TomoSeq data search

Data search

Results for MligTC455_22302

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_22302	14	0.29	Mlig455_008929	Neo: - Age: -	TRPV6	Mlig455_008929 {REF} {Length: 3920} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.2]; Ion transport protein [PF00520.33, score=42.9]; Ankyrin repeats (many copies) [PF13857.8, score=36.7]; Ankyrin repeat [PF13606.8, score=36.3]; Ankyrin repeat [PF00023.32, score=27.5]; Ankyrin repeats (many copies) [PF13637.8, score=26.0]; Polycystin cation channel [PF08016.14, score=20.2]} {Human: ENSG00000165125, TRPV6, transient receptor potential cation channel subfamily V member 6, [Score=204, Expect=3e-54]; ENSG00000276971, TRPV6, transient receptor potential cation channel subfamily V member 6, [Score=203, Expect=7e-54]} {Mouse: ENSMUSG00000029868, Trpv6, transient receptor potential cation channel, subfamily V, member 6, [Score=204, Expect=4e-54]} {Dmel: FBgn0086693, iav, inactive, [Score=540, Expect=6e-173]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [Score=490, Expect=6e-156]} {Smed: dd_Smed_v6_28914_0_1, dd_Smed_v6_28914_0_1, [Score=493, Expect=4e-158]} {RNA1310_110441}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22302

0.29

Mlig455_008929

Neo: -

Age: -

TRPV6

Mlig455_008929 {REF} {Length: 3920} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.2]; Ion transport protein [PF00520.33, score=42.9]; Ankyrin repeats (many copies) [PF13857.8, score=36.7]; Ankyrin repeat [PF13606.8, score=36.3]; Ankyrin repeat [PF00023.32, score=27.5]; Ankyrin repeats (many copies) [PF13637.8, score=26.0]; Polycystin cation channel [PF08016.14, score=20.2]} {Human: ENSG00000165125, TRPV6, transient receptor potential cation channel subfamily V member 6, [Score=204, Expect=3e-54]; ENSG00000276971, TRPV6, transient receptor potential cation channel subfamily V member 6, [Score=203, Expect=7e-54]} {Mouse: ENSMUSG00000029868, Trpv6, transient receptor potential cation channel, subfamily V, member 6, [Score=204, Expect=4e-54]} {Dmel: FBgn0086693, iav, inactive, [Score=540, Expect=6e-173]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [Score=490, Expect=6e-156]} {Smed: dd_Smed_v6_28914_0_1, dd_Smed_v6_28914_0_1, [Score=493, Expect=4e-158]} {RNA1310_110441}

Cumulative graph for MligTC455_22302

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.318	0.619	1.00000	1.00000
RegionR2	1.843	0.619	0.99996	1.00000
RegionR3	0.125	0.619	0.99994	1.00000
RegionR4	-2.251	0.619	0.99983	1.00000
RegionR5	-0.926	0.619	0.99990	1.00000
RegionR6	-0.491	0.619	0.99994	1.00000
RegionR7	0.969	0.619	1.00000	1.00000
RegionR8	2.049	0.619	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.022	0.619	1.00000	1.00000
RegenerationR2	-1.654	0.619	0.99992	1.00000
RegenerationR3	2.071	0.619	1.00000	1.00000
RegenerationR4	1.562	0.619	1.00000	1.00000
RegenerationR5	1.346	0.619	0.99962	1.00000
RegenerationR6	1.757	0.619	1.00000	1.00000
RegenerationBL	-2.34	0.619	0.99992	1.00000
RegenerationTP	-1.569	0.619	0.99994	1.00000

Genes with expression patterns similar to MligTC455_22302

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22302	14	0.29	Mlig455_008929	Neo: - Age: -	TRPV6	1	-	-	-	-	1.000	-	Mlig455_008929 {REF} {Length: 3920} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.2]; Ion transport protein [PF00520.33, score=42.9]; Ankyrin repeats (many copies) [PF13857.8, score=36.7]; Ankyrin repeat [PF13606.8, score=36.3]; Ankyrin repeat [PF00023.32, score=27.5]; Ankyrin repeats (many copies) [PF13637.8, score=26.0]; Polycystin cation channel [PF08016.14, score=20.2]} {Human: ENSG00000165125, TRPV6, transient receptor potential cation channel subfamily V member 6, [Score=204, Expect=3e-54]; ENSG00000276971, TRPV6, transient receptor potential cation channel subfamily V member 6, [Score=203, Expect=7e-54]} {Mouse: ENSMUSG00000029868, Trpv6, transient receptor potential cation channel, subfamily V, member 6, [Score=204, Expect=4e-54]} {Dmel: FBgn0086693, iav, inactive, [Score=540, Expect=6e-173]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [Score=490, Expect=6e-156]} {Smed: dd_Smed_v6_28914_0_1, dd_Smed_v6_28914_0_1, [Score=493, Expect=4e-158]} {RNA1310_110441}
2.	MligTC455_31119	17	0.36	Mlig455_041124	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_041124 {REF} {Length: 4159} {TRANSSPLICED} {RNA1310_20292} {RNA815_18212}
3.	MligTC455_06204	24	0.51	Mlig455_045691	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_045691 {REF} {Length: 416} {NoTransDecoderORF} {RNA1310_44363} {RNA815_20199}
4.	MligTC455_42369	163	3.4	Mlig455_042776	Neo: - Age: logFC(26M/2M)=-0.378 Region-enriched R3: 4.037/0.00008		0.95	-	-	-	-	0.950	-	Mlig455_042776 {REF} {Length: 1568} {RNA1509_42698} {RNA1310_21175.1, RNA1509_42698} {RNA1509_42698, RNA815_9526}
5.	MligTC455_48678	310	6.47	Mlig455_051170	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.654 Region-enriched R4: 4.319/0.00000 Region-enriched R5: 2.245/0.02276		0.95	-	-	-	-	0.950	-	Mlig455_051170 {REF} {Length: 954} {RNA1509_15660} {RNA1310_10726.1} {RNA815_29494}