Data search
Results for MligTC455_42268
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42268 | 145 | 3.01 | Mlig455_007210 | Neo: - Age: Down-Down-Up Regeneration-downregulated R2: -6.817 Regeneration-depleted R2: -6.817 |
Mlig455_007210 {REF} {Length: 589} {TRANSSPLICED} {RNA1310_43694} {RNA815_20894} |
Cumulative graph for MligTC455_42268
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.133 | 2.343 | 0.99986 | 1.00000 | |
| RegionR2 | 3.709 | 2.343 | 0.99975 | 1.00000 | |
| RegionR3 | 1.35 | 2.343 | 0.99974 | 1.00000 | |
| RegionR4 | -0.958 | 2.343 | 0.99992 | 1.00000 | |
| RegionR5 | 0.004 | 2.343 | 0.99990 | 1.00000 | |
| RegionR6 | 0.682 | 2.343 | 1.00000 | 1.00000 | |
| RegionR7 | 0.573 | 2.343 | 0.99964 | 1.00000 | |
| RegionR8 | -3.228 | 2.343 | 0.99985 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.631 | 2.343 | 0.99995 | 1.00000 | |
| RegenerationR2 | -6.817 | 2.343 | 0.00000 | 0.00000 | Specific for R2: -6.817 |
| RegenerationR3 | -3.527 | 2.343 | 1.00000 | 1.00000 | |
| RegenerationR4 | -2.79 | 2.343 | 1.00000 | 1.00000 | |
| RegenerationR5 | -2.664 | 2.343 | 0.99971 | 1.00000 | |
| RegenerationR6 | -2.723 | 2.343 | 1.00000 | 1.00000 | |
| RegenerationBL | -2.764 | 2.343 | 0.99989 | 1.00000 | |
| RegenerationTP | -0.288 | 2.343 | 0.99991 | 1.00000 |
Genes with expression patterns similar to MligTC455_42268
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42268 | 145 | 3.01 | Mlig455_007210 | Neo: - Age: Down-Down-Up Regeneration-downregulated R2: -6.817 Regeneration-depleted R2: -6.817 |
2 | - | - | 1.000 | - | 1.000 | - | Mlig455_007210 {REF} {Length: 589} {TRANSSPLICED} {RNA1310_43694} {RNA815_20894} | |
| 2. | MligTC455_54188 | 1224 | 25.51 | Mlig455_011257, Mlig455_011337, Mlig455_011343 | Neo: - Age: logFC(26M/2M)=-0.405 Region-enriched R2: 1.704/0.00045 |
TRPM3 | 0.967 | - | - | 0.967 | - | - | - | Mlig455_011257 {REF} {Length: 4016} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=57.4]; Ankyrin repeats (many copies) [PF13637.8, score=35.7]; Ankyrin repeat [PF13606.8, score=29.0]; Ankyrin repeats (many copies) [PF13857.8, score=19.6]} {RNA1509_6328} {RNA1310_1706} {RNA815_498} Mlig455_011337 {REF} {Length: 4535} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=67.0]; Ankyrin repeats (many copies) [PF13637.8, score=42.0]; Ankyrin repeats (many copies) [PF13857.8, score=34.0]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=85.5, Expect=5e-16]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=83.6, Expect=2e-15]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=83.6, Expect=2e-15]; ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=81.3, Expect=1e-14]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=87.0, Expect=1e-16]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=86.3, Expect=2e-16]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=77.0, Expect=1e-13]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=68.9, Expect=2e-11]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=102, Expect=6e-22]} {RNA1509_6328} {RNA1310_1706, RNA1509_6328} {RNA1509_6328, RNA815_498} Mlig455_011343 {REF} {Length: 5711} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=61.4]; Ankyrin repeats (many copies) [PF13637.8, score=46.8]; Ankyrin repeat [PF00023.32, score=23.9]; Ankyrin repeat [PF13606.8, score=20.5]; Ankyrin repeats (many copies) [PF13857.8, score=20.1]} {RNA1509_6328} {RNA1310_1706} {RNA815_498} |
