Data search
Results for MligTC455_24875
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24875 | 169 | 3.51 | Mlig455_024688 | Neo: - Age: Up-Down-Down |
TRMT1 | Mlig455_024688 {REF} {Length: 5380} {TRANSSPLICED} {Pfam: N2,N2-dimethylguanosine tRNA methyltransferase [PF02005.18, score=377.8]; Met-10+ like-protein [PF02475.18, score=24.1]; O-methyltransferase [PF01596.19, score=20.7]; Methyltransferase domain [PF13847.8, score=19.8]} {Human: ENSG00000104907, TRMT1, tRNA methyltransferase 1, [RH, Score=358, Expect=6e-115]} {Mouse: ENSMUSG00000001909, Trmt1, tRNA methyltransferase 1, [RH, Score=377, Expect=3e-122]} {Dmel: FBgn0032430, CG6388, [RH, Score=375, Expect=1e-122]} {Celegans: WBGene00006613, trm-1, tRNA (guanine(26)-N(2))-dimethyltransferase, [RH, Score=340, Expect=5e-110]} {Smed: dd_Smed_v6_10289_0_1, dd_Smed_v6_10289_0_1, [RH, Score=385, Expect=5e-128]} {RNA1509_25954, RNA1509_38572} {RNA1310_16273.1, RNA1509_25954, RNA1509_38572} {RNA1509_25954, RNA1509_38572, RNA815_13455} |
Cumulative graph for MligTC455_24875
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.367 | 2.412 | 0.41800 | 1.00000 | |
| RegionR2 | 1.44 | 2.412 | 0.08861 | 0.36529 | |
| RegionR3 | 0.104 | 2.412 | 0.86367 | 1.00000 | |
| RegionR4 | -1.469 | 2.412 | 0.07394 | 0.25129 | |
| RegionR5 | -0.509 | 2.412 | 0.34165 | 0.68932 | |
| RegionR6 | -0.021 | 2.412 | 0.97231 | 1.00000 | |
| RegionR7 | 1.171 | 2.412 | 0.10807 | 0.62409 | |
| RegionR8 | 0.651 | 2.412 | 0.52023 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.872 | 2.412 | 0.75272 | 1.00000 | |
| RegenerationR2 | 0.272 | 2.412 | 0.71153 | 0.96051 | |
| RegenerationR3 | 0.078 | 2.412 | 0.91176 | 1.00000 | |
| RegenerationR4 | 1.457 | 2.412 | 0.07715 | 0.44162 | |
| RegenerationR5 | 0.663 | 2.412 | 0.33383 | 0.75400 | |
| RegenerationR6 | 1.324 | 2.412 | 0.11501 | 0.41762 | |
| RegenerationBL | 1.389 | 2.412 | 0.16531 | 0.48796 | |
| RegenerationTP | -4.889 | 2.412 | 0.02682 | 0.27578 |
Genes with expression patterns similar to MligTC455_24875
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24875 | 169 | 3.51 | Mlig455_024688 | Neo: - Age: Up-Down-Down |
TRMT1 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_024688 {REF} {Length: 5380} {TRANSSPLICED} {Pfam: N2,N2-dimethylguanosine tRNA methyltransferase [PF02005.18, score=377.8]; Met-10+ like-protein [PF02475.18, score=24.1]; O-methyltransferase [PF01596.19, score=20.7]; Methyltransferase domain [PF13847.8, score=19.8]} {Human: ENSG00000104907, TRMT1, tRNA methyltransferase 1, [RH, Score=358, Expect=6e-115]} {Mouse: ENSMUSG00000001909, Trmt1, tRNA methyltransferase 1, [RH, Score=377, Expect=3e-122]} {Dmel: FBgn0032430, CG6388, [RH, Score=375, Expect=1e-122]} {Celegans: WBGene00006613, trm-1, tRNA (guanine(26)-N(2))-dimethyltransferase, [RH, Score=340, Expect=5e-110]} {Smed: dd_Smed_v6_10289_0_1, dd_Smed_v6_10289_0_1, [RH, Score=385, Expect=5e-128]} {RNA1509_25954, RNA1509_38572} {RNA1310_16273.1, RNA1509_25954, RNA1509_38572} {RNA1509_25954, RNA1509_38572, RNA815_13455} |
| 2. | MligTC455_24876 | 162 | 3.37 | Mlig455_024713 | Neo: - Age: - |
TRMT1 | 4.936 | 1.000 | 1.000 | - | 0.977 | 1.000 | 0.959 | Mlig455_024713 {REF} {Length: 2723} {TRANSSPLICED} {Pfam: N2,N2-dimethylguanosine tRNA methyltransferase [PF02005.18, score=378.3]; Met-10+ like-protein [PF02475.18, score=24.1]; O-methyltransferase [PF01596.19, score=20.8]; Methyltransferase domain [PF13847.8, score=20.0]} {Human: ENSG00000104907, TRMT1, tRNA methyltransferase 1, [RH, Score=358, Expect=5e-115]} {Mouse: ENSMUSG00000001909, Trmt1, tRNA methyltransferase 1, [RH, Score=376, Expect=3e-122]} {Dmel: FBgn0032430, CG6388, [RH, Score=376, Expect=4e-123]} {Celegans: WBGene00006613, trm-1, tRNA (guanine(26)-N(2))-dimethyltransferase, [RH, Score=340, Expect=5e-110]} {Smed: dd_Smed_v6_10289_0_1, dd_Smed_v6_10289_0_1, [RH, Score=385, Expect=5e-128]} {RNA1509_25954} {RNA1310_16273.1} {RNA815_13455} |
