TomoSeq data search

Data search

Results for MligTC455_42522

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42522

34

0.70

Mlig455_006416

Neo: -

Age: -

Mlig455_006416 {REF} {Length: 1135} {Pfam: Nucleotide-binding C-terminal domain [PF17042.7, score=19.7]} {RNA1509_29406} {RNA1310_30762} {RNA815_22447}

Cumulative graph for MligTC455_42522

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.479	1.209	1.00000	1.00000
RegionR2	0.256	1.209	0.99926	1.00000
RegionR3	0.868	1.209	0.40522	0.93236
RegionR4	-0.916	1.209	0.79604	1.00000
RegionR5	4.275	1.209	0.05414	0.19841
RegionR6	2.52	1.209	0.19550	0.76407
RegionR7	-1.13	1.209	1.00000	1.00000
RegionR8	-1.392	1.209	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.098	1.209	0.99987	1.00000
RegenerationR2	2.17	1.209	0.27759	0.72152
RegenerationR3	1.169	1.209	0.58063	0.89898
RegenerationR4	1.152	1.209	0.54482	0.89040
RegenerationR5	0.225	1.209	0.68132	0.94415
RegenerationR6	-2.97	1.209	0.30629	0.65490
RegenerationBL	3.722	1.209	0.16041	0.48046
RegenerationTP	0.336	1.209	0.99938	1.00000

