TomoSeq data search

Data search

Results for MligTC455_42226

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42226

111

2.31

Mlig455_042466

Neo: -

Age: -

Region-enriched R3: 2.045/0.03030

CPQ

Mlig455_042466 {REF} {Length: 2190} {TRANSSPLICED} {Pfam: Peptidase family M28 [PF04389.19, score=87.5]; Peptidase family M20/M25/M40 [PF01546.30, score=27.2]; PA domain [PF02225.24, score=20.9]} {Human: ENSG00000104324, CPQ, carboxypeptidase Q, [RH, Score=368, Expect=3e-123]} {Mouse: ENSMUSG00000039007, Cpq, carboxypeptidase Q, [RH, Score=372, Expect=5e-125]} {Celegans: WBGene00020082, gcp-2.1, Glutamate carboxypeptidase 2 homolog, [Score=51.6, Expect=9e-07]} {RNA1509_11552, RNA1509_11715, RNA1509_49029} {RNA1310_19598.1, RNA1509_11552, RNA1509_49029} {RNA1509_11552, RNA1509_49029, RNA815_7922}

Cumulative graph for MligTC455_42226

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.067	1.928	0.12321	0.71700
RegionR2	1.572	1.928	0.19270	0.54931
RegionR3	2.045	1.928	0.00102	0.03030
RegionR4	-1.021	1.928	0.96202	1.00000
RegionR5	0.573	1.928	0.41350	0.77300
RegionR6	0.564	1.928	0.54379	1.00000
RegionR7	0.082	1.928	0.98767	1.00000
RegionR8	-5.882	1.928	0.02230	0.29127

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.469	1.928	0.83546	1.00000
RegenerationR2	-0.022	1.928	0.58906	0.91074
RegenerationR3	-0.643	1.928	0.60726	0.91145
RegenerationR4	1.011	1.928	0.11643	0.52125
RegenerationR5	-0.103	1.928	0.31617	0.74049
RegenerationR6	0.206	1.928	0.49707	0.80389
RegenerationBL	4.078	1.928	0.03582	0.21334
RegenerationTP	0.214	1.928	1.00000	1.00000