| 3. | MligTC455_17533 | 156 | 3.25 | Mlig455_018291 | Neo: - Age: - |
0.966 | - | - | - | - | - | 0.966 | Mlig455_018291 {REF} {Length: 1866} {TRANSSPLICED} {RNA1509_48476} {RNA1310_24654.1} {RNA815_19410} | |
| 4. | MligTC455_29689 | 33 | 0.68 | Mlig455_038052 | Neo: - Age: logFC(26M/2M)=-0.671 Region-enriched R4: 4.352/0.04314 |
ANKRD50 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_038052 {REF} {Length: 4247} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=103.8]; Ankyrin repeats (many copies) [PF13637.8, score=92.6]; Ankyrin repeat [PF13606.8, score=57.9]; Ankyrin repeats (many copies) [PF13857.8, score=55.9]; Ankyrin repeat [PF00023.32, score=52.5]; Mab-21 protein [PF03281.16, score=38.6]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=102, Expect=4e-21]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=103, Expect=6e-22]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=94.4, Expect=5e-19]} {Celegans: WBGene00012124, T28D6.4, [Score=78.2, Expect=2e-14]} {Smed: dd_Smed_v6_11663_0_4, dd_Smed_v6_11663_0_4, [Score=92.0, Expect=8e-19]} {RNA1509_27730} {RNA1310_24020} {RNA815_2426.1} |
| 5. | MligTC455_13320 | 89 | 1.86 | Mlig455_053529 | Neo: Irradiation |
NYNRIN | 0.957 | - | - | - | - | 0.957 | - | Mlig455_053529 {REF} {Length: 4500} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=69.6]; Integrase zinc binding domain [PF17921.3, score=55.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=50.2]; Integrase core domain [PF00665.28, score=32.1]; Integrase core domain [PF13683.8, score=19.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=67.4, Expect=3e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=67.4, Expect=2e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=70.9, Expect=6e-13]} {RNA1509_23236} {RNA1310_5873, RNA1509_23236} {RNA1509_23236, RNA815_17089} |
| 6. | MligTC455_36605 | 27369 | 570.18 | Mlig455_009517 | Neo: Int S/G2/M |
RPS4X | 0.955 | - | - | - | - | - | 0.955 | Mlig455_009517 {REF} {Length: 1028} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_1299, RNA1509_5828} {RNA1310_34304, RNA1509_1299, RNA1509_5828} {RNA1509_1299, RNA1509_5828, RNA815_15889.1} |
| 7. | MligTC455_39891 | 338 | 7.04 | Mlig455_023376, Mlig455_046955 | Neo: - Age: - |
HIRA | 0.955 | - | - | - | - | - | 0.955 | Mlig455_023376 {REF} {Length: 3916} {TRANSSPLICED} {Pfam: TUP1-like enhancer of split [PF07569.13, score=92.1]; WD domain, G-beta repeat [PF00400.34, score=63.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.6]; HIRA B motif [PF09453.12, score=18.5]} {Human: ENSG00000100084, HIRA, histone cell cycle regulator, [Score=449, Expect=3e-140]} {Mouse: ENSMUSG00000022702, Hira, histone cell cycle regulator, [Score=433, Expect=9e-135]} {Dmel: FBgn0022786, Hira, [RH, Score=361, Expect=7e-108]} {Celegans: WBGene00019627, K10D2.1, Protein HIRA homolog, [RH, Score=216, Expect=5e-58]} {Smed: dd_Smed_v6_11365_0_1, dd_Smed_v6_11365_0_1, [RH, Score=292, Expect=1e-83]} {RNA1509_21457} {RNA1310_15050, RNA1509_21457} {RNA1509_21457, RNA815_26394} Mlig455_046955 {REF} {Length: 3903} {TRANSSPLICED} {Pfam: TUP1-like enhancer of split [PF07569.13, score=95.6]; WD domain, G-beta repeat [PF00400.34, score=64.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.6]; HIRA B motif [PF09453.12, score=18.5]} {Human: ENSG00000100084, HIRA, histone cell cycle regulator, [RH, Score=452, Expect=8e-142]} {Mouse: ENSMUSG00000022702, Hira, histone cell cycle regulator, [Score=434, Expect=8e-135]} {Dmel: FBgn0022786, Hira, [RH, Score=364, Expect=5e-109]} {Celegans: WBGene00019627, K10D2.1, Protein HIRA homolog, [RH, Score=215, Expect=1e-57]} {Smed: dd_Smed_v6_11365_0_1, dd_Smed_v6_11365_0_1, [RH, Score=294, Expect=4e-84]} {RNA1509_21457, RNA1509_58633} {RNA1310_15050, RNA1509_58633} {RNA1509_58633, RNA815_26394} |
