TomoSeq data search

Data search

Results for MligTC455_42521

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42521

1234

25.71

Mlig455_020214

Neo: -

Age: -

CYP2J2

Mlig455_020214 {REF} {Length: 2952} {Pfam: Cytochrome P450 [PF00067.24, score=246.4]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=203, Expect=4e-58]} {Mouse: ENSMUSG00000015224, Cyp2j9, cytochrome P450, family 2, subfamily j, polypeptide 9, [Score=204, Expect=2e-58]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=203, Expect=4e-58]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=201, Expect=3e-57]; ENSMUSG00000066097, Cyp2j11, cytochrome P450, family 2, subfamily j, polypeptide 11, [Score=197, Expect=1e-55]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=195, Expect=5e-55]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=194, Expect=1e-54]} {Dmel: FBgn0036910, Cyp305a1, [Score=146, Expect=9e-38]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=178, Expect=2e-49]} {Smed: dd_Smed_v6_8600_0_1, dd_Smed_v6_8600_0_1, [Score=177, Expect=5e-49]} {RNA1509_10235, RNA1509_36661} {RNA1310_5749.1, RNA1509_10235, RNA1509_36661} {RNA1509_10235, RNA1509_36661, RNA815_5879}

Cumulative graph for MligTC455_42521

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.491	4.977	0.55520	1.00000
RegionR2	-0.473	4.977	0.15309	0.48917
RegionR3	0.098	4.977	0.70474	1.00000
RegionR4	0.457	4.977	0.15767	0.41309
RegionR5	-0.522	4.977	0.04417	0.17133
RegionR6	-0.005	4.977	0.98480	1.00000
RegionR7	0.071	4.977	0.84449	1.00000
RegionR8	-0.115	4.977	0.81730	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.751	4.977	0.00557	0.36142
RegenerationR2	0.415	4.977	0.10559	0.51106
RegenerationR3	-0.282	4.977	0.31943	0.74771
RegenerationR4	-0.215	4.977	0.47020	0.85361
RegenerationR5	0.475	4.977	0.08702	0.45450
RegenerationR6	0.035	4.977	0.90552	1.00000
RegenerationBL	-0.202	4.977	0.57425	0.92738
RegenerationTP	-0.624	4.977	0.15107	0.57569

Genes with expression patterns similar to MligTC455_42521

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42521	1234	25.71	Mlig455_020214	Neo: - Age: -	CYP2J2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020214 {REF} {Length: 2952} {Pfam: Cytochrome P450 [PF00067.24, score=246.4]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=203, Expect=4e-58]} {Mouse: ENSMUSG00000015224, Cyp2j9, cytochrome P450, family 2, subfamily j, polypeptide 9, [Score=204, Expect=2e-58]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=203, Expect=4e-58]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=201, Expect=3e-57]; ENSMUSG00000066097, Cyp2j11, cytochrome P450, family 2, subfamily j, polypeptide 11, [Score=197, Expect=1e-55]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=195, Expect=5e-55]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=194, Expect=1e-54]} {Dmel: FBgn0036910, Cyp305a1, [Score=146, Expect=9e-38]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=178, Expect=2e-49]} {Smed: dd_Smed_v6_8600_0_1, dd_Smed_v6_8600_0_1, [Score=177, Expect=5e-49]} {RNA1509_10235, RNA1509_36661} {RNA1310_5749.1, RNA1509_10235, RNA1509_36661} {RNA1509_10235, RNA1509_36661, RNA815_5879}
2.	MligTC455_05697	384	8	Mlig455_020926	Neo: - Age: -	CTSA	2.504	-	-	-	0.816	0.722	0.966	Mlig455_020926 {REF} {Length: 1302} {Pfam: Serine carboxypeptidase [PF00450.24, score=274.7]} {Human: ENSG00000064601, CTSA, cathepsin A, [Score=194, Expect=6e-56]} {Mouse: ENSMUSG00000017760, Ctsa, cathepsin A, [Score=182, Expect=8e-52]} {Dmel: FBgn0038738, CG4572, [Score=109, Expect=1e-25]} {Celegans: WBGene00019605, ctsa-1, Uncharacterized serine carboxypeptidase ctsa-1, [Score=192, Expect=6e-56]} {Smed: dd_Smed_v6_785_0_1, dd_Smed_v6_785_0_1, [Score=172, Expect=2e-48]} {RNA1509_18333} {RNA1310_12718} {RNA815_3781}
3.	MligTC455_05696	389	8.11	Mlig455_007588	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.428	CTSA	2.494	-	-	-	0.815	0.722	0.957	Mlig455_007588 {REF} {Length: 1668} {Pfam: Serine carboxypeptidase [PF00450.24, score=274.7]} {Human: ENSG00000064601, CTSA, cathepsin A, [Score=194, Expect=6e-56]} {Mouse: ENSMUSG00000017760, Ctsa, cathepsin A, [Score=182, Expect=8e-52]} {Dmel: FBgn0038738, CG4572, [Score=109, Expect=1e-25]} {Celegans: WBGene00019605, ctsa-1, Uncharacterized serine carboxypeptidase ctsa-1, [Score=192, Expect=6e-56]} {Smed: dd_Smed_v6_785_0_1, dd_Smed_v6_785_0_1, [Score=172, Expect=2e-48]} {RNA1509_18333} {RNA1310_12718} {RNA815_3781}
4.	MligTC455_26281	697	14.53	Mlig455_022872	Neo: - Age: -	CYP2U1	1.746	-	-	-	0.963	-	0.783	Mlig455_022872 {REF} {Length: 2676} {Pfam: Cytochrome P450 [PF00067.24, score=219.8]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=167, Expect=2e-49]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=163, Expect=1e-46]; ENSG00000186104, CYP2R1, cytochrome P450 family 2 subfamily R member 1, [Score=160, Expect=2e-47]; ENSG00000255974, CYP2A6, cytochrome P450 family 2 subfamily A member 6, [Score=159, Expect=3e-45]} {Mouse: ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=164, Expect=5e-47]; ENSMUSG00000030483, Cyp2b10, cytochrome P450, family 2, subfamily b, polypeptide 10, [Score=163, Expect=1e-46]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=163, Expect=1e-46]; ENSMUSG00000040660, Cyp2b9, cytochrome P450, family 2, subfamily b, polypeptide 9, [Score=162, Expect=2e-46]; ENSMUSG00000060407, Cyp2a12, cytochrome P450, family 2, subfamily a, polypeptide 12, [Score=162, Expect=3e-46]; ENSMUSG00000049685, Cyp2g1, cytochrome P450, family 2, subfamily g, polypeptide 1, [Score=162, Expect=3e-46]; ENSMUSG00000040583, Cyp2b13, cytochrome P450, family 2, subfamily b, polypeptide 13, [Score=162, Expect=2e-46]; ENSMUSG00000030670, Cyp2r1, cytochrome P450, family 2, subfamily r, polypeptide 1, [Score=157, Expect=3e-46]; ENSMUSG00000040650, Cyp2b23, cytochrome P450, family 2, subfamily b, polypeptide 23, [Score=156, Expect=3e-44]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=134, Expect=5e-36]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=160, Expect=1e-45]} {Smed: dd_Smed_v6_2351_0_3, dd_Smed_v6_2351_0_3, [Score=201, Expect=2e-61]} {RNA1509_32151} {RNA1310_10092} {RNA815_723}
5.	MligTC455_45577	174	3.62	Mlig455_044761	Neo: Irradiation Age: -	FMN2	0.966	-	-	-	-	-	0.966	Mlig455_044761 {REF} {Length: 7828} {Pfam: Formin Homology 2 Domain [PF02181.25, score=219.6]; FHA domain [PF00498.28, score=53.2]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=21.6]} {Human: ENSG00000155816, FMN2, formin 2, [Score=214, Expect=4e-55]} {Mouse: ENSMUSG00000028354, Fmn2, formin 2, [Score=208, Expect=1e-53]} {Dmel: FBgn0025641, DAAM, Dishevelled Associated Activator of Morphogenesis, [Score=100, Expect=1e-20]} {Celegans: WBGene00018976, daam-1, DAAM (Disheveled-Associated Activator of Morphogenesis) homolog, [Score=110, Expect=9e-24]} {Smed: dd_Smed_v6_8222_0_5, dd_Smed_v6_8222_0_5, [Score=103, Expect=8e-22]} {RNA1509_33858} {RNA1310_2361} {RNA815_10206}
6.	MligTC455_28197	274	5.71	Mlig455_023906	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_023906 {REF} {Length: 1668} {Pfam: African swine fever virus J13L protein [PF05568.13, score=19.3]} {RNA1509_19556} {RNA1310_9365} {RNA815_12631}
7.	MligTC455_28309	78	1.63	Mlig455_021915	Neo: - Age: Up-Down-Up	FAT3	0.963	-	-	-	-	-	0.963	Mlig455_021915 {REF} {Length: 12300} {Pfam: Cadherin domain [PF00028.19, score=270.9]; Cadherin-like [PF16184.7, score=24.6]} {Human: ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=238, Expect=2e-64]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=246, Expect=3e-67]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=243, Expect=2e-66]} {Dmel: FBgn0261574, kug, kugelei, [Score=245, Expect=3e-67]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=193, Expect=2e-50]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=196, Expect=2e-51]} {RNA1509_14139} {RNA1310_570.1} {RNA815_134.1}
8.	MligTC455_30381	280	5.84	Mlig455_029588	Neo: - Age: -	TRAF6	0.961	-	-	-	-	-	0.961	Mlig455_029588 {REF} {Length: 2041} {Pfam: TRAF-type zinc finger [PF02176.20, score=39.9]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=90.1, Expect=6e-19]; ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=89.4, Expect=1e-18]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=93.2, Expect=4e-20]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=91.7, Expect=4e-20]} {RNA1509_16871} {RNA1310_25901} {RNA815_11260}
9.	MligTC455_06366	91	1.9	Mlig455_016231	Neo: - Age: - Regeneration-enriched R4: 5.696 Regeneration-enriched R3: 4.183 Regeneration-enriched R5: 3.725		0.957	-	-	-	-	-	0.957	Mlig455_016231 {REF} {Length: 1025} {RNA1509_30385} {RNA1310_44991} {RNA815_16984}
10.	MligTC455_28199	267	5.56	Mlig455_059062	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_059062 {REF} {Length: 1150} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=95.8]} {RNA1509_5424} {RNA1310_9365} {RNA815_12631}
11.	MligTC455_42356	167	3.48	Mlig455_039463	Neo: - Age: Up-Down-Down	MEPCE	0.957	-	-	-	-	-	0.957	Mlig455_039463 {REF} {Length: 2698} {TRANSSPLICED} {Pfam: Bicoid-interacting protein 3 (Bin3) [PF06859.14, score=111.1]; Methyltransferase domain [PF13649.8, score=35.5]; Methyltransferase domain [PF08242.14, score=32.8]; Methyltransferase domain [PF13489.8, score=31.7]; Methyltransferase domain [PF13847.8, score=31.1]; Methyltransferase domain [PF08241.14, score=30.0]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=20.7]; Methyltransferase small domain [PF05175.16, score=20.1]} {Human: ENSG00000146834, MEPCE, methylphosphate capping enzyme, [Score=171, Expect=3e-45]} {Mouse: ENSMUSG00000029726, Mepce, methylphosphate capping enzyme, [Score=171, Expect=2e-45]} {Dmel: FBgn0037368, CG1239, [Score=145, Expect=3e-39]} {Celegans: WBGene00012469, Y17G7B.18, Probable RNA methyltransferase Y17G7B.18, [Score=162, Expect=2e-44]} {Smed: dd_Smed_v6_8153_0_1, dd_Smed_v6_8153_0_1, [RH, Score=125, Expect=4e-31]} {RNA1509_14163} {RNA1310_14404.2, RNA1509_14163} {RNA1509_14163, RNA815_5431}
12.	MligTC455_10943	424	8.84	Mlig455_066927	Neo: - Age: logFC(26M/2M)=0.441		0.956	-	-	-	0.956	-	-	Mlig455_066927 {REF} {Length: 2250} {RNA1509_32021} {RNA1310_12733.1, RNA1509_32021} {RNA1509_32021, RNA815_5183.1}
13.	MligTC455_19637	2110	43.95	Mlig455_015648	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_015648 {REF} {Length: 4085} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=39.2]; HMG-box domain [PF09011.12, score=32.4]} {Smed: dd_Smed_v6_10010_0_1, dd_Smed_v6_10010_0_1, [Score=47.8, Expect=9e-06]} {RNA1509_3630} {RNA1310_12490} {RNA815_3935}
14.	MligTC455_08873	198	4.13	Mlig455_022707	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_022707 {REF} {Length: 1291} {NoTransDecoderORF} {RNA1509_54108} {RNA1310_112068, RNA1509_54108} {RNA1509_54108, RNA815_23859}

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