Genes with expression patterns similar to MligTC455_42522

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42522	34	0.7	Mlig455_006416	Neo: - Age: -		4	1.000	-	1.000	-	1.000	1.000	Mlig455_006416 {REF} {Length: 1135} {Pfam: Nucleotide-binding C-terminal domain [PF17042.7, score=19.7]} {RNA1509_29406} {RNA1310_30762} {RNA815_22447}
2.	MligTC455_20475	85	1.78	Mlig455_002468, Mlig455_045914	Neo: Irradiation Age: Down-Up-Up Region-enriched R2: 11.940/0.00005 Region-enriched R5: 8.488/0.00186 Region-enriched R6: 7.904/0.01329	UNC45B	2.655	0.917	-	0.955	-	0.783	-	Mlig455_002468 {REF} {Length: 1884} {Human: ENSG00000141161, UNC45B, unc-45 myosin chaperone B, [Score=72.8, Expect=2e-15]} {Mouse: ENSMUSG00000018845, Unc45b, unc-45 myosin chaperone B, [Score=71.2, Expect=5e-15]} {Dmel: FBgn0010812, unc-45, uncoordinated 45, [Score=63.5, Expect=1e-12]} {Celegans: WBGene00006781, unc-45, UNC-45, [Score=57.4, Expect=2e-10]} {RNA1509_31395} {RNA1310_37524.1} {RNA815_26316} Mlig455_045914 {REF} {Length: 1402} {Human: ENSG00000141161, UNC45B, unc-45 myosin chaperone B, [Score=109, Expect=2e-27]} {Mouse: ENSMUSG00000018845, Unc45b, unc-45 myosin chaperone B, [Score=117, Expect=2e-30]} {Dmel: FBgn0010812, unc-45, uncoordinated 45, [Score=102, Expect=4e-25]} {Celegans: WBGene00006781, unc-45, UNC-45, [Score=99.4, Expect=2e-24]} {Smed: dd_Smed_v6_6344_0_1, dd_Smed_v6_6344_0_1, [Score=106, Expect=6e-27]} {RNA1310_29568} {RNA815_35563}
3.	MligTC455_24298	67	1.39	Mlig455_059907	Neo: Irradiation Age: Up-Down-Up Region-enriched R5: 4.165/0.00034	TYR	2.612	0.881	-	0.960	-	-	0.771	Mlig455_059907 {REF} {Length: 2123} {Pfam: Common central domain of tyrosinase [PF00264.22, score=105.4]} {Human: ENSG00000077498, TYR, tyrosinase, [Score=206, Expect=2e-59]} {Mouse: ENSMUSG00000004651, Tyr, tyrosinase, [Score=210, Expect=3e-61]} {Celegans: WBGene00015332, tyr-1, Putative tyrosinase-like protein tyr-1, [RH, Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_18243_0_1, dd_Smed_v6_18243_0_1, [Score=261, Expect=7e-82]} {RNA1509_30640} {RNA1310_17348} {RNA815_4567.1}
4.	MligTC455_38351	81	1.68	Mlig455_009107	Neo: - Age: -		2.49	-	-	0.955	-	0.768	0.767	Mlig455_009107 {REF} {Length: 1521} {RNA1509_37368} {RNA1310_24656} {RNA815_16237}
5.	MligTC455_14979	298	6.22	Mlig455_001543, Mlig455_046559	Neo: Germline Age: - Region-enriched R2: 5.497/0.00789 Region-enriched R5: 4.546/0.00003 Regeneration-upregulated R4: 6.777 Regeneration-enriched R4: 6.777	RPH3AL	2.486	0.815	-	0.952	-	-	0.719	Mlig455_001543 {REF} {Length: 1701} {Pfam: FYVE-type zinc finger [PF02318.18, score=58.3]} {Human: ENSG00000262334, RPH3AL, rabphilin 3A like (without C2 domains), [Score=89.4, Expect=5e-21]; ENSG00000181031, RPH3AL, rabphilin 3A like (without C2 domains), [Score=89.4, Expect=5e-21]} {Mouse: ENSMUSG00000020847, Rph3al, rabphilin 3A-like (without C2 domains), [Score=84.7, Expect=1e-18]} {Dmel: FBgn0030230, Rph, Rabphilin, [Score=85.1, Expect=3e-18]} {Celegans: WBGene00004316, rbf-1, Rabphilin-1, [Score=80.9, Expect=6e-17]} {Smed: dd_Smed_v6_12977_0_2, dd_Smed_v6_12977_0_2, [Score=61.6, Expect=1e-10]} {RNA1509_37845} {RNA1310_28385, RNA1509_37845} {RNA1509_37845, RNA815_21261} Mlig455_046559 {REF} {Length: 3945} {Pfam: FYVE-type zinc finger [PF02318.18, score=56.2]} {Human: ENSG00000262334, RPH3AL, rabphilin 3A like (without C2 domains), [Score=90.1, Expect=1e-20]; ENSG00000181031, RPH3AL, rabphilin 3A like (without C2 domains), [Score=90.1, Expect=1e-20]} {Mouse: ENSMUSG00000020847, Rph3al, rabphilin 3A-like (without C2 domains), [Score=85.9, Expect=2e-18]} {Dmel: FBgn0030230, Rph, Rabphilin, [Score=86.3, Expect=6e-18]} {Celegans: WBGene00004316, rbf-1, Rabphilin-1, [Score=82.8, Expect=7e-17]} {Smed: dd_Smed_v6_12977_0_2, dd_Smed_v6_12977_0_2, [Score=61.2, Expect=4e-10]} {RNA1509_37845} {RNA1310_28385} {RNA815_21261}
