TomoSeq data search

Data search

Results for MligTC455_42431

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42431

155

3.24

Mlig455_022972

Neo: -

Age: -

Region-enriched R5: 2.041/0.00830

Mlig455_022972 {REF} {Length: 2758} {TRANSSPLICED} {Pfam: Ribosomal L32p protein family [PF01783.25, score=27.0]} {RNA1509_49961} {RNA1310_56677} {RNA815_29857}

Cumulative graph for MligTC455_42431

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.134	2.473	0.98692	1.00000
RegionR2	0.735	2.473	0.42431	0.81487
RegionR3	1.769	2.473	0.01159	0.16906
RegionR4	0.97	2.473	0.20486	0.48640
RegionR5	2.041	2.473	0.00077	0.00830
RegionR6	1.855	2.473	0.00998	0.16792
RegionR7	-0.094	2.473	0.84107	1.00000
RegionR8	-6.143	2.473	0.01885	0.26711

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.681	2.473	0.41718	1.00000
RegenerationR2	-0.273	2.473	0.67866	0.94856
RegenerationR3	-1.148	2.473	0.07094	0.44613
RegenerationR4	-0.009	2.473	0.99545	1.00000
RegenerationR5	-0.781	2.473	0.12735	0.53166
RegenerationR6	-0.989	2.473	0.14258	0.46263
RegenerationBL	0.284	2.473	0.75012	1.00000
RegenerationTP	3.953	2.473	0.01744	0.22618

Genes with expression patterns similar to MligTC455_42431

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42431	155	3.24	Mlig455_022972	Neo: - Age: - Region-enriched R5: 2.041/0.00830		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022972 {REF} {Length: 2758} {TRANSSPLICED} {Pfam: Ribosomal L32p protein family [PF01783.25, score=27.0]} {RNA1509_49961} {RNA1310_56677} {RNA815_29857}
2.	MligTC455_29996	290	6.04	Mlig455_042554	Neo: - Age: logFC(26M/2M)=-0.341	FGA	1.78	-	-	-	0.807	-	0.973	Mlig455_042554 {REF} {Length: 2686} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=116.8]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=99.8, Expect=4e-21]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=95.5, Expect=3e-20]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=95.5, Expect=5e-22]} {Mouse: ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=97.8, Expect=1e-20]; ENSMUSG00000033860, Fgg, fibrinogen gamma chain, [Score=96.7, Expect=8e-21]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=95.5, Expect=3e-20]} {Dmel: FBgn0051832, CG31832, [Score=86.3, Expect=9e-19]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=107, Expect=4e-24]} {RNA1509_42640} {RNA1310_14812, RNA1509_42640} {RNA1509_42640, RNA815_6799.1}
3.	MligTC455_36323	204	4.24	Mlig455_013277	Neo: - Age: logFC(26M/2M)=0.456	TMC5	1.731	-	-	-	-	0.770	0.961	Mlig455_013277 {REF} {Length: 3130} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=52.5]} {Human: ENSG00000103534, TMC5, transmembrane channel like 5, [Score=112, Expect=4e-25]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=96.7, Expect=3e-20]; ENSMUSG00000030650, Tmc5, transmembrane channel-like gene family 5, [Score=95.5, Expect=7e-20]} {RNA1509_58030} {RNA1310_8396} {RNA815_832.1}
4.	MligTC455_43577	1202	25.05	Mlig455_021499, Mlig455_067383	Neo: - Age: Down-Down-Up	AL031281.2	1.674	-	-	-	0.961	0.713	-	Mlig455_021499 {REF} {Length: 1203} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=66.1]; ADP-ribosylation factor family [PF00025.23, score=27.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=335, Expect=2e-118]; ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=335, Expect=2e-118]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=335, Expect=1e-118]} {Dmel: FBgn0010341, Cdc42, [RH, Score=337, Expect=2e-119]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=326, Expect=2e-115]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=325, Expect=6e-115]} {RNA1509_43878, RNA1509_4460} {RNA1310_22711, RNA1509_43878} {RNA1509_43878, RNA815_7681.2} Mlig455_067383 {REF} {Length: 1218} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=66.1]; ADP-ribosylation factor family [PF00025.23, score=27.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=335, Expect=2e-118]; ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=335, Expect=2e-118]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=335, Expect=1e-118]} {Dmel: FBgn0010341, Cdc42, [RH, Score=337, Expect=2e-119]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=326, Expect=2e-115]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=325, Expect=6e-115]} {RNA1509_4460} {RNA1310_22711} {RNA815_7681.2}
5.	MligTC455_38237	81	1.69	Mlig455_034923, Mlig455_037360, Mlig455_070135, Mlig455_070138, Mlig455_070426	Neo: - Age: -		1.673	-	-	-	0.972	0.701	-	Mlig455_034923 {REF} {Length: 308} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_25455} {RNA815_14978} Mlig455_037360 {REF} {Length: 1049} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978} Mlig455_070135 {REF} {Length: 356} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978} Mlig455_070138 {REF} {Length: 384} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978} Mlig455_070426 {REF} {Length: 293} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978}
6.	MligTC455_17173	46	0.96	Mlig455_059401	Neo: - Age: Up-Down-Up Region-enriched R4: 6.142/0.00000		0.957	-	-	-	0.957	-	-	Mlig455_059401 {REF} {Length: 798} {RNA1310_42556} {RNA815_63393}
7.	MligTC455_16171	51	1.07	Mlig455_001659, Mlig455_050105	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_001659 {REF} {Length: 762} Mlig455_050105 {REF} {Length: 859}
8.	MligTC455_32629	521	10.85	Mlig455_009122, Mlig455_011103, Mlig455_058072	Neo: - Age: -	NDUFAF1	0.955	-	-	-	0.955	-	-	Mlig455_009122 {REF} {Length: 2161} {Pfam: Complex I intermediate-associated protein 30 (CIA30) [PF08547.14, score=77.9]} {Human: ENSG00000137806, NDUFAF1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=103, Expect=6e-25]} {Mouse: ENSMUSG00000027305, Ndufaf1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=97.1, Expect=1e-22]} {Dmel: FBgn0039689, CIA30, Complex I intermediate-associated protein, 30 kDa, [RH, Score=132, Expect=3e-36]} {Celegans: WBGene00008225, nuaf-1, Probable complex I intermediate-associated protein 30, mitochondrial, [RH, Score=123, Expect=1e-32]} {Smed: dd_Smed_v6_8887_0_1, dd_Smed_v6_8887_0_1, [RH, Score=140, Expect=1e-39]} {RNA1509_22274} {RNA1310_27131} {RNA815_11850} Mlig455_011103 {REF} {Length: 1678} {TRANSSPLICED} {Pfam: Complex I intermediate-associated protein 30 (CIA30) [PF08547.14, score=77.2]} {Human: ENSG00000137806, NDUFAF1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=103, Expect=2e-24]} {Mouse: ENSMUSG00000027305, Ndufaf1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=96.3, Expect=3e-22]} {Dmel: FBgn0039689, CIA30, Complex I intermediate-associated protein, 30 kDa, [RH, Score=133, Expect=4e-36]} {Celegans: WBGene00008225, nuaf-1, Probable complex I intermediate-associated protein 30, mitochondrial, [RH, Score=123, Expect=3e-32]} {Smed: dd_Smed_v6_8887_0_1, dd_Smed_v6_8887_0_1, [RH, Score=140, Expect=5e-39]} {RNA1509_22274} {RNA1310_27131} {RNA815_11850} Mlig455_058072 {REF} {Length: 1678} {TRANSSPLICED} {Pfam: Complex I intermediate-associated protein 30 (CIA30) [PF08547.14, score=77.2]} {Human: ENSG00000137806, NDUFAF1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=103, Expect=2e-24]} {Mouse: ENSMUSG00000027305, Ndufaf1, NADH:ubiquinone oxidoreductase complex assembly factor 1, [RH, Score=96.3, Expect=3e-22]} {Dmel: FBgn0039689, CIA30, Complex I intermediate-associated protein, 30 kDa, [RH, Score=133, Expect=4e-36]} {Celegans: WBGene00008225, nuaf-1, Probable complex I intermediate-associated protein 30, mitochondrial, [RH, Score=123, Expect=3e-32]} {Smed: dd_Smed_v6_8887_0_1, dd_Smed_v6_8887_0_1, [RH, Score=140, Expect=5e-39]} {RNA1509_22274, RNA1509_36771} {RNA1310_27131, RNA1509_36771} {RNA1509_36771, RNA815_11850}
9.	MligTC455_10750	444	9.25	Mlig455_006346, Mlig455_006396	Neo: - Age: logFC(26M/2M)=1.295 Region-enriched R4: 2.273/0.00787 Region-enriched R5: 1.707/0.01374		0.953	-	-	-	0.953	-	-	Mlig455_006346 {REF} {Length: 762} {RNA1509_56607} {RNA1310_53537.1} {RNA815_22579} Mlig455_006396 {REF} {Length: 805} {RNA1509_56607} {RNA1310_53537.1} {RNA815_22579}
10.	MligTC455_00713	15	0.3	Mlig455_024702	Neo: - Age: - Region-enriched R4: 3.868/0.02264		0.952	-	-	-	0.952	-	-	Mlig455_024702 {REF} {Length: 892} {RNA1509_42092} {RNA1310_32310.1}
11.	MligTC455_25292	1585	33.02	Mlig455_064668, Mlig455_064671	Neo: - Age: logFC(26M/2M)=1.253 Region-enriched R4: 3.729/0.01618	TNN	0.952	-	-	-	0.952	-	-	Mlig455_064668 {REF} {Length: 1729} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=130.0]} {Human: ENSG00000120332, TNN, tenascin N, [Score=124, Expect=4e-30]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=129, Expect=4e-32]} {Dmel: FBgn0051832, CG31832, [Score=107, Expect=5e-27]} {Celegans: WBGene00020516, T15B7.1, [Score=63.2, Expect=7e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=83.2, Expect=3e-17]} {RNA1509_41657} {RNA1310_23136, RNA1509_41657} {RNA1509_41657, RNA815_8988.1} Mlig455_064671 {REF} {Length: 2145} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=129.7]} {Human: ENSG00000120332, TNN, tenascin N, [Score=123, Expect=6e-30]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=128, Expect=7e-32]} {Dmel: FBgn0051832, CG31832, [Score=108, Expect=3e-27]} {Celegans: WBGene00020516, T15B7.1, [Score=66.6, Expect=6e-12]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=84.3, Expect=1e-17]} {RNA1509_41657, RNA1509_54212} {RNA1310_23136, RNA1509_54212} {RNA1509_54212, RNA815_8988.1}
12.	MligTC455_18421	221	4.61	Mlig455_051563	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.356	GGPS1	0.951	-	-	-	0.951	-	-	Mlig455_051563 {REF} {Length: 1568} {TRANSSPLICED} {Pfam: Polyprenyl synthetase [PF00348.19, score=214.9]} {Human: ENSG00000152904, GGPS1, geranylgeranyl diphosphate synthase 1, [RH, Score=312, Expect=5e-106]} {Mouse: ENSMUSG00000021302, Ggps1, geranylgeranyl diphosphate synthase 1, [RH, Score=316, Expect=9e-108]} {Dmel: FBgn0019662, qm, quemao, [RH, Score=276, Expect=1e-91]} {Celegans: WBGene00000761, coq-1, COenzyme Q (Ubiquinone) biosynthesis, [Score=61.6, Expect=1e-10]} {Smed: dd_Smed_v6_7235_0_2, dd_Smed_v6_7235_0_2, [RH, Score=300, Expect=2e-101]} {RNA1509_28048, RNA1509_33893} {RNA1310_30605, RNA1509_33893} {RNA1509_33893, RNA815_14345}
13.	MligTC455_36793	457	9.52	Mlig455_006203, Mlig455_059291, Mlig455_065204	Neo: Germline Age: - Region-specific R4: 5.200 Region-enriched R4: 3.376/0.02142	PRR9	0.951	-	-	-	0.951	-	-	Mlig455_006203 {REF} {Length: 1777} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.9]; Integrase core domain [PF00665.28, score=36.9]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=67.4, Expect=1e-11]} {RNA1509_57967} {RNA1310_55181.1} {RNA815_36039} Mlig455_059291 {REF} {Length: 545} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.9]; Integrase core domain [PF00665.28, score=36.9]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=67.4, Expect=1e-11]} {RNA1509_57967} {RNA1310_55181.1} {RNA815_36039} Mlig455_065204 {REF} {Length: 2877} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.4, Expect=3e-06]} {RNA1509_57967} {RNA1310_45832, RNA1509_57967} {RNA1509_57967, RNA815_34745}

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