expect=3e-113]; ENSMUSG00000007908, Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1, [RH, Score=327, Expect=4e-111]} {Dmel: FBgn0031877, CG10399, [RH, Score=318, Expect=4e-108]} {Celegans: WBGene00022150, Y71G12B.10, [RH, Score=271, Expect=9e-90]} {Smed: dd_Smed_v6_5547_0_1, dd_Smed_v6_5547_0_1, [RH, Score=287, Expect=2e-96]} {RNA1509_48953, RNA1509_54566} {RNA1310_3243, RNA1509_48953, RNA1509_54566} {RNA1509_48953, RNA1509_54566, RNA815_27742} |
| 2. | MligTC455_39296 | 144 | 2.99 | Mlig455_011714, Mlig455_026830, Mlig455_038021, Mlig455_057425 | Neo: Germline Age: Up-Down-Down Region-enriched R2: 4.786/0.04939 |
1.653 | - | - | - | - | 0.952 | 0.701 | Mlig455_011714 {REF} {Length: 3110} {Pfam: Transposase protein [PF12017.10, score=74.1]; THAP domain [PF05485.14, score=36.7]} {RNA1509_56557} {RNA1310_11302, RNA1509_56557} {RNA1509_56557, RNA815_17021} Mlig455_026830 {REF} {Length: 1916} {Pfam: Transposase protein [PF12017.10, score=43.7]} {RNA1509_56557} {RNA1310_48290} {RNA815_17021} Mlig455_038021 {REF} {Length: 3107} {Pfam: Transposase protein [PF12017.10, score=73.7]; THAP domain [PF05485.14, score=35.9]} {RNA1509_56557} {RNA1310_11302} {RNA815_17021} Mlig455_057425 {REF} {Length: 3527} {Pfam: Transposase protein [PF12017.10, score=66.6]; THAP domain [PF05485.14, score=35.4]} {RNA1509_56557} {RNA1310_11302} {RNA815_17021} |
|
| 3. | MligTC455_35747 | 14 | 0.3 | Mlig455_044386 | Neo: - Age: Down-Up-Down |
HTR3A | 0.971 | - | - | - | - | 0.971 | - | Mlig455_044386 {REF} {Length: 1966} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=73.0]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=37.0]} {Human: ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=94.7, Expect=1e-20]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=94.4, Expect=1e-20]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=90.1, Expect=2e-19]} {Mouse: ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=95.1, Expect=4e-21]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=94.4, Expect=6e-21]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=105, Expect=1e-24]} {Celegans: WBGene00001133, eat-2, Neuronal acetylcholine receptor subunit eat-2, [Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [Score=98.2, Expect=2e-22]} {RNA1310_56011} {RNA815_22778} |
| 4. | MligTC455_16749 | 454 | 9.45 | Mlig455_001550, Mlig455_046548 | Neo: - Age: logFC(26M/2M)=0.515 Region-specific R2: 4.360 Region-enriched R2: 3.409/0.00015 |
TRAF4 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_001550 {REF} {Length: 4563} {Pfam: TRAF-type zinc finger [PF02176.20, score=81.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.3]; Seven in absentia protein family [PF03145.18, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.4]; zf-RING of BARD1-type protein [PF14835.8, score=20.3]; Ring finger domain [PF13639.8, score=19.5]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=237, Expect=4e-72]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=241, Expect=7e-74]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=164, Expect=1e-44]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=276, Expect=1e-87]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_20900} {RNA1310_14813, RNA1509_20900} {RNA1509_20900, RNA815_2335.1} Mlig455_046548 {REF} {Length: 3881} {Pfam: TRAF-type zinc finger [PF02176.20, score=81.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.3]; Seven in absentia protein family [PF03145.18, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.4]; zf-RING of BARD1-type protein [PF14835.8, score=20.3]; Ring finger domain [PF13639.8, score=19.5]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=236, Expect=1e-71]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=240, Expect=3e-73]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=164, Expect=9e-45]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [RH, Score=275, Expect=6e-87]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [RH, Score=592, Expect=0.0]} {RNA1509_20900} {RNA1310_14813} {RNA815_2335.1} |
| 5. | MligTC455_50260 | 74 | 1.54 | Mlig455_028776 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_028776 {REF} {Length: 1244} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35931} {RNA1310_129842} {RNA815_41286} |