Data search
Results for MligTC455_42554
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42554 | 1904 | 39.67 | Mlig455_046923 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.384 Region-enriched R5: 2.508/0.00000 |
Mlig455_046923 {REF} {Length: 3377} {RNA1509_14540, RNA1509_32933, RNA1509_51554} {RNA1310_5765, RNA1509_14540, RNA1509_32933} {RNA1509_14540, RNA1509_32933, RNA815_4334.1} |
Cumulative graph for MligTC455_42554
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.64 | 5.487 | 0.01147 | 0.31050 | |
| RegionR2 | -0.222 | 5.487 | 0.70123 | 1.00000 | |
| RegionR3 | 0.094 | 5.487 | 0.84475 | 1.00000 | |
| RegionR4 | 0.26 | 5.487 | 0.63316 | 0.94105 | |
| RegionR5 | 2.508 | 5.487 | 0.00000 | 0.00000 | |
| RegionR6 | 0.879 | 5.487 | 0.05514 | 0.44101 | |
| RegionR7 | -0.565 | 5.487 | 0.30847 | 0.94260 | |
| RegionR8 | -0.314 | 5.487 | 0.61575 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.456 | 5.487 | 0.78054 | 1.00000 | |
| RegenerationR2 | 0.63 | 5.487 | 0.25178 | 0.69793 | |
| RegenerationR3 | 0.87 | 5.487 | 0.12781 | 0.54983 | |
| RegenerationR4 | 0.62 | 5.487 | 0.29567 | 0.73846 | |
| RegenerationR5 | -0.485 | 5.487 | 0.37529 | 0.78407 | |
| RegenerationR6 | 0.086 | 5.487 | 0.87994 | 1.00000 | |
| RegenerationBL | 0.765 | 5.487 | 0.12857 | 0.42676 | |
| RegenerationTP | 0.479 | 5.487 | 0.41698 | 0.84197 |
Genes with expression patterns similar to MligTC455_42554
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42554 | 1904 | 39.67 | Mlig455_046923 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.384 Region-enriched R5: 2.508/0.00000 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046923 {REF} {Length: 3377} {RNA1509_14540, RNA1509_32933, RNA1509_51554} {RNA1310_5765, RNA1509_14540, RNA1509_32933} {RNA1509_14540, RNA1509_32933, RNA815_4334.1} | |
| 2. | MligTC455_42243 | 1197 | 24.93 | Mlig455_002520 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.357 Region-specific R5: 3.136 Region-enriched R5: 2.806/0.00000 |
4.05 | 0.957 | 0.737 | 0.746 | - | 0.726 | 0.884 | Mlig455_002520 {REF} {Length: 1175} {TRANSSPLICED} {RNA1509_56655} {RNA1310_26126, RNA1509_56655} {RNA1509_56655, RNA815_12984} | |
| 3. | MligTC455_20514 | 1263 | 26.31 | Mlig455_008860 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.491/0.00005 Regeneration-upregulated BL: 1.687 Regeneration-enriched BL: 1.687 |
RPA1 | 4.034 | 0.778 | 0.706 | 0.751 | - | 0.842 | 0.957 | Mlig455_008860 {REF} {Length: 2265} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=145.1]; Replication protein A OB domain [PF16900.7, score=113.7]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=63.4]; OB-fold nucleic acid binding domain [PF01336.27, score=53.1]; Cell division control protein 24, OB domain 3 [PF17244.4, score=31.4]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=456, Expect=2e-153]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=452, Expect=9e-152]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [Score=391, Expect=1e-128]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [Score=204, Expect=2e-57]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=399, Expect=1e-132]} {RNA1509_4117} {RNA1310_8147} {RNA815_2777} |
| 4. | MligTC455_35052 | 956 | 19.92 | Mlig455_026883 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.600 Region-enriched R5: 1.591/0.00000 |
3.559 | 0.963 | 0.801 | - | - | 0.905 | 0.890 | Mlig455_026883 {REF} {Length: 5250} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=18.7]} {RNA1509_18110} {RNA1310_20306} {RNA815_4730} | |
| 5. | MligTC455_54083 | 975 | 20.32 | Mlig455_066848 | Neo: Irradiation Age: logFC(26M/2M)=0.602 Region-enriched R5: 1.847/0.00008 |
GFI1 | 3.43 | 0.954 | - | 0.745 | - | 0.853 | 0.878 | Mlig455_066848 {REF} {Length: 2798} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=31.3]; C2H2-type zinc finger [PF13894.8, score=27.0]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=22.2]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=79.7, Expect=2e-15]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=78.2, Expect=2e-15]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=81.3, Expect=6e-16]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=78.2, Expect=3e-15]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=85.9, Expect=2e-17]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=80.5, Expect=2e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=183, Expect=1e-51]} {RNA1509_4057} {RNA1310_7337} {RNA815_12480} |
