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Results for MligTC455_42146

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42146 360 7.51 Mlig455_047119

Neo: -

Age: Up-Down-Down

 Mlig455_047119 {REF} {Length: 2601} {NoTransDecoderORF} {RNA1509_58586} {RNA1310_47101} {RNA815_25985}

Cumulative graph for MligTC455_42146

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.023 3.349 0.26579 0.91526
RegionR2 0.653 3.349 0.34512 0.73742
RegionR3 0.49 3.349 0.37038 0.90534
RegionR4 -0.463 3.349 0.50416 0.83080
RegionR5 0.674 3.349 0.16292 0.42640
RegionR6 -0.288 3.349 0.63627 1.00000
RegionR7 0.264 3.349 0.69353 1.00000
RegionR8 0.694 3.349 0.34521 0.97829

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.779 3.349 0.55569 1.00000
RegenerationR2 0.394 3.349 0.45905 0.85199
RegenerationR3 -0.066 3.349 0.91679 1.00000
RegenerationR4 0.647 3.349 0.33543 0.76872
RegenerationR5 0.584 3.349 0.28779 0.71573
RegenerationR6 1.504 3.349 0.01707 0.16138
RegenerationBL 0.568 3.349 0.41685 0.78588
RegenerationTP 0.614 3.349 0.38701 0.82067


Genes with expression patterns similar to MligTC455_42146

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42146 360 7.51 Mlig455_047119

Neo: -

Age: Up-Down-Down

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_047119 {REF} {Length: 2601} {NoTransDecoderORF} {RNA1509_58586} {RNA1310_47101} {RNA815_25985}
2. MligTC455_45474 281 5.86 Mlig455_045349

Neo: Int S/G2/M

Age: -

 0.969 - - - - - 0.969 Mlig455_045349 {REF} {Length: 3749} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=37.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.5]} {Mouse: ENSMUSG00000038611, Phrf1, PHD and ring finger domains 1, [Score=50.1, Expect=2e-06]} {RNA1509_44163} {RNA1310_8209.1, RNA1509_44163} {RNA1509_44163, RNA815_13026.1}
3. MligTC455_18591 1024 21.33 Mlig455_001050

Neo: -

Age: logFC(26M/2M)=0.197

 VPS29 0.967 - - - 0.967 - - Mlig455_001050 {REF} {Length: 2720} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase superfamily domain [PF12850.9, score=89.4]; Calcineurin-like phosphoesterase [PF00149.30, score=26.6]} {Human: ENSG00000111237, VPS29, VPS29, retromer complex component, [RH, Score=276, Expect=2e-95]} {Mouse: ENSMUSG00000029462, Vps29, VPS29 retromer complex component, [RH, Score=278, Expect=7e-96]} {Dmel: FBgn0031310, Vps29, Vacuolar protein sorting 29, [RH, Score=257, Expect=4e-88]} {Celegans: WBGene00014234, vps-29, Vacuolar protein sorting-associated protein 29, [RH, Score=246, Expect=1e-83]} {Smed: dd_Smed_v6_1727_0_1, dd_Smed_v6_1727_0_1, [RH, Score=278, Expect=2e-96]} {RNA1509_15958, RNA1509_27578, RNA1509_29968, RNA1509_48195} {RNA1310_19709, RNA1509_15958, RNA1509_27578, RNA1509_29968, RNA1509_48195} {RNA1509_15958, RNA1509_27578, RNA1509_29968, RNA1509_48195, RNA815_19424.1}
4. MligTC455_25070 294 6.12 Mlig455_003268, Mlig455_062829

Neo: -

Age: -

 DDX11 0.959 - - - - - 0.959

Mlig455_003268 {REF} {Length: 4699} {TRANSSPLICED} {Pfam: Helicase C-terminal domain [PF13307.8, score=175.6]; Ku70/Ku80 beta-barrel domain [PF02735.18, score=161.6]; DEAD_2 [PF06733.17, score=132.8]; Ku70/Ku80 N-terminal alpha/beta domain [PF03731.17, score=87.0]; Ku70/Ku80 C-terminal arm [PF03730.16, score=25.3]} {Human: ENSG00000013573, DDX11, DEAD/H-box helicase 11, [RH, Score=459, Expect=4e-143]} {Mouse: ENSMUSG00000035842, Ddx11, DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, [Score=475, Expect=4e-149]} {Dmel: FBgn0026876, CG11403, [RH, Score=250, Expect=5e-69]} {Celegans: WBGene00010839, chl-1, ATP-dependent DNA helicase chl-1, [Score=377, Expect=6e-114]} {Smed: dd_Smed_v6_19858_0_2, dd_Smed_v6_19858_0_2, [Score=365, Expect=1e-109]} {RNA1509_4805} {RNA1310_12398.1} {RNA815_4398}

Mlig455_062829 {REF} {Length: 4704} {TRANSSPLICED} {Pfam: Helicase C-terminal domain [PF13307.8, score=176.2]; Ku70/Ku80 beta-barrel domain [PF02735.18, score=161.6]; DEAD_2 [PF06733.17, score=133.8]; Ku70/Ku80 N-terminal alpha/beta domain [PF03731.17, score=87.0]; Ku70/Ku80 C-terminal arm [PF03730.16, score=29.3]} {Human: ENSG00000013573, DDX11, DEAD/H-box helicase 11, [RH, Score=456, Expect=2e-142]} {Mouse: ENSMUSG00000035842, Ddx11, DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, [Score=474, Expect=9e-149]} {Dmel: FBgn0026876, CG11403, [RH, Score=252, Expect=1e-69]} {Celegans: WBGene00010839, chl-1, ATP-dependent DNA helicase chl-1, [Score=372, Expect=3e-112]} {Smed: dd_Smed_v6_19858_0_2, dd_Smed_v6_19858_0_2, [Score=367, Expect=2e-110]} {RNA1509_4805} {RNA1310_12398.1} {RNA815_4398}
5. MligTC455_45816 482 10.03 Mlig455_066288

Neo: -

Age: logFC(26M/2M)=-0.268

 MARCH1 0.951 - - - - - 0.951 Mlig455_066288 {REF} {Length: 3916} {Pfam: RING-variant domain [PF12906.9, score=39.1]} {Human: ENSG00000145416, MARCH1, membrane associated ring-CH-type finger 1, [Score=53.9, Expect=2e-07]; ENSG00000099785, MARCH2, membrane associated ring-CH-type finger 2, [Score=53.1, Expect=1e-07]} {Mouse: ENSMUSG00000036469, March1, membrane-associated ring finger (C3HC4) 1, [Score=53.9, Expect=1e-07]; ENSMUSG00000079557, March2, membrane-associated ring finger (C3HC4) 2, [Score=51.6, Expect=3e-07]} {Dmel: FBgn0035983, CG4080, [Score=49.3, Expect=5e-06]} {Celegans: WBGene00013273, marc-5, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [RH, Score=106, Expect=9e-25]} {Smed: dd_Smed_v6_7654_0_1, dd_Smed_v6_7654_0_1, [RH, Score=115, Expect=1e-27]} {RNA1509_19739, RNA1509_19980} {RNA1310_2356, RNA1509_19739, RNA1509_19980} {RNA1509_19739, RNA1509_19980, RNA815_13740.1}

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