| 8. | MligTC455_42226 | 111 | 2.31 | Mlig455_042466 | Neo: - Age: - Region-enriched R3: 2.045/0.03030 |
CPQ | 0.955 | - | - | - | - | - | 0.955 | Mlig455_042466 {REF} {Length: 2190} {TRANSSPLICED} {Pfam: Peptidase family M28 [PF04389.19, score=87.5]; Peptidase family M20/M25/M40 [PF01546.30, score=27.2]; PA domain [PF02225.24, score=20.9]} {Human: ENSG00000104324, CPQ, carboxypeptidase Q, [RH, Score=368, Expect=3e-123]} {Mouse: ENSMUSG00000039007, Cpq, carboxypeptidase Q, [RH, Score=372, Expect=5e-125]} {Celegans: WBGene00020082, gcp-2.1, Glutamate carboxypeptidase 2 homolog, [Score=51.6, Expect=9e-07]} {RNA1509_11552, RNA1509_11715, RNA1509_49029} {RNA1310_19598.1, RNA1509_11552, RNA1509_49029} {RNA1509_11552, RNA1509_49029, RNA815_7922} |
| 9. | MligTC455_49065 | 14 | 0.3 | Mlig455_043341 | Neo: - Age: Up-Down-Down |
0.955 | - | - | - | - | 0.955 | - | Mlig455_043341 {REF} {Length: 1303} {RNA1509_13254} {RNA1310_39169.1} {RNA815_7078} | |
| 10. | MligTC455_49547 | 336 | 7 | Mlig455_028613, Mlig455_028636 | Neo: - Age: - Region-enriched R5: 2.009/0.00823 |
NR1D2 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_028613 {REF} {Length: 3434} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.3]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=65.5, Expect=2e-10]; ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=64.7, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=66.6, Expect=7e-12]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.2, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=3e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=5e-14]} {RNA1509_56197} {RNA1310_45687.1} {RNA815_27369.1} Mlig455_028636 {REF} {Length: 3603} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=48.7]; Zinc finger, C2H2 type [PF00096.28, score=22.3]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=68.6, Expect=2e-11]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=67.4, Expect=9e-12]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.4, Expect=3e-11]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=66.2, Expect=9e-12]; ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=64.7, Expect=3e-10]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=64.7, Expect=2e-10]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=64.3, Expect=3e-10]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=64.3, Expect=3e-10]} {Dmel: FBgn0031257, CG4133, [RH, Score=68.6, Expect=1e-11]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=74.7, Expect=9e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=73.9, Expect=2e-13]} {RNA1509_36556} {RNA1310_20988} {RNA815_9740} |
| 11. | MligTC455_11037 | 4 | 0.07 | Mlig455_015372 | Neo: Germline Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_015372 {REF} {Length: 1729} {TRANSSPLICED} {RNA1509_11322} {RNA1310_10909, RNA1509_11322} {RNA1509_11322, RNA815_6367} | |
| 12. | MligTC455_21511 | 246 | 5.12 | Mlig455_048350 | Neo: - Age: Down-Up-Down |
0.95 | - | - | - | 0.950 | - | - | Mlig455_048350 {REF} {Length: 2093} {TRANSSPLICED} {RNA1509_26493, RNA1509_46397} {RNA1310_9878, RNA1509_46397} {RNA1509_46397, RNA815_24669} |
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