Genes with expression patterns similar to MligTC455_42226

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42226	111	2.31	Mlig455_042466	Neo: - Age: - Region-enriched R3: 2.045/0.03030	CPQ	3	1.000	1.000	-	-	-	1.000	Mlig455_042466 {REF} {Length: 2190} {TRANSSPLICED} {Pfam: Peptidase family M28 [PF04389.19, score=87.5]; Peptidase family M20/M25/M40 [PF01546.30, score=27.2]; PA domain [PF02225.24, score=20.9]} {Human: ENSG00000104324, CPQ, carboxypeptidase Q, [RH, Score=368, Expect=3e-123]} {Mouse: ENSMUSG00000039007, Cpq, carboxypeptidase Q, [RH, Score=372, Expect=5e-125]} {Celegans: WBGene00020082, gcp-2.1, Glutamate carboxypeptidase 2 homolog, [Score=51.6, Expect=9e-07]} {RNA1509_11552, RNA1509_11715, RNA1509_49029} {RNA1310_19598.1, RNA1509_11552, RNA1509_49029} {RNA1509_11552, RNA1509_49029, RNA815_7922}
2.	MligTC455_45116	160	3.34	Mlig455_013593	Neo: - Age: Down-Up-Down Region-enriched R5: 2.671/0.00707	ZNF277	0.962	-	-	-	-	-	0.962	Mlig455_013593 {REF} {Length: 2093} {TRANSSPLICED} {Pfam: C2H2 type zinc-finger (2 copies) [PF12756.9, score=87.5]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=28.3]} {Human: ENSG00000198839, ZNF277, zinc finger protein 277, [RH, Score=124, Expect=5e-32]} {Mouse: ENSMUSG00000055917, Zfp277, zinc finger protein 277, [RH, Score=118, Expect=8e-29]} {Dmel: FBgn0034814, CG9890, [RH, Score=130, Expect=3e-33]} {Celegans: WBGene00009772, ztf-7, Zinc finger putative Transcription Factor family, [RH, Score=116, Expect=8e-28]} {RNA1509_8883} {RNA1310_20393} {RNA815_9523}
3.	MligTC455_39751	106	2.22	Mlig455_068358	Neo: - Age: - Region-enriched R5: 2.881/0.02724		0.96	-	-	-	-	-	0.960	Mlig455_068358 {REF} {Length: 3597} {NoTransDecoderORF} {RNA1509_47234} {RNA1310_2938.1} {RNA815_14343.2}
4.	MligTC455_11485	67	1.39	Mlig455_071010	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_071010 {REF} {Length: 1261} {NoTransDecoderORF} {RNA1509_50390} {RNA1310_20894} {RNA815_18359}
5.	MligTC455_49481	2896	60.33	Mlig455_061474	Neo: - Age: - Regeneration-upregulated BL: 1.088 Regeneration-enriched BL: 1.088	RBM39	0.957	-	-	-	-	-	0.957	Mlig455_061474 {REF} {Length: 2417} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=137.4]; linker between RRM2 and RRM3 domains in RBM39 protein [PF15519.8, score=59.8]} {Human: ENSG00000131051, RBM39, RNA binding motif protein 39, [RH, Score=365, Expect=2e-119]} {Mouse: ENSMUSG00000027620, Rbm39, RNA binding motif protein 39, [RH, Score=365, Expect=1e-119]} {Dmel: FBgn0031883, Caper, [Score=342, Expect=6e-110]} {Celegans: WBGene00021921, Y55F3AM.3, [RH, Score=259, Expect=2e-78]} {Smed: dd_Smed_v6_1932_0_1, dd_Smed_v6_1932_0_1, [RH, Score=273, Expect=2e-85]} {RNA1509_9704} {RNA1310_3436.2, RNA1509_9704} {RNA1509_9704, RNA815_1081.1}
6.	MligTC455_49547	336	7	Mlig455_028613, Mlig455_028636	Neo: - Age: - Region-enriched R5: 2.009/0.00823	NR1D2	0.956	-	-	-	-	-	0.956	Mlig455_028613 {REF} {Length: 3434} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.3]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=65.5, Expect=2e-10]; ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=64.7, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=66.6, Expect=7e-12]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.2, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=3e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=5e-14]} {RNA1509_56197} {RNA1310_45687.1} {RNA815_27369.1} Mlig455_028636 {REF} {Length: 3603} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=48.7]; Zinc finger, C2H2 type [PF00096.28, score=22.3]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=68.6, Expect=2e-11]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=67.4, Expect=9e-12]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.4, Expect=3e-11]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=66.2, Expect=9e-12]; ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=64.7, Expect=3e-10]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=64.7, Expect=2e-10]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=64.3, Expect=3e-10]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=64.3, Expect=3e-10]} {Dmel: FBgn0031257, CG4133, [RH, Score=68.6, Expect=1e-11]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=74.7, Expect=9e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=73.9, Expect=2e-13]} {RNA1509_36556} {RNA1310_20988} {RNA815_9740}