| 3. | MligTC455_22882 | 665 | 13.86 | Mlig455_051921 | Neo: Irradiation Age: - |
SLC4A8 | 0.964 | - | - | 0.964 | - | - | - | Mlig455_051921 {REF} {Length: 5989} {TRANSSPLICED} {Pfam: HCO3- transporter family [PF00955.23, score=716.3]; Band 3 cytoplasmic domain [PF07565.15, score=290.1]} {Human: ENSG00000050438, SLC4A8, solute carrier family 4 member 8, [RH, Score=964, Expect=0.0]; ENSG00000144290, SLC4A10, solute carrier family 4 member 10, [RH, Score=957, Expect=0.0]; ENSG00000033867, SLC4A7, solute carrier family 4 member 7, [RH, Score=954, Expect=0.0]} {Mouse: ENSMUSG00000023032, Slc4a8, solute carrier family 4 (anion exchanger), member 8, [RH, Score=971, Expect=0.0]; ENSMUSG00000021733, Slc4a7, solute carrier family 4, sodium bicarbonate cotransporter, member 7, [RH, Score=959, Expect=0.0]; ENSMUSG00000026904, Slc4a10, solute carrier family 4, sodium bicarbonate cotransporter-like, member 10, [RH, Score=955, Expect=0.0]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [RH, Score=948, Expect=0.0]} {Celegans: WBGene00009920, abts-1, Anion exchange protein, [RH, Score=866, Expect=0.0]} {Smed: dd_Smed_v6_3003_0_2, dd_Smed_v6_3003_0_2, [RH, Score=1167, Expect=0.0]} {RNA1509_6255} {RNA1310_6265} {RNA815_527.1} |
| 4. | MligTC455_51932 | 416 | 8.66 | Mlig455_024400 | Neo: - Age: - |
CBS | 0.962 | - | - | 0.962 | - | - | - | Mlig455_024400 {REF} {Length: 2381} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=210.9]; CBS domain [PF00571.30, score=47.7]} {Human: ENSG00000160200, CBS, cystathionine-beta-synthase, [RH, Score=615, Expect=0.0]; ENSG00000274276, CBSL, cystathionine-beta-synthase like, [RH, Score=615, Expect=0.0]} {Mouse: ENSMUSG00000024039, Cbs, cystathionine beta-synthase, [RH, Score=619, Expect=0.0]} {Dmel: FBgn0031148, Cbs, centrosomin's beautiful sister, [RH, Score=444, Expect=1e-151]} {Celegans: WBGene00013866, cbs-1, Cystathionine Beta-Synthase, [RH, Score=355, Expect=1e-114]} {Smed: dd_Smed_v6_1585_0_1, dd_Smed_v6_1585_0_1, [RH, Score=641, Expect=0.0]} {RNA1509_36721, RNA1509_49877} {RNA1310_10809, RNA1509_36721, RNA1509_49877} {RNA1509_36721, RNA1509_49877, RNA815_3797.1} |
| 5. | MligTC455_16806 | 674 | 14.05 | Mlig455_035157 | Neo: - Age: logFC(26M/2M)=-0.346 Region-enriched R2: 3.343/0.00027 |
0.961 | - | - | 0.961 | - | - | - | Mlig455_035157 {REF} {Length: 2225} {RNA1509_29674, RNA1509_7880} {RNA1310_2112, RNA1509_29674, RNA1509_7880} {RNA1509_29674, RNA1509_7880, RNA815_5601} | |
| 6. | MligTC455_34723 | 441 | 9.2 | Mlig455_051959 | Neo: - Age: Up-Down-Down |
NIM1K | 0.961 | - | - | 0.961 | - | - | - | Mlig455_051959 {REF} {Length: 3455} {Pfam: Protein kinase domain [PF00069.27, score=116.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=56.1]; Kinase-like [PF14531.8, score=18.5]} {Human: ENSG00000177453, NIM1K, NIM1 serine/threonine protein kinase, [Score=240, Expect=1e-76]} {Mouse: ENSMUSG00000095930, Nim1k, NIM1 serine/threonine protein kinase, [Score=241, Expect=4e-77]} {Dmel: FBgn0031299, CG4629, [Score=152, Expect=3e-42]} {Celegans: WBGene00009867, F49C5.4, [Score=182, Expect=8e-54]} {Smed: dd_Smed_v6_15794_0_1, dd_Smed_v6_15794_0_1, [Score=214, Expect=1e-66]} {RNA1509_24864, RNA1509_26319} {RNA1310_21151.1, RNA1509_24864} {RNA1509_24864, RNA815_8109.1} |
| 7. | MligTC455_30539 | 510 | 10.63 | Mlig455_020638 | Neo: - |
0.959 | - | - | 0.959 | - | - | - | Mlig455_020638 {REF} {Length: 3232} {Smed: dd_Smed_v6_6429_0_1, dd_Smed_v6_6429_0_1, [RH, Score=123, Expect=1e-30]} {RNA1509_3399} {RNA1310_6735.1} {RNA815_2838.1} | |
| 8. | MligTC455_29205 | 321 | 6.69 | Mlig455_052289 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.669 |
ANK1 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_052289 {REF} {Length: 6562} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=364.7]; Ankyrin repeat [PF00023.32, score=234.1]; Ankyrin repeat [PF13606.8, score=222.8]; Ankyrin repeats (many copies) [PF13637.8, score=217.7]; Ankyrin repeats (many copies) [PF13857.8, score=194.7]; PEGA domain [PF08308.13, score=40.5]; Protein of unknown function (DUF3979) [PF13141.8, score=35.2]; QSOX Trx-like domain [PF18108.3, score=21.5]; Mab-21 protein [PF03281.16, score=19.3]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=231, Expect=5e-61]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=228, Expect=3e-60]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=225, Expect=2e-59]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=217, Expect=7e-57]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=207, Expect=4e-54]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=206, Expect=1e-53]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=222, Expect=4e-60]} {RNA1509_39416} {RNA1310_6142.1} {RNA815_6750.1} |
| 9. | MligTC455_51918 | 412 | 8.59 | Mlig455_010427 | Neo: - Age: Down-Up-Down |
PDE9A | 0.955 | - | - | 0.955 | - | - | - | Mlig455_010427 {REF} {Length: 2436} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=236.0]} {Human: ENSG00000160191, PDE9A, phosphodiesterase 9A, [Score=271, Expect=2e-84]} {Mouse: ENSMUSG00000041119, Pde9a, phosphodiesterase 9A, [Score=267, Expect=2e-82]} {Dmel: FBgn0259171, Pde9, Phosphodiesterase 9, [Score=295, Expect=3e-87]} {Celegans: WBGene00020114, pde-4, Probable 3',5'-cyclic phosphodiesterase pde-4, [Score=142, Expect=2e-36]} {Smed: dd_Smed_v6_13304_0_1, dd_Smed_v6_13304_0_1, [Score=289, Expect=8e-91]} {RNA1509_6542} {RNA1310_10283, RNA1509_6542} {RNA1509_6542, RNA815_3792.1} |
| 10. | MligTC455_33979 | 345 | 7.18 | Mlig455_021634, Mlig455_021687 | Neo: - Age: Up-Down-Down Region-enriched R6: 2.317/0.04233 |
FAT4 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_021634 {REF} {Length: 15637} {Pfam: Cadherin domain [PF00028.19, score=1053.7]; Cadherin-like [PF08266.14, score=72.1]; Cadherin-like [PF16184.7, score=70.5]; EGF-like domain [PF00008.29, score=63.5]; Laminin G domain [PF02210.26, score=34.1]; Cadherin prodomain like [PF08758.13, score=32.3]; Human growth factor-like EGF [PF12661.9, score=29.7]; RET Cadherin like domain 1 [PF17756.3, score=23.0]; Calcium-binding EGF domain [PF07645.17, score=20.1]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=1268, Expect=0.0]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [RH, Score=1254, Expect=0.0]} {Dmel: FBgn0001075, ft, fat, [Score=1296, Expect=0.0]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=261, Expect=4e-69]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [RH, Score=739, Expect=0.0]} {RNA1509_5577, RNA1509_58023} {RNA1310_180, RNA1509_58023} {RNA1509_58023, RNA815_3956} Mlig455_021687 {REF} {Length: 14771} {Pfam: Cadherin domain [PF00028.19, score=850.5]; EGF-like domain [PF00008.29, score=64.7]; Cadherin-like [PF08266.14, score=63.5]; Cadherin-like [PF16184.7, score=48.8]; Laminin G domain [PF02210.26, score=33.7]; Human growth factor-like EGF [PF12661.9, score=28.7]; Calcium-binding EGF domain [PF07645.17, score=20.4]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=879, Expect=0.0]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=868, Expect=0.0]} {Dmel: FBgn0001075, ft, fat, [Score=949, Expect=0.0]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=238, Expect=5e-62]} {Smed: dd_Smed_v6_12707_0_1, dd_Smed_v6_12707_0_1, [RH, Score=446, Expect=3e-125]} {RNA1509_5577} {RNA1310_12081} {RNA815_14856} |
| 11. | MligTC455_50055 | 376 | 7.82 | Mlig455_066814 | Neo: - Age: Down-Down-Up |
MPPED2 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_066814 {REF} {Length: 2015} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=46.9]; Calcineurin-like phosphoesterase superfamily domain [PF12850.9, score=27.2]} {Human: ENSG00000066382, MPPED2, metallophosphoesterase domain containing 2, [Score=85.1, Expect=4e-19]} {Mouse: ENSMUSG00000016386, Mpped2, metallophosphoesterase domain containing 2, [Score=85.9, Expect=2e-19]} {Dmel: FBgn0036028, CG16717, [Score=82.0, Expect=3e-18]} {Celegans: WBGene00016101, C25E10.12, UPF0046 protein C25E10.12, [Score=107, Expect=8e-28]} {Smed: dd_Smed_v6_9610_0_1, dd_Smed_v6_9610_0_1, [Score=91.7, Expect=6e-22]} {RNA1509_33309} {RNA1310_21403, RNA1509_33309} {RNA1509_33309, RNA815_21715} |
| 12. | MligTC455_41650 | 752 | 15.67 | Mlig455_020540, Mlig455_020590, Mlig455_020592 | Neo: - Age: - |
ARMC9 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_020540 {REF} {Length: 3118} {TRANSSPLICED} {Human: ENSG00000135931, ARMC9, armadillo repeat containing 9, [RH, Score=537, Expect=0.0]} {Mouse: ENSMUSG00000062590, Armc9, armadillo repeat containing 9, [RH, Score=533, Expect=3e-178]} {Smed: dd_Smed_v6_10926_0_1, dd_Smed_v6_10926_0_1, [RH, Score=498, Expect=8e-166]} {RNA1509_54977, RNA1509_9388} {RNA1310_10290, RNA1509_54977} {RNA1509_54977, RNA815_4141} Mlig455_020590 {REF} {Length: 2939} {TRANSSPLICED} {Human: ENSG00000135931, ARMC9, armadillo repeat containing 9, [RH, Score=539, Expect=0.0]} {Mouse: ENSMUSG00000062590, Armc9, armadillo repeat containing 9, [RH, Score=531, Expect=8e-178]} {Smed: dd_Smed_v6_10926_0_1, dd_Smed_v6_10926_0_1, [RH, Score=499, Expect=3e-166]} {RNA1509_9388} {RNA1310_10290} {RNA815_4141} Mlig455_020592 {REF} {Length: 1875} {Pfam: HEAT repeat [PF02985.24, score=19.7]} {Human: ENSG00000135931, ARMC9, armadillo repeat containing 9, [Score=227, Expect=3e-66]} {Mouse: ENSMUSG00000062590, Armc9, armadillo repeat containing 9, [Score=225, Expect=1e-65]} {Smed: dd_Smed_v6_10926_0_1, dd_Smed_v6_10926_0_1, [Score=219, Expect=4e-64]} {RNA1509_9388} {RNA1310_10290} {RNA815_4141} |
| 13. | MligTC455_35435 | 632 | 13.16 | Mlig455_067119 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.896 Region-enriched R2: 1.234/0.03490 Regeneration-downregulated R5: -1.845 Regeneration-depleted R5: -1.845 |
0.952 | - | - | 0.952 | - | - | - | Mlig455_067119 {REF} {Length: 1795} {RNA1509_9585} {RNA1310_17157, RNA1509_9585} {RNA1509_9585, RNA815_623.1} |