6.	MligTC455_27742	216	4.49	Mlig455_020706	Neo: Irradiation Age: - Region-enriched R2: 4.070/0.03422 Region-enriched R5: 2.875/0.00106	TMED3	1.846	-	-	0.955	-	-	0.891	Mlig455_020706 {REF} {Length: 1854} {TRANSSPLICED} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=82.1]} {Human: ENSG00000166557, TMED3, transmembrane p24 trafficking protein 3, [Score=75.9, Expect=4e-15]; ENSG00000117500, TMED5, transmembrane p24 trafficking protein 5, [Score=73.9, Expect=2e-14]} {Mouse: ENSMUSG00000063406, Tmed5, transmembrane p24 trafficking protein 5, [Score=74.7, Expect=7e-15]; ENSMUSG00000032353, Tmed3, transmembrane p24 trafficking protein 3, [Score=73.9, Expect=1e-14]} {Dmel: FBgn0051787, CG31787, [Score=73.9, Expect=9e-15]} {Celegans: WBGene00010670, K08E4.6, [Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_3127_0_1, dd_Smed_v6_3127_0_1, [Score=84.7, Expect=4e-18]} {RNA1509_20798} {RNA1310_17461} {RNA815_5363}
7.	MligTC455_01701	8	0.16	Mlig455_024347, Mlig455_024464	Neo: - Age: -		1.693	-	-	0.955	-	0.738	-	Mlig455_024347 {REF} {Length: 553} {RNA1310_102456} Mlig455_024464 {REF} {Length: 384} {RNA1310_102456}
8.	MligTC455_26288	33	0.68	Mlig455_030608, Mlig455_031031	Neo: - Age: logFC(26M/2M)=1.312	RARRES3	0.975	-	-	0.975	-	-	-	Mlig455_030608 {REF} {Length: 893} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=64.5]} {Human: ENSG00000133321, RARRES3, retinoic acid receptor responder 3, [Score=65.9, Expect=5e-13]} {Mouse: ENSMUSG00000060675, Pla2g16, phospholipase A2, group XVI, [RH, Score=58.5, Expect=2e-10]; ENSMUSG00000022525, Hrasls, HRAS-like suppressor, [RH, Score=58.5, Expect=2e-10]} {RNA1310_36500.1} {RNA815_19807} Mlig455_031031 {REF} {Length: 4200} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=64.5]} {Human: ENSG00000133321, RARRES3, retinoic acid receptor responder 3, [Score=65.9, Expect=5e-13]} {Mouse: ENSMUSG00000060675, Pla2g16, phospholipase A2, group XVI, [RH, Score=58.5, Expect=2e-10]; ENSMUSG00000022525, Hrasls, HRAS-like suppressor, [RH, Score=58.5, Expect=2e-10]} {RNA1509_48696} {RNA1310_17404.1, RNA1509_48696} {RNA1509_48696, RNA815_5685.1}
9.	MligTC455_13118	98	2.05	Mlig455_038541, Mlig455_054578, Mlig455_060542	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_038541 {REF} {Length: 725} {RNA1310_82376} Mlig455_054578 {REF} {Length: 1821} {RNA1310_41271.2} Mlig455_060542 {REF} {Length: 2284} {RNA1310_41271.2}
10.	MligTC455_13623	7	0.14	Mlig455_043472	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_043472 {REF} {Length: 1449} {RNA1509_39881} {RNA1310_62183} {RNA815_31036}
11.	MligTC455_15292	43	0.9	Mlig455_004603	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_004603 {REF} {Length: 469} {NoTransDecoderORF} {RNA1310_107213} {RNA815_57200}
12.	MligTC455_47050	11	0.23	Mlig455_002189	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_002189 {REF} {Length: 530} {NoTransDecoderORF} {RNA1509_36887} {RNA1310_47240.2} {RNA815_25194}
13.	MligTC455_18793	44	0.93	Mlig455_017865	Neo: - Age: - Region-enriched R3: 3.448/0.03913		0.953	-	-	-	-	0.953	-	Mlig455_017865 {REF} {Length: 3123} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=150.7]; Protein of unknown function (DUF2722) [PF10846.10, score=17.9]} {Smed: dd_Smed_v6_13880_0_1, dd_Smed_v6_13880_0_1, [Score=122, Expect=4e-29]} {RNA1509_48682} {RNA1310_15588, RNA1509_48682} {RNA1509_48682, RNA815_9665}
14.	MligTC455_04104	196	4.09	Mlig455_012083	Neo: Int S/G2/M Age: logFC(26M/2M)=0.482 Region-enriched R5: 2.703/0.00002	TMEM201	0.951	-	-	-	-	-	0.951	Mlig455_012083 {REF} {Length: 4140} {TRANSSPLICED} {Pfam: Ima1 N-terminal domain [PF09779.11, score=110.5]} {Human: ENSG00000188807, TMEM201, transmembrane protein 201, [RH, Score=128, Expect=2e-30]} {Mouse: ENSMUSG00000044700, Tmem201, transmembrane protein 201, [RH, Score=130, Expect=5e-31]} {Dmel: FBgn0034447, CG7744, [RH, Score=123, Expect=5e-29]} {Celegans: WBGene00011994, samp-1, Spindle Associated Membrane Protein homolog, [RH, Score=98.6, Expect=3e-21]} {Smed: dd_Smed_v6_17198_0_1, dd_Smed_v6_17198_0_1, [RH, Score=103, Expect=7e-25]} {RNA1509_19432} {RNA1310_12592, RNA1509_19432} {RNA1509_19432, RNA815_559.1}

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