7.	MligTC455_12675	45	0.94	Mlig455_044227	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_044227 {REF} {Length: 3784} {NoTransDecoderORF} {RNA1509_36089} {RNA1310_47570} {RNA815_9301.1}
8.	MligTC455_22126	136	2.83	Mlig455_000084, Mlig455_063752	Neo: - Age: Down-Down-Up	CPNE5	0.955	-	-	-	-	-	0.955	Mlig455_000084 {REF} {Length: 1547} {Pfam: Copine [PF07002.18, score=178.3]; vWA found in TerF C terminus [PF10138.11, score=21.8]} {Human: ENSG00000124772, CPNE5, copine 5, [Score=105, Expect=2e-25]} {Mouse: ENSMUSG00000024008, Cpne5, copine V, [Score=105, Expect=2e-24]} {Celegans: WBGene00015061, cpna-2, Copine family protein 2, [RH, Score=261, Expect=3e-78]} {Smed: dd_Smed_v6_14045_0_1, dd_Smed_v6_14045_0_1, [Score=92.4, Expect=4e-21]} {RNA1509_37669} {RNA1310_84479} {RNA815_58927} Mlig455_063752 {REF} {Length: 1455} {Pfam: Copine [PF07002.18, score=178.3]; vWA found in TerF C terminus [PF10138.11, score=21.8]} {Human: ENSG00000124772, CPNE5, copine 5, [Score=105, Expect=2e-25]} {Mouse: ENSMUSG00000024008, Cpne5, copine V, [Score=105, Expect=2e-24]} {Celegans: WBGene00015061, cpna-2, Copine family protein 2, [RH, Score=261, Expect=3e-78]} {Smed: dd_Smed_v6_14045_0_1, dd_Smed_v6_14045_0_1, [Score=92.4, Expect=4e-21]} {RNA1310_84479} {RNA815_58927}
9.	MligTC455_24875	169	3.51	Mlig455_024688	Neo: - Age: Up-Down-Down	TRMT1	0.955	-	-	-	-	-	0.955	Mlig455_024688 {REF} {Length: 5380} {TRANSSPLICED} {Pfam: N2,N2-dimethylguanosine tRNA methyltransferase [PF02005.18, score=377.8]; Met-10+ like-protein [PF02475.18, score=24.1]; O-methyltransferase [PF01596.19, score=20.7]; Methyltransferase domain [PF13847.8, score=19.8]} {Human: ENSG00000104907, TRMT1, tRNA methyltransferase 1, [RH, Score=358, Expect=6e-115]} {Mouse: ENSMUSG00000001909, Trmt1, tRNA methyltransferase 1, [RH, Score=377, Expect=3e-122]} {Dmel: FBgn0032430, CG6388, [RH, Score=375, Expect=1e-122]} {Celegans: WBGene00006613, trm-1, tRNA (guanine(26)-N(2))-dimethyltransferase, [RH, Score=340, Expect=5e-110]} {Smed: dd_Smed_v6_10289_0_1, dd_Smed_v6_10289_0_1, [RH, Score=385, Expect=5e-128]} {RNA1509_25954, RNA1509_38572} {RNA1310_16273.1, RNA1509_25954, RNA1509_38572} {RNA1509_25954, RNA1509_38572, RNA815_13455}
10.	MligTC455_48325	409	8.52	Mlig455_017605, Mlig455_058890	Neo: - Age: - Regeneration-upregulated BL: 2.318 Regeneration-enriched BL: 2.318	ZCCHC8	0.954	-	-	-	-	-	0.954	Mlig455_017605 {REF} {Length: 2837} {TRANSSPLICED} {Pfam: PSP [PF04046.18, score=61.7]} {Human: ENSG00000033030, ZCCHC8, zinc finger CCHC-type containing 8, [RH, Score=112, Expect=2e-26]} {Mouse: ENSMUSG00000029427, Zcchc8, zinc finger, CCHC domain containing 8, [RH, Score=108, Expect=6e-25]} {Dmel: FBgn0035021, CG4622, [RH, Score=111, Expect=4e-26]} {Celegans: WBGene00014018, ZK632.11, [RH, Score=80.1, Expect=5e-16]} {Smed: dd_Smed_v6_10360_0_1, dd_Smed_v6_10360_0_1, [RH, Score=95.5, Expect=9e-22]} {RNA1509_52327} {RNA1310_19120, RNA1509_52327} {RNA1509_52327, RNA815_3652} Mlig455_058890 {REF} {Length: 2960} {TRANSSPLICED} {Pfam: PSP [PF04046.18, score=61.7]} {Human: ENSG00000033030, ZCCHC8, zinc finger CCHC-type containing 8, [RH, Score=112, Expect=2e-26]} {Mouse: ENSMUSG00000029427, Zcchc8, zinc finger, CCHC domain containing 8, [RH, Score=108, Expect=6e-25]} {Dmel: FBgn0035021, CG4622, [RH, Score=111, Expect=5e-26]} {Celegans: WBGene00014018, ZK632.11, [RH, Score=80.1, Expect=4e-16]} {Smed: dd_Smed_v6_10360_0_1, dd_Smed_v6_10360_0_1, [RH, Score=95.1, Expect=1e-21]} {RNA1509_28992, RNA1509_49072, RNA1509_52327} {RNA1310_19120, RNA1509_28992, RNA1509_49072} {RNA1509_28992, RNA1509_49072, RNA815_3652}
11.	MligTC455_10194	11	0.23	Mlig455_032671	Neo: - Age: -	ALKBH3	0.953	-	-	-	-	-	0.953	Mlig455_032671 {REF} {Length: 1189} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=89.0]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=100, Expect=1e-23]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=103, Expect=6e-25]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=95.5, Expect=3e-22]} {RNA1509_52195} {RNA1310_39725}
12.	MligTC455_16799	16	0.33	Mlig455_019085	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_019085 {REF} {Length: 1626} {NoTransDecoderORF} {RNA1310_29615} {RNA815_50144.1}
13.	MligTC455_23879	9	0.19	Mlig455_043103	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_043103 {REF} {Length: 267} {NoTransDecoderORF} {RNA1310_94018} {RNA815_57343}

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