Data search
Results for MligTC455_42450
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42450 | 191 | 3.98 | Mlig455_044139 | Neo: - Age: logFC(26M/2M)=0.453 |
MRAS | Mlig455_044139 {REF} {Length: 2133} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=343.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=136.1]; ADP-ribosylation factor family [PF00025.23, score=68.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=67.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=31.1]; RsgA GTPase [PF03193.18, score=27.3]; Septin [PF00735.20, score=23.8]; NB-ARC domain [PF00931.24, score=23.3]; AAA ATPase domain [PF13191.8, score=21.1]; Conserved hypothetical ATP binding protein [PF03029.19, score=19.7]; NUBPL iron-transfer P-loop NTPase [PF10609.11, score=18.8]} {Human: ENSG00000158186, MRAS, muscle RAS oncogene homolog, [RH, Score=237, Expect=1e-76]} {Mouse: ENSMUSG00000032470, Mras, muscle and microspikes RAS, [RH, Score=237, Expect=1e-76]} {Dmel: FBgn0003206, Ras64B, Ras oncogene at 64B, [Score=174, Expect=8e-53]} {Celegans: WBGene00004311, ras-2, GTP binding protein; R-RAS related, [RH, Score=240, Expect=3e-78]} {Smed: dd_Smed_v6_8100_0_2, dd_Smed_v6_8100_0_2, [RH, Score=209, Expect=7e-66]} {RNA1509_34936} {RNA1310_19797} {RNA815_1221.1} |
Cumulative graph for MligTC455_42450
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.957 | 2.64 | 0.14821 | 0.76192 | |
| RegionR2 | 0.44 | 2.64 | 0.65178 | 0.98639 | |
| RegionR3 | 0.851 | 2.64 | 0.32992 | 0.86790 | |
| RegionR4 | 0.73 | 2.64 | 0.46228 | 0.78992 | |
| RegionR5 | 1.209 | 2.64 | 0.10787 | 0.32116 | |
| RegionR6 | 0.858 | 2.64 | 0.33689 | 0.92425 | |
| RegionR7 | 1.073 | 2.64 | 0.27592 | 0.90690 | |
| RegionR8 | 0.796 | 2.64 | 0.49385 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.121 | 2.64 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.25 | 2.64 | 0.64175 | 0.93203 | |
| RegenerationR3 | -0.936 | 2.64 | 0.13075 | 0.55402 | |
| RegenerationR4 | -0.461 | 2.64 | 0.47631 | 0.85666 | |
| RegenerationR5 | -0.229 | 2.64 | 0.66791 | 0.93987 | |
| RegenerationR6 | -0.659 | 2.64 | 0.30207 | 0.65158 | |
| RegenerationBL | -1.344 | 2.64 | 0.12859 | 0.42676 | |
| RegenerationTP | -1.299 | 2.64 | 0.15135 | 0.57605 |
Genes with expression patterns similar to MligTC455_42450
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42450 | 191 | 3.98 | Mlig455_044139 | Neo: - Age: logFC(26M/2M)=0.453 |
MRAS | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044139 {REF} {Length: 2133} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=343.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=136.1]; ADP-ribosylation factor family [PF00025.23, score=68.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=67.4]; 50S ribosome-binding GTPase [PF01926.25, score=41.3]; Gtr1/RagA G protein conserved region [PF04670.14, score=31.1]; RsgA GTPase [PF03193.18, score=27.3]; Septin [PF00735.20, score=23.8]; NB-ARC domain [PF00931.24, score=23.3]; AAA ATPase domain [PF13191.8, score=21.1]; Conserved hypothetical ATP binding protein [PF03029.19, score=19.7]; NUBPL iron-transfer P-loop NTPase [PF10609.11, score=18.8]} {Human: ENSG00000158186, MRAS, muscle RAS oncogene homolog, [RH, Score=237, Expect=1e-76]} {Mouse: ENSMUSG00000032470, Mras, muscle and microspikes RAS, [RH, Score=237, Expect=1e-76]} {Dmel: FBgn0003206, Ras64B, Ras oncogene at 64B, [Score=174, Expect=8e-53]} {Celegans: WBGene00004311, ras-2, GTP binding protein; R-RAS related, [RH, Score=240, Expect=3e-78]} {Smed: dd_Smed_v6_8100_0_2, dd_Smed_v6_8100_0_2, [RH, Score=209, Expect=7e-66]} {RNA1509_34936} {RNA1310_19797} {RNA815_1221.1} |
| 2. | MligTC455_31550 | 339 | 7.07 | Mlig455_057441 | Neo: - Age: - |
RBM10 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_057441 {REF} {Length: 3693} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.9]; OCRE domain [PF17780.3, score=47.3]; G-patch domain [PF01585.25, score=44.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.3]} {Human: ENSG00000182872, RBM10, RNA binding motif protein 10, [RH, Score=328, Expect=1e-96]} {Mouse: ENSMUSG00000031060, Rbm10, RNA binding motif protein 10, [RH, Score=330, Expect=7e-98]} {Dmel: FBgn0031319, CG4896, [RH, Score=296, Expect=7e-86]} {Celegans: WBGene00020346, rbm-5, RNA Binding Motif protein homolog, [RH, Score=115, Expect=6e-26]} {Smed: dd_Smed_v6_2392_0_4, dd_Smed_v6_2392_0_4, [RH, Score=208, Expect=8e-56]} {RNA1509_10003} {RNA1310_1240.1} {RNA815_5113} |
| 3. | MligTC455_32493 | 777 | 16.2 | Mlig455_022632 | Neo: - Age: - Region-enriched R5: 1.296/0.01419 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_022632 {REF} {Length: 224} {NoTransDecoderORF} {RNA1509_16305} {RNA1310_27778.1} {RNA815_7035} | |
| 4. | MligTC455_20065 | 1482 | 30.87 | Mlig455_000221, Mlig455_058479 | Neo: - Age: Down-Up-Up |
PIGW | 0.961 | - | - | - | - | 0.961 | - | Mlig455_000221 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: GWT1 [PF06423.14, score=72.6]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=100, Expect=1e-21]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=115, Expect=4e-27]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=106, Expect=5e-24]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=120, Expect=6e-29]} {RNA1509_19464, RNA1509_29630} {RNA1310_6153, RNA1509_19464, RNA1509_29630} {RNA1509_19464, RNA1509_29630, RNA815_7740} Mlig455_058479 {REF} {Length: 2310} {Pfam: GWT1 [PF06423.14, score=70.1]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=113, Expect=2e-26]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=102, Expect=6e-23]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=119, Expect=1e-28]} {RNA1509_19464} {RNA1310_6153} {RNA815_7740} |
| 5. | MligTC455_30708 | 801 | 16.68 | Mlig455_029611 | Neo: Germline Age: - |
ALDH18A1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_029611 {REF} {Length: 2935} {TRANSSPLICED} {Pfam: Amino acid kinase family [PF00696.30, score=136.1]; Aldehyde dehydrogenase family [PF00171.24, score=55.9]} {Human: ENSG00000059573, ALDH18A1, aldehyde dehydrogenase 18 family member A1, [RH, Score=845, Expect=0.0]} {Mouse: ENSMUSG00000025007, Aldh18a1, aldehyde dehydrogenase 18 family, member A1, [RH, Score=858, Expect=0.0]} {Dmel: FBgn0037146, CG7470, [RH, Score=809, Expect=0.0]} {Celegans: WBGene00011938, alh-13, Probable delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase, [RH, Score=810, Expect=0.0]} {Smed: dd_Smed_v6_1060_0_1, dd_Smed_v6_1060_0_1, [RH, Score=908, Expect=0.0]} {RNA1509_1671} {RNA1310_2413} {RNA815_1917} |
| 6. | MligTC455_28935 | 350 | 7.3 | Mlig455_001893 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.374 |
0.959 | - | - | - | - | 0.959 | - | Mlig455_001893 {REF} {Length: 1894} {Pfam: Universal stress protein family [PF00582.28, score=78.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=112, Expect=2e-32]} {RNA1509_16808, RNA1509_2764, RNA1509_31626} {RNA1310_13748, RNA1509_16808, RNA1509_31626} {RNA1509_16808, RNA1509_31626, RNA815_17818.1} | |
| 7. | MligTC455_18654 | 497 | 10.36 | Mlig455_032693 | Neo: - Age: - |
PPME1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_032693 {REF} {Length: 2557} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase family [PF12697.9, score=84.1]; alpha/beta hydrolase fold [PF00561.22, score=34.3]; Serine aminopeptidase, S33 [PF12146.10, score=30.6]; alpha/beta hydrolase fold [PF07859.15, score=20.5]; PGAP1-like protein [PF07819.15, score=19.9]} {Human: ENSG00000214517, PPME1, protein phosphatase methylesterase 1, [RH, Score=273, Expect=6e-87]} {Mouse: ENSMUSG00000030718, Ppme1, protein phosphatase methylesterase 1, [RH, Score=157, Expect=3e-43]} {Dmel: FBgn0035951, CG5068, [RH, Score=262, Expect=6e-83]} {Celegans: WBGene00007188, B0464.9, Probable protein phosphatase methylesterase 1, [RH, Score=147, Expect=4e-40]} {Smed: dd_Smed_v6_5813_0_1, dd_Smed_v6_5813_0_1, [RH, Score=291, Expect=1e-94]} {RNA1509_18678, RNA1509_50525} {RNA1310_14476, RNA1509_50525} {RNA1509_50525, RNA815_3742.1} |
| 8. | MligTC455_46238 | 222 | 4.62 | Mlig455_040297 | Neo: - Age: - |
DNM1L | 0.952 | - | - | - | - | 0.952 | - | Mlig455_040297 {REF} {Length: 2254} {Pfam: Dynamin central region [PF01031.22, score=329.6]; Dynamin family [PF00350.25, score=174.2]; Dynamin GTPase effector domain [PF02212.20, score=107.0]} {Human: ENSG00000087470, DNM1L, dynamin 1 like, [Score=873, Expect=0.0]} {Mouse: ENSMUSG00000022789, Dnm1l, dynamin 1-like, [Score=867, Expect=0.0]} {Dmel: FBgn0026479, Drp1, Dynamin related protein 1, [Score=853, Expect=0.0]} {Celegans: WBGene00001093, drp-1, Dynamin-Related Protein; Dynamin-related protein, [Score=789, Expect=0.0]} {Smed: dd_Smed_v6_1818_0_1, dd_Smed_v6_1818_0_1, [Score=654, Expect=0.0]} {RNA1509_49692} {RNA1310_7022} {RNA815_5974} |
| 9. | MligTC455_18272 | 1198 | 24.97 | Mlig455_027206, Mlig455_050662 | Neo: - Age: - |
CUL5 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_027206 {REF} {Length: 4677} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.7]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1004, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1, RNA1509_7097} {RNA1509_7097, RNA815_1237.1} Mlig455_050662 {REF} {Length: 3918} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=599.2]; Cullin protein neddylation domain [PF10557.11, score=65.1]} {Human: ENSG00000166266, CUL5, cullin 5, [RH, Score=1003, Expect=0.0]} {Mouse: ENSMUSG00000032030, Cul5, cullin 5, [RH, Score=998, Expect=0.0]} {Dmel: FBgn0039632, Cul5, Cullin 5, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00000840, cul-5, Cullin-5, [RH, Score=706, Expect=0.0]} {Smed: dd_Smed_v6_8238_0_1, dd_Smed_v6_8238_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_7097} {RNA1310_5798.1} {RNA815_1237.1} |
Berezikov Lab - 2020-2021 © ERIBA