Data search
Results for MligTC455_42460
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42460 | 502 | 10.47 | Mlig455_056167 | Neo: - Age: - |
GAPVD1 | Mlig455_056167 {REF} {Length: 4996} {TRANSSPLICED} {Pfam: Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=58.8]; GTPase-activator protein for Ras-like GTPase [PF00616.21, score=28.7]} {Human: ENSG00000165219, GAPVD1, GTPase activating protein and VPS9 domains 1, [RH, Score=199, Expect=8e-51]} {Mouse: ENSMUSG00000026867, Gapvd1, GTPase activating protein and VPS9 domains 1, [RH, Score=196, Expect=3e-50]} {Dmel: FBgn0030286, CG1657, [RH, Score=140, Expect=4e-33]} {Celegans: WBGene00004377, rme-6, Receptor-mediated endocytosis protein 6, [RH, Score=119, Expect=7e-27]} {Smed: dd_Smed_v6_6601_0_1, dd_Smed_v6_6601_0_1, [RH, Score=160, Expect=2e-39]} {RNA1509_19599, RNA1509_33439, RNA1509_7178} {RNA1310_1202.1, RNA1509_19599, RNA1509_33439, RNA1509_7178} {RNA1509_19599, RNA1509_33439, RNA1509_7178, RNA815_477.1} |
Cumulative graph for MligTC455_42460
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.48 | 3.833 | 0.68063 | 1.00000 | |
| RegionR2 | 0.908 | 3.833 | 0.06779 | 0.31631 | |
| RegionR3 | 0.022 | 3.833 | 0.95553 | 1.00000 | |
| RegionR4 | -0.086 | 3.833 | 0.84913 | 1.00000 | |
| RegionR5 | 0.291 | 3.833 | 0.39809 | 0.75463 | |
| RegionR6 | 0.262 | 3.833 | 0.52041 | 1.00000 | |
| RegionR7 | 0.157 | 3.833 | 0.78939 | 1.00000 | |
| RegionR8 | -1.074 | 3.833 | 0.25093 | 0.87019 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.199 | 3.833 | 0.18518 | 0.92596 | |
| RegenerationR2 | -0.147 | 3.833 | 0.68759 | 0.95191 | |
| RegenerationR3 | 0.516 | 3.833 | 0.22371 | 0.65905 | |
| RegenerationR4 | 0.334 | 3.833 | 0.41155 | 0.82151 | |
| RegenerationR5 | 0.601 | 3.833 | 0.09028 | 0.46197 | |
| RegenerationR6 | 0.445 | 3.833 | 0.28696 | 0.63702 | |
| RegenerationBL | 1.4 | 3.833 | 0.01120 | 0.10775 | |
| RegenerationTP | 0.634 | 3.833 | 0.37966 | 0.81488 |
Genes with expression patterns similar to MligTC455_42460
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42460 | 502 | 10.47 | Mlig455_056167 | Neo: - Age: - |
GAPVD1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056167 {REF} {Length: 4996} {TRANSSPLICED} {Pfam: Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=58.8]; GTPase-activator protein for Ras-like GTPase [PF00616.21, score=28.7]} {Human: ENSG00000165219, GAPVD1, GTPase activating protein and VPS9 domains 1, [RH, Score=199, Expect=8e-51]} {Mouse: ENSMUSG00000026867, Gapvd1, GTPase activating protein and VPS9 domains 1, [RH, Score=196, Expect=3e-50]} {Dmel: FBgn0030286, CG1657, [RH, Score=140, Expect=4e-33]} {Celegans: WBGene00004377, rme-6, Receptor-mediated endocytosis protein 6, [RH, Score=119, Expect=7e-27]} {Smed: dd_Smed_v6_6601_0_1, dd_Smed_v6_6601_0_1, [RH, Score=160, Expect=2e-39]} {RNA1509_19599, RNA1509_33439, RNA1509_7178} {RNA1310_1202.1, RNA1509_19599, RNA1509_33439, RNA1509_7178} {RNA1509_19599, RNA1509_33439, RNA1509_7178, RNA815_477.1} |
| 2. | MligTC455_38540 | 303 | 6.32 | Mlig455_060217 | Neo: - Age: - Region-enriched R5: 2.468/0.00715 |
2.473 | - | - | - | 0.793 | 0.729 | 0.951 | Mlig455_060217 {REF} {Length: 1501} {TRANSSPLICED} {Pfam: PQ loop repeat [PF04193.16, score=53.7]} {RNA1509_22974} {RNA1310_35264} {RNA815_10669} | |
| 3. | MligTC455_18750 | 1324 | 27.58 | Mlig455_001646 | Neo: - Age: - |
WASF2 | 1.771 | - | - | - | 0.954 | 0.817 | - | Mlig455_001646 {REF} {Length: 3917} {TRANSSPLICED} {Pfam: WH2 motif [PF02205.22, score=21.1]} {Human: ENSG00000158195, WASF2, WAS protein family member 2, [RH, Score=132, Expect=1e-32]} {Mouse: ENSMUSG00000028868, Wasf2, WAS protein family, member 2, [RH, Score=122, Expect=3e-29]} {Dmel: FBgn0041781, SCAR, [RH, Score=109, Expect=1e-24]} {Smed: dd_Smed_v6_3189_0_1, dd_Smed_v6_3189_0_1, [RH, Score=113, Expect=1e-26]} {RNA1509_28838, RNA1509_57063} {RNA1310_21692.1, RNA1509_28838, RNA1509_57063} {RNA1509_28838, RNA1509_57063, RNA815_12255} |
| 4. | MligTC455_18701 | 462 | 9.62 | Mlig455_002151 | Neo: - Age: - |
RPS7 | 1.722 | 0.966 | - | - | 0.756 | - | - | Mlig455_002151 {REF} {Length: 4747} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=189.9]; Major intrinsic protein [PF00230.22, score=18.7]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [Score=198, Expect=2e-60]} {Mouse: ENSMUSG00000061477, Rps7, ribosomal protein S7, [Score=198, Expect=2e-60]; ENSMUSG00000044424, Gm9493, predicted gene 9493, [Score=198, Expect=2e-60]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [Score=177, Expect=1e-52]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [Score=165, Expect=3e-48]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [Score=156, Expect=6e-45]} {RNA1509_51916, RNA1509_53833} {RNA1310_2260.1, RNA1509_53833} {RNA1509_53833, RNA815_12689} |
| 5. | MligTC455_19190 | 478 | 9.96 | Mlig455_026448 | Neo: - Age: - |
DGCR6L | 1.712 | - | 0.751 | - | - | - | 0.961 | Mlig455_026448 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: DiGeorge syndrome critical region 6 (DGCR6) protein [PF07324.13, score=181.5]; Protein of unknown function (DUF2458) [PF10454.11, score=22.6]} {Human: ENSG00000128185, DGCR6L, DiGeorge syndrome critical region gene 6 like, [RH, Score=100, Expect=1e-25]; ENSG00000278817, AC007325.4, protein DGCR6, [RH, Score=98.6, Expect=5e-25]; ENSG00000183628, DGCR6, DiGeorge syndrome critical region gene 6, [RH, Score=98.6, Expect=5e-25]} {Mouse: ENSMUSG00000111647, Dgcr6, DiGeorge syndrome critical region gene 6, [RH, Score=99.8, Expect=8e-26]; ENSMUSG00000003531, Dgcr6, DiGeorge syndrome critical region gene 6, [RH, Score=99.8, Expect=8e-26]} {Dmel: FBgn0001099, gdl, gonadal, [RH, Score=122, Expect=5e-35]} {Smed: dd_Smed_v6_6214_0_1, dd_Smed_v6_6214_0_1, [RH, Score=112, Expect=4e-31]} {RNA1509_18355} {RNA1310_28938} {RNA815_13630} |
| 6. | MligTC455_20929 | 1082 | 22.55 | Mlig455_028886 | Neo: - Age: - Region-enriched R5: 1.765/0.00000 |
EIF4E | 1.692 | - | - | - | - | 0.956 | 0.736 | Mlig455_028886 {REF} {Length: 2120} {TRANSSPLICED} {Pfam: Eukaryotic initiation factor 4E [PF01652.20, score=186.9]} {Human: ENSG00000151247, EIF4E, eukaryotic translation initiation factor 4E, [RH, Score=231, Expect=4e-76]; ENSG00000175766, EIF4E1B, eukaryotic translation initiation factor 4E family member 1B, [RH, Score=220, Expect=3e-72]} {Mouse: ENSMUSG00000028156, Eif4e, eukaryotic translation initiation factor 4E, [RH, Score=233, Expect=1e-77]} {Dmel: FBgn0015218, eIF4E1, eukaryotic translation initiation factor 4E1, [RH, Score=211, Expect=1e-68]} {Celegans: WBGene00002061, ife-3, Eukaryotic translation initiation factor 4E-3, [RH, Score=210, Expect=1e-68]} {Smed: dd_Smed_v6_2919_0_1, dd_Smed_v6_2919_0_1, [RH, Score=215, Expect=7e-71]} {RNA1509_13723, RNA1509_36819, RNA1509_42398, RNA1509_43811, RNA1509_47581} {RNA1310_26899, RNA1509_13723, RNA1509_36819, RNA1509_42398, RNA1509_43811, RNA1509_47581} {RNA1509_13723, RNA1509_36819, RNA1509_42398, RNA1509_43811, RNA1509_47581, RNA815_11129} |
| 7. | MligTC455_31587 | 246 | 5.12 | Mlig455_061296 | Neo: Irradiation Age: - Region-enriched R5: 2.189/0.00183 |
1.658 | - | - | - | 0.956 | 0.702 | - | Mlig455_061296 {REF} {Length: 3275} {TRANSSPLICED} {RNA1509_28161} {RNA1310_8643, RNA1509_28161} {RNA1509_28161, RNA815_2213} | |
| 8. | MligTC455_18813 | 571 | 11.9 | Mlig455_065129 | Neo: - Age: - |
HACD2 | 0.976 | - | - | - | - | 0.976 | - | Mlig455_065129 {REF} {Length: 1405} {TRANSSPLICED} {Pfam: Protein tyrosine phosphatase-like protein, PTPLA [PF04387.16, score=198.0]} {Human: ENSG00000206527, HACD2, 3-hydroxyacyl-CoA dehydratase 2, [RH, Score=197, Expect=6e-63]} {Mouse: ENSMUSG00000035376, Hacd2, 3-hydroxyacyl-CoA dehydratase 2, [RH, Score=199, Expect=6e-64]} {Dmel: FBgn0032394, CG6746, [RH, Score=146, Expect=3e-43]} {Celegans: WBGene00020517, hpo-8, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase hpo-8, [RH, Score=178, Expect=2e-56]} {Smed: dd_Smed_v6_1743_0_1, dd_Smed_v6_1743_0_1, [RH, Score=157, Expect=3e-48]} {RNA1509_8698} {RNA1310_23405.1, RNA1509_8698} {RNA1509_8698, RNA815_24657} |
| 9. | MligTC455_48983 | 364 | 7.59 | Mlig455_006479 | Neo: - Age: - |
HEXB | 0.967 | - | - | - | - | - | 0.967 | Mlig455_006479 {REF} {Length: 4395} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 20, catalytic domain [PF00728.24, score=279.9]; beta-acetyl hexosaminidase like [PF14845.8, score=64.9]; Glycosyl hydrolase family 20, domain 2 [PF02838.17, score=25.4]} {Human: ENSG00000049860, HEXB, hexosaminidase subunit beta, [Score=404, Expect=3e-131]; ENSG00000213614, HEXA, hexosaminidase subunit alpha, [Score=392, Expect=6e-127]} {Mouse: ENSMUSG00000021665, Hexb, hexosaminidase B, [Score=397, Expect=5e-129]; ENSMUSG00000025232, Hexa, hexosaminidase A, [Score=393, Expect=1e-127]} {Dmel: FBgn0045063, fdl, fused lobes, [RH, Score=214, Expect=4e-59]} {Celegans: WBGene00020509, hex-1, Beta-hexosaminidase A, [Score=313, Expect=1e-96]} {Smed: dd_Smed_v6_3964_0_1, dd_Smed_v6_3964_0_1, [RH, Score=477, Expect=1e-156]} {RNA1509_11107} {RNA1310_1997.1} {RNA815_5636} |
| 10. | MligTC455_41238 | 268 | 5.58 | Mlig455_014819 | Neo: - Age: - |
NDOR1 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_014819 {REF} {Length: 5603} {Pfam: Flavodoxin [PF00258.27, score=66.4]; FAD binding domain [PF00667.22, score=60.7]; Oxidoreductase NAD-binding domain [PF00175.23, score=43.6]} {Human: ENSG00000188566, NDOR1, NADPH dependent diflavin oxidoreductase 1, [RH, Score=361, Expect=3e-115]} {Mouse: ENSMUSG00000006471, Ndor1, NADPH dependent diflavin oxidoreductase 1, [RH, Score=363, Expect=2e-116]} {Dmel: FBgn0035890, CG13667, [RH, Score=295, Expect=1e-90]} {Celegans: WBGene00001485, fre-1, NADPH-dependent diflavin oxidoreductase 1, [RH, Score=300, Expect=7e-93]} {Smed: dd_Smed_v6_17265_0_1, dd_Smed_v6_17265_0_1, [RH, Score=339, Expect=1e-107]} {RNA1509_17019, RNA1509_19226} {RNA1310_9966, RNA1509_17019} {RNA1509_17019, RNA815_3436} |
| 11. | MligTC455_32879 | 1160 | 24.16 | Mlig455_055296, Mlig455_055340 | Neo: Int S/G2/M Age: - |
C17orf49 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_055296 {REF} {Length: 1474} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=24.5]} {Human: ENSG00000258315, C17orf49, chromosome 17 open reading frame 49, [Score=66.6, Expect=4e-13]} {Mouse: ENSMUSG00000020831, 0610010K14Rik, RIKEN cDNA 0610010K14 gene, [Score=64.7, Expect=1e-12]} {RNA1509_33009} {RNA1310_21976} {RNA815_11277} Mlig455_055340 {REF} {Length: 1488} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=24.5]} {Human: ENSG00000258315, C17orf49, chromosome 17 open reading frame 49, [Score=66.2, Expect=1e-12]} {Mouse: ENSMUSG00000020831, 0610010K14Rik, RIKEN cDNA 0610010K14 gene, [Score=63.2, Expect=5e-12]} {RNA1509_33009} {RNA1310_21976, RNA1509_33009} {RNA1509_33009, RNA815_11277} |
| 12. | MligTC455_39267 | 863 | 17.98 | Mlig455_034556, Mlig455_041487 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.003/0.01804 Regeneration-upregulated R6: 1.720 Regeneration-enriched R6: 1.720 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_034556 {REF} {Length: 2555} {TRANSSPLICED} {Pfam: PPR repeat family [PF13041.8, score=39.5]; Pentatricopeptide repeat domain [PF13812.8, score=32.4]} {Dmel: FBgn0035591, CG4611, [RH, Score=62.0, Expect=1e-09]} {Smed: dd_Smed_v6_8676_0_1, dd_Smed_v6_8676_0_1, [RH, Score=78.6, Expect=4e-15]} {RNA1509_11091, RNA1509_17932} {RNA1310_4937.2, RNA1509_11091, RNA1509_17932} {RNA1509_11091, RNA1509_17932, RNA815_928} Mlig455_041487 {REF} {Length: 2559} {TRANSSPLICED} {Pfam: PPR repeat family [PF13041.8, score=39.9]; Pentatricopeptide repeat domain [PF13812.8, score=33.7]} {Smed: dd_Smed_v6_8676_0_2, dd_Smed_v6_8676_0_2, [Score=75.5, Expect=2e-14]} {RNA1509_17932} {RNA1310_4937.1} {RNA815_928} |
|
| 13. | MligTC455_31014 | 201 | 4.19 | Mlig455_026546 | Neo: Int S/G2/M Age: Up-Down-Down |
PRR9 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_026546 {REF} {Length: 1557} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=1e-06]} {RNA1509_25089} {RNA1310_3745} {RNA815_38208.1} |
| 14. | MligTC455_18894 | 1132 | 23.59 | Mlig455_021180 | Neo: Irradiation Age: - |
DDX52 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_021180 {REF} {Length: 1746} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=113.8]; Helicase conserved C-terminal domain [PF00271.33, score=87.4]} {Human: ENSG00000278053, DDX52, DExD-box helicase 52, [RH, Score=288, Expect=8e-90]; ENSG00000277594, DDX52, DExD-box helicase 52, [RH, Score=287, Expect=3e-89]} {Mouse: ENSMUSG00000020677, Ddx52, DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, [RH, Score=289, Expect=5e-90]} {Dmel: FBgn0036754, CG5589, [RH, Score=278, Expect=4e-86]} {Celegans: WBGene00011032, R05D11.4, [RH, Score=251, Expect=3e-76]} {Smed: dd_Smed_v6_7870_0_1, dd_Smed_v6_7870_0_1, [RH, Score=245, Expect=3e-75]} {RNA1509_7314} {RNA1310_15587, RNA1509_7314} {RNA1509_7314, RNA815_6774} |
| 15. | MligTC455_18896 | 1136 | 23.67 | Mlig455_057881 | Neo: Irradiation Age: Down-Up-Up |
DDX52 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_057881 {REF} {Length: 1741} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=115.0]; Helicase conserved C-terminal domain [PF00271.33, score=87.4]} {Human: ENSG00000278053, DDX52, DExD-box helicase 52, [RH, Score=289, Expect=6e-90]; ENSG00000277594, DDX52, DExD-box helicase 52, [RH, Score=288, Expect=2e-89]} {Mouse: ENSMUSG00000020677, Ddx52, DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, [RH, Score=289, Expect=3e-90]} {Dmel: FBgn0036754, CG5589, [RH, Score=278, Expect=5e-86]} {Celegans: WBGene00011032, R05D11.4, [RH, Score=253, Expect=6e-77]} {Smed: dd_Smed_v6_7870_0_1, dd_Smed_v6_7870_0_1, [RH, Score=246, Expect=2e-75]} {RNA1509_7314} {RNA1310_15587} {RNA815_6774} |
| 16. | MligTC455_19018 | 930 | 19.37 | Mlig455_048895 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.318 Region-enriched R4: 1.503/0.01937 |
SPATA5 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_048895 {REF} {Length: 2542} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=194.2]; AAA ATPase domain [PF13191.8, score=40.9]; AAA+ lid domain [PF17862.3, score=36.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=33.3]; AAA domain [PF13671.8, score=27.6]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.1]; Protein of unknown function (DUF815) [PF05673.15, score=23.4]; TIP49 P-loop domain [PF06068.15, score=22.5]; AAA domain [PF13173.8, score=20.5]; RNA helicase [PF00910.24, score=20.0]} {Human: ENSG00000145375, SPATA5, spermatogenesis associated 5, [Score=273, Expect=9e-79]} {Mouse: ENSMUSG00000027722, Spata5, spermatogenesis associated 5, [Score=280, Expect=3e-81]} {Dmel: FBgn0261014, TER94, [Score=263, Expect=3e-76]} {Celegans: WBGene00008053, cdc-48.2, Transitional endoplasmic reticulum ATPase homolog 2, [Score=251, Expect=6e-72]} {Smed: dd_Smed_v6_482_0_1, dd_Smed_v6_482_0_1, [Score=238, Expect=5e-67]} {RNA1509_10485} {RNA1310_8530.1} {RNA815_905} |
| 17. | MligTC455_47941 | 3138 | 65.37 | Mlig455_035449 | Neo: - Age: logFC(26M/2M)=0.189 Region-enriched R5: 2.316/0.00000 |
GLOD4 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_035449 {REF} {Length: 1373} {TRANSSPLICED} {Pfam: Glyoxalase-like domain [PF18029.3, score=37.5]; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily [PF00903.27, score=35.8]} {Human: ENSG00000167699, GLOD4, glyoxalase domain containing 4, [RH, Score=335, Expect=8e-115]} {Mouse: ENSMUSG00000017286, Glod4, glyoxalase domain containing 4, [RH, Score=327, Expect=4e-112]} {Dmel: FBgn0031143, CG1532, [RH, Score=289, Expect=3e-97]} {Celegans: WBGene00006448, glod-4, Glyoxalase 1, [RH, Score=271, Expect=2e-90]} {Smed: dd_Smed_v6_6021_0_1, dd_Smed_v6_6021_0_1, [RH, Score=247, Expect=6e-81]} {RNA1509_11895, RNA1509_6383} {RNA1310_19525, RNA1509_11895, RNA1509_6383} {RNA1509_11895, RNA1509_6383, RNA815_10190} |
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