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Results for MligTC455_25605

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25605 1172 24.43 Mlig455_002017, Mlig455_002107, Mlig455_002216

Neo: -

Age: -

VPS53

Mlig455_002017 {REF} {Length: 3893} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=313.6]} {Human: ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=664, Expect=0.0]; ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=668, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=622, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=9e-145]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=543, Expect=1e-180]} {RNA1509_25620, RNA1509_36710, RNA1509_54508} {RNA1310_3890, RNA1509_36710, RNA1509_54508} {RNA1509_36710, RNA1509_54508, RNA815_1881}

Mlig455_002107 {REF} {Length: 3499} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=314.4]} {Human: ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]; ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=621, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=2e-144]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_25620} {RNA1310_3890, RNA1509_25620} {RNA1509_25620, RNA815_1881}

Mlig455_002216 {REF} {Length: 3692} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=314.4]} {Human: ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]; ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=665, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=620, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=2e-144]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_24765, RNA1509_25620} {RNA1310_3890, RNA1509_24765} {RNA1509_24765, RNA815_1881}

Cumulative graph for MligTC455_25605

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.275 4.892 0.06611 0.58101
RegionR2 0.193 4.892 0.68359 1.00000
RegionR3 0.253 4.892 0.51050 0.99919
RegionR4 0.745 4.892 0.10440 0.31650
RegionR5 0.904 4.892 0.00846 0.05114
RegionR6 0.522 4.892 0.16840 0.72489
RegionR7 0.279 4.892 0.52050 1.00000
RegionR8 -0.62 4.892 0.27985 0.90521

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.465 4.892 0.30651 0.99989
RegenerationR2 -0.611 4.892 0.12066 0.54015
RegenerationR3 -0.055 4.892 0.89463 1.00000
RegenerationR4 -0.327 4.892 0.46049 0.84772
RegenerationR5 0.1 4.892 0.79695 0.98778
RegenerationR6 -0.314 4.892 0.45818 0.77622
RegenerationBL 0.579 4.892 0.17927 0.50811
RegenerationTP -0.031 4.892 0.95058 1.00000


Genes with expression patterns similar to MligTC455_25605

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25605 1172 24.43 Mlig455_002017, Mlig455_002107, Mlig455_002216

Neo: -

Age: -

VPS53 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_002017 {REF} {Length: 3893} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=313.6]} {Human: ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=664, Expect=0.0]; ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=668, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=622, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=9e-145]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=543, Expect=1e-180]} {RNA1509_25620, RNA1509_36710, RNA1509_54508} {RNA1310_3890, RNA1509_36710, RNA1509_54508} {RNA1509_36710, RNA1509_54508, RNA815_1881}

Mlig455_002107 {REF} {Length: 3499} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=314.4]} {Human: ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]; ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=621, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=2e-144]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_25620} {RNA1310_3890, RNA1509_25620} {RNA1509_25620, RNA815_1881}

Mlig455_002216 {REF} {Length: 3692} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=314.4]} {Human: ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]; ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=665, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=620, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=2e-144]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_24765, RNA1509_25620} {RNA1310_3890, RNA1509_24765} {RNA1509_24765, RNA815_1881}
2. MligTC455_48026 559 11.65 Mlig455_017075

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.927/0.00289

2.526 0.965 - 0.808 - 0.753 - Mlig455_017075 {REF} {Length: 1459} {TRANSSPLICED} {Pfam: Small subunit of serine palmitoyltransferase-like [PF11779.10, score=45.5]} {Smed: dd_Smed_v6_10999_0_1, dd_Smed_v6_10999_0_1, [RH, Score=50.8, Expect=1e-08]} {RNA1509_26033} {RNA1310_42692} {RNA815_20573}
3. MligTC455_47427 885 18.44 Mlig455_002248, Mlig455_002292

Neo: -

Age: Down-Up-Down

CNEP1R1 1.749 - 0.794 - - 0.955 -

Mlig455_002248 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: Transmembrane protein 188 [PF09771.11, score=133.9]} {Human: ENSG00000205423, CNEP1R1, CTD nuclear envelope phosphatase 1 regulatory subunit 1, [RH, Score=120, Expect=1e-35]} {Mouse: ENSMUSG00000036810, Cnep1r1, CTD nuclear envelope phosphatase 1 regulatory subunit 1, [RH, Score=120, Expect=8e-36]} {Dmel: FBgn0036090, CG8009, [RH, Score=111, Expect=1e-32]} {Celegans: WBGene00011828, nepr-1, Nuclear envelope phosphatase-regulatory subunit 1 homolog, [RH, Score=79.7, Expect=5e-20]} