Data search
Results for MligTC455_45577
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45577 | 174 | 3.62 | Mlig455_044761 | Neo: Irradiation Age: - |
FMN2 | Mlig455_044761 {REF} {Length: 7828} {Pfam: Formin Homology 2 Domain [PF02181.25, score=219.6]; FHA domain [PF00498.28, score=53.2]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=21.6]} {Human: ENSG00000155816, FMN2, formin 2, [Score=214, Expect=4e-55]} {Mouse: ENSMUSG00000028354, Fmn2, formin 2, [Score=208, Expect=1e-53]} {Dmel: FBgn0025641, DAAM, Dishevelled Associated Activator of Morphogenesis, [Score=100, Expect=1e-20]} {Celegans: WBGene00018976, daam-1, DAAM (Disheveled-Associated Activator of Morphogenesis) homolog, [Score=110, Expect=9e-24]} {Smed: dd_Smed_v6_8222_0_5, dd_Smed_v6_8222_0_5, [Score=103, Expect=8e-22]} {RNA1509_33858} {RNA1310_2361} {RNA815_10206} |
Cumulative graph for MligTC455_45577
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.677 | 2.691 | 0.20924 | 0.84906 | |
| RegionR2 | 0.541 | 2.691 | 0.62453 | 0.96720 | |
| RegionR3 | 0.478 | 2.691 | 0.62251 | 1.00000 | |
| RegionR4 | 1.671 | 2.691 | 0.10987 | 0.32757 | |
| RegionR5 | 1.495 | 2.691 | 0.05558 | 0.20201 | |
| RegionR6 | 1.016 | 2.691 | 0.28419 | 0.87440 | |
| RegionR7 | 0.31 | 2.691 | 0.73797 | 1.00000 | |
| RegionR8 | 0.166 | 2.691 | 0.80915 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.555 | 2.691 | 0.99979 | 1.00000 | |
| RegenerationR2 | 0.348 | 2.691 | 0.59983 | 0.91545 | |
| RegenerationR3 | -0.482 | 2.691 | 0.53040 | 0.87230 | |
| RegenerationR4 | -0.753 | 2.691 | 0.36092 | 0.78784 | |
| RegenerationR5 | -1.004 | 2.691 | 0.15712 | 0.57835 | |
| RegenerationR6 | -1.269 | 2.691 | 0.11971 | 0.42513 | |
| RegenerationBL | -0.57 | 2.691 | 0.59334 | 0.94260 | |
| RegenerationTP | -1.46 | 2.691 | 0.23553 | 0.68121 |
Genes with expression patterns similar to MligTC455_45577
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45577 | 174 | 3.62 | Mlig455_044761 | Neo: Irradiation Age: - |
FMN2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044761 {REF} {Length: 7828} {Pfam: Formin Homology 2 Domain [PF02181.25, score=219.6]; FHA domain [PF00498.28, score=53.2]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=21.6]} {Human: ENSG00000155816, FMN2, formin 2, [Score=214, Expect=4e-55]} {Mouse: ENSMUSG00000028354, Fmn2, formin 2, [Score=208, Expect=1e-53]} {Dmel: FBgn0025641, DAAM, Dishevelled Associated Activator of Morphogenesis, [Score=100, Expect=1e-20]} {Celegans: WBGene00018976, daam-1, DAAM (Disheveled-Associated Activator of Morphogenesis) homolog, [Score=110, Expect=9e-24]} {Smed: dd_Smed_v6_8222_0_5, dd_Smed_v6_8222_0_5, [Score=103, Expect=8e-22]} {RNA1509_33858} {RNA1310_2361} {RNA815_10206} |
| 2. | MligTC455_42521 | 1234 | 25.71 | Mlig455_020214 | Neo: - Age: - |
CYP2J2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_020214 {REF} {Length: 2952} {Pfam: Cytochrome P450 [PF00067.24, score=246.4]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=203, Expect=4e-58]} {Mouse: ENSMUSG00000015224, Cyp2j9, cytochrome P450, family 2, subfamily j, polypeptide 9, [Score=204, Expect=2e-58]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=203, Expect=4e-58]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=201, Expect=3e-57]; ENSMUSG00000066097, Cyp2j11, cytochrome P450, family 2, subfamily j, polypeptide 11, [Score=197, Expect=1e-55]; ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=195, Expect=5e-55]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=194, Expect=1e-54]} {Dmel: FBgn0036910, Cyp305a1, [Score=146, Expect=9e-38]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=178, Expect=2e-49]} {Smed: dd_Smed_v6_8600_0_1, dd_Smed_v6_8600_0_1, [Score=177, Expect=5e-49]} {RNA1509_10235, RNA1509_36661} {RNA1310_5749.1, RNA1509_10235, RNA1509_36661} {RNA1509_10235, RNA1509_36661, RNA815_5879} |
| 3. | MligTC455_32706 | 129 | 2.68 | Mlig455_009687 | Neo: - Age: - |
HERC4 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_009687 {REF} {Length: 3788} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=142.5]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=122.2]} {Human: ENSG00000148634, HERC4, HECT and RLD domain containing E3 ubiquitin protein ligase 4, [Score=98.2, Expect=2e-20]} {Mouse: ENSMUSG00000030839, Sergef, secretion regulating guanine nucleotide exchange factor, [RH, Score=107, Expect=2e-24]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=116, Expect=2e-26]} {Celegans: WBGene00017195, glo-4, X-linked retinitis pigmentosa GTPase regulator homolog, [RH, Score=95.9, Expect=4e-20]} {Smed: dd_Smed_v6_16647_0_1, dd_Smed_v6_16647_0_1, [RH, Score=131, Expect=5e-32]} {RNA1509_27199} {RNA1310_3241.1, RNA1509_27199} {RNA1509_27199, RNA815_13346} |
Berezikov Lab - 2020-2021 © ERIBA