| 6. | MligTC455_51528 | 921 | 19.18 | Mlig455_020631 | Neo: - Age: - Region-enriched R5: 1.263/0.02274 |
2.621 | 0.974 | - | - | - | 0.818 | 0.829 | Mlig455_020631 {REF} {Length: 1347} {RNA1509_3230} {RNA1310_14103} {RNA815_5179} | |
| 7. | MligTC455_51529 | 971 | 20.22 | Mlig455_048820 | Neo: - Age: logFC(26M/2M)=0.322 Region-enriched R5: 1.252/0.02512 |
PPP1R3C | 2.593 | 0.977 | - | - | - | 0.815 | 0.801 | Mlig455_048820 {REF} {Length: 2011} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=91.2]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=59.8]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [RH, Score=117, Expect=2e-29]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [RH, Score=110, Expect=2e-27]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [RH, Score=91.3, Expect=7e-21]} {RNA1509_3230} {RNA1310_14103, RNA1509_3230} {RNA1509_3230, RNA815_5179} |
| 8. | MligTC455_15559 | 924 | 19.26 | Mlig455_000380 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.094/0.02109 |
2.586 | 0.868 | - | - | - | 0.763 | 0.955 | Mlig455_000380 {REF} {Length: 2523} {Pfam: RNA polymerase I specific transcription initiation factor RRN3 [PF05327.13, score=23.2]} {RNA1509_15896, RNA1509_37382} {RNA1310_14412.2, RNA1509_15896, RNA1509_37382} {RNA1509_15896, RNA1509_37382, RNA815_19215} | |
| 9. | MligTC455_23654 | 191 | 3.98 | Mlig455_018002 | Neo: - Age: - Region-enriched R5: 1.946/0.00166 |
SPDYC | 2.547 | 0.952 | 0.729 | - | - | - | 0.866 | Mlig455_018002 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: Cell cycle regulatory protein [PF11357.10, score=101.1]} {Human: ENSG00000204710, SPDYC, speedy/RINGO cell cycle regulator family member C, [RH, Score=92.0, Expect=1e-20]; ENSG00000163806, SPDYA, speedy/RINGO cell cycle regulator family member A, [RH, Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000052525, Spdya, speedy/RINGO cell cycle regulator family, member A, [RH, Score=87.4, Expect=4e-19]} {Smed: dd_Smed_v6_29468_0_1, dd_Smed_v6_29468_0_1, [RH, Score=102, Expect=9e-25]} {RNA1509_12112} {RNA1310_23429, RNA1509_12112} {RNA1509_12112, RNA815_28518} |
| 10. | MligTC455_40108 | 611 | 12.73 | Mlig455_006089, Mlig455_006117 | Neo: Irradiation Age: logFC(26M/2M)=0.250 Region-enriched R2: 4.974/0.00156 |
TRPM1 | 2.535 | 0.973 | - | - | - | 0.706 | 0.856 | Mlig455_006089 {REF} {Length: 4692} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=31.3]; Ankyrin repeats (3 copies) [PF12796.9, score=29.5]; Ankyrin repeat [PF00023.32, score=25.3]; Ankyrin repeat [PF13606.8, score=20.5]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=70.9, Expect=1e-11]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=69.3, Expect=3e-11]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=65.1, Expect=5e-10]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=53.1, Expect=2e-06]} {Smed: dd_Smed_v6_15098_0_1, dd_Smed_v6_15098_0_1, [Score=64.3, Expect=4e-10]} {RNA1509_11721, RNA1509_46566, RNA1509_51297} {RNA1310_4559, RNA1509_11721, RNA1509_46566, RNA1509_51297} {RNA1509_11721, RNA1509_46566, RNA1509_51297, RNA815_3837} Mlig455_006117 {REF} {Length: 5578} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=30.8]; Ankyrin repeats (3 copies) [PF12796.9, score=30.1]; Ankyrin repeat [PF00023.32, score=25.5]; Ankyrin repeat [PF13606.8, score=23.5]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=70.9, Expect=1e-11]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=69.3, Expect=3e-11]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=65.5, Expect=4e-10]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=52.8, Expect=2e-06]} {Smed: dd_Smed_v6_15098_0_1, dd_Smed_v6_15098_0_1, [Score=65.5, Expect=2e-10]} {RNA1509_51297} {RNA1310_4559} {RNA815_3837} |
| 11. | MligTC455_32652 | 507 | 10.57 | Mlig455_053083 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.380/0.00451 |
2.443 | 0.736 | 0.728 | - | - | - | 0.979 | Mlig455_053083 {REF} {Length: 3092} {TRANSSPLICED} {RNA1509_31475, RNA1509_46208} {RNA1310_27749, RNA1509_31475, RNA1509_46208} {RNA1509_31475, RNA1509_46208, RNA815_8706.1} | |
| 12. | MligTC455_53744 | 1460 | 30.41 | Mlig455_050195, Mlig455_066979 | Neo: Irradiation Age: logFC(26M/2M)=0.297 Region-enriched R5: 3.309/0.00000 |
UNC13B | 1.827 | 0.959 | - | - | - | - | 0.868 | Mlig455_050195 {REF} {Length: 7795} {Pfam: MUN domain [PF06292.19, score=340.5]; C2 domain [PF00168.32, score=92.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=38.3]} {Human: ENSG00000198722, UNC13B, unc-13 homolog B, [Score=1161, Expect=0.0]; ENSG00000130477, UNC13A, unc-13 homolog A, [Score=1145, Expect=0.0]} {Mouse: ENSMUSG00000028456, Unc13b, unc-13 homolog B, [Score=1150, Expect=0.0]; ENSMUSG00000034799, Unc13a, unc-13 homolog A, [Score=1144, Expect=0.0]; ENSMUSG00000062151, Unc13c, unc-13 homolog C, [Score=1097, Expect=0.0]} {Dmel: FBgn0025726, unc-13, [Score=1221, Expect=0.0]} {Celegans: WBGene00006752, unc-13, Phorbol ester/diacylglycerol-binding protein unc-13, [Score=1054, Expect=0.0]} {Smed: dd_Smed_v6_11981_0_2, dd_Smed_v6_11981_0_2, [Score=1274, Expect=0.0]} {RNA1509_46805, RNA1509_48488} {RNA1310_2207.2, RNA1509_46805, RNA1509_48488} {RNA1509_46805, RNA1509_48488, RNA815_369.1} Mlig455_066979 {REF} {Length: 4445} {Pfam: MUN domain [PF06292.19, score=435.7]; C2 domain [PF00168.32, score=48.0]} {Human: ENSG00000198722, UNC13B, unc-13 homolog B, [Score=969, Expect=0.0]; ENSG00000130477, UNC13A, unc-13 homolog A, [Score=951, Expect=0.0]} {Mouse: ENSMUSG00000028456, Unc13b, unc-13 homolog B, [Score=965, Expect=0.0]; ENSMUSG00000034799, Unc13a, unc-13 homolog A, [Score=950, Expect=0.0]} {Dmel: FBgn0025726, unc-13, [Score=1024, Expect=0.0]} {Celegans: WBGene00006752, unc-13, Phorbol ester/diacylglycerol-binding protein unc-13, [Score=871, Expect=0.0]} {Smed: dd_Smed_v6_11981_0_1, dd_Smed_v6_11981_0_1, [Score=1031, Expect=0.0]} {RNA1509_52626} {RNA1310_1986.2} {RNA815_369.1} |
| 13. | MligTC455_20777 | 2906 | 60.55 | Mlig455_004405, Mlig455_037226 | Neo: - Age: logFC(26M/2M)=0.246 Region-enriched R5: 1.972/0.00000 |
1.793 | 0.962 | - | - | - | 0.831 | - | Mlig455_004405 {REF} {Length: 1384} {TRANSSPLICED} {RNA1509_28107, RNA1509_30033} {RNA1310_25755.2, RNA1509_28107} {RNA1509_28107, RNA815_25490} Mlig455_037226 {REF} {Length: 1384} {TRANSSPLICED} {RNA1509_30033} {RNA1310_25755.2, RNA1509_30033} {RNA1509_30033, RNA815_25490} |
|
| 14. | MligTC455_25605 | 1172 | 24.43 | Mlig455_002017, Mlig455_002107, Mlig455_002216 | Neo: - Age: - |
VPS53 | 1.722 | - | - | - | 0.753 | 0.969 | - | Mlig455_002017 {REF} {Length: 3893} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=313.6]} {Human: ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=664, Expect=0.0]; ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=668, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=622, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=9e-145]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=543, Expect=1e-180]} {RNA1509_25620, RNA1509_36710, RNA1509_54508} {RNA1310_3890, RNA1509_36710, RNA1509_54508} {RNA1509_36710, RNA1509_54508, RNA815_1881} Mlig455_002107 {REF} {Length: 3499} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=314.4]} {Human: ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]; ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=621, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=2e-144]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_25620} {RNA1310_3890, RNA1509_25620} {RNA1509_25620, RNA815_1881} Mlig455_002216 {REF} {Length: 3692} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=314.4]} {Human: ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]; ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=665, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=620, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=2e-144]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_24765, RNA1509_25620} {RNA1310_3890, RNA1509_24765} {RNA1509_24765, RNA815_1881} |
| 15. | MligTC455_42481 | 546 | 11.37 | Mlig455_031077, Mlig455_031111 | Neo: - Age: - Region-enriched R5: 1.698/0.00067 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_031077 {REF} {Length: 2233} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=31.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.2]} {RNA1509_32317} {RNA1310_9835, RNA1509_32317} {RNA1509_32317, RNA815_12931} Mlig455_031111 {REF} {Length: 2244} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=31.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.2]} {RNA1509_32317, RNA1509_41427} {RNA1310_9835, RNA1509_41427} {RNA1509_41427, RNA815_12931} |