TomoSeq data search

Data search

Results for MligTC455_42369

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42369

163

3.40

Mlig455_042776

Neo: -

Age: logFC(26M/2M)=-0.378

Region-enriched R3: 4.037/0.00008

Mlig455_042776 {REF} {Length: 1568} {RNA1509_42698} {RNA1310_21175.1, RNA1509_42698} {RNA1509_42698, RNA815_9526}

Cumulative graph for MligTC455_42369

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.474	2.487	0.83420	1.00000
RegionR2	2.92	2.487	0.00895	0.09414
RegionR3	4.037	2.487	0.00000	0.00008
RegionR4	-0.035	2.487	0.69964	0.98854
RegionR5	1.575	2.487	0.07581	0.25191
RegionR6	1.415	2.487	0.14921	0.68827
RegionR7	-4.746	2.487	0.99961	1.00000
RegionR8	-4.692	2.487	0.99986	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.871	2.487	0.53987	1.00000
RegenerationR2	-1.911	2.487	0.03348	0.30173
RegenerationR3	-2.279	2.487	0.00408	0.11520
RegenerationR4	-0.851	2.487	0.32497	0.76201
RegenerationR5	-1.47	2.487	0.05865	0.38582
RegenerationR6	-0.916	2.487	0.31913	0.66630
RegenerationBL	-1.552	2.487	0.99967	1.00000
RegenerationTP	3.736	2.487	0.19886	0.63923

Genes with expression patterns similar to MligTC455_42369

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42369	163	3.4	Mlig455_042776	Neo: - Age: logFC(26M/2M)=-0.378 Region-enriched R3: 4.037/0.00008		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042776 {REF} {Length: 1568} {RNA1509_42698} {RNA1310_21175.1, RNA1509_42698} {RNA1509_42698, RNA815_9526}
2.	MligTC455_09957	222	4.63	Mlig455_013085	Neo: - Age: - Region-enriched R3: 2.181/0.04013	SLC5A8	2.576	-	0.752	0.871	-	0.953	-	Mlig455_013085 {REF} {Length: 3769} {Pfam: Sodium:solute symporter family [PF00474.19, score=121.3]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=318, Expect=1e-99]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=318, Expect=1e-99]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=319, Expect=5e-100]} {Dmel: FBgn0034494, CG10444, [Score=280, Expect=1e-85]} {Celegans: WBGene00014092, ZK822.5, [Score=217, Expect=2e-62]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=257, Expect=2e-77]} {RNA1509_54739} {RNA1310_11168, RNA1509_54739} {RNA1509_54739, RNA815_11120.1}
3.	MligTC455_14972	14	0.29	Mlig455_000889	Neo: - Age: -	CALM2	1	-	-	-	1.000	-	-	Mlig455_000889 {REF} {Length: 2646} {Pfam: EF hand [PF00036.34, score=119.3]; EF-hand domain pair [PF13499.8, score=111.4]; EF-hand domain [PF13405.8, score=93.2]; EF-hand domain pair [PF13833.8, score=85.2]; EF hand [PF13202.8, score=80.4]; EF-hand domain [PF14658.8, score=42.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=31.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.1]; Caleosin related protein [PF05042.15, score=21.8]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=196, Expect=2e-64]; ENSG00000198668, CALM1, calmodulin 1, [Score=195, Expect=2e-64]; ENSG00000160014, CALM3, calmodulin 3, [Score=195, Expect=2e-64]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=198, Expect=3e-65]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=195, Expect=1e-64]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=195, Expect=1e-64]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=193, Expect=7e-64]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=192, Expect=6e-64]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=192, Expect=5e-64]} {RNA1509_16701} {RNA1310_105500, RNA1509_16701} {RNA1509_16701, RNA815_23198.1}
4.	MligTC455_41102	31	0.65	Mlig455_028559	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_028559 {REF} {Length: 643} {NoTransDecoderORF} {RNA1310_55838.1}
5.	MligTC455_38976	212	4.41	Mlig455_032433	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.449 Region-enriched R3: 3.286/0.00058 Region-enriched R5: 2.636/0.00326	KYNU	0.954	-	-	-	-	0.954	-	Mlig455_032433 {REF} {Length: 1657} {TRANSSPLICED} {Pfam: Aminotransferase class-V [PF00266.21, score=44.9]; DegT/DnrJ/EryC1/StrS aminotransferase family [PF01041.19, score=20.8]} {Human: ENSG00000115919, KYNU, kynureninase, [RH, Score=408, Expect=7e-140]} {Mouse: ENSMUSG00000026866, Kynu, kynureninase, [RH, Score=424, Expect=2e-146]} {Celegans: WBGene00015802, kynu-1, Kynureninase, [Score=429, Expect=4e-148]} {Smed: dd_Smed_v6_4299_0_1, dd_Smed_v6_4299_0_1, [Score=417, Expect=6e-144]} {RNA1509_46160} {RNA1310_12731} {RNA815_15659}
6.	MligTC455_22302	14	0.29	Mlig455_008929	Neo: - Age: -	TRPV6	0.95	-	-	-	-	0.950	-	Mlig455_008929 {REF} {Length: 3920} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.2]; Ion transport protein [PF00520.33, score=42.9]; Ankyrin repeats (many copies) [PF13857.8, score=36.7]; Ankyrin repeat [PF13606.8, score=36.3]; Ankyrin repeat [PF00023.32, score=27.5]; Ankyrin repeats (many copies) [PF13637.8, score=26.0]; Polycystin cation channel [PF08016.14, score=20.2]} {Human: ENSG00000165125, TRPV6, transient receptor potential cation channel subfamily V member 6, [Score=204, Expect=3e-54]; ENSG00000276971, TRPV6, transient receptor potential cation channel subfamily V member 6, [Score=203, Expect=7e-54]} {Mouse: ENSMUSG00000029868, Trpv6, transient receptor potential cation channel, subfamily V, member 6, [Score=204, Expect=4e-54]} {Dmel: FBgn0086693, iav, inactive, [Score=540, Expect=6e-173]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [Score=490, Expect=6e-156]} {Smed: dd_Smed_v6_28914_0_1, dd_Smed_v6_28914_0_1, [Score=493, Expect=4e-158]} {RNA1310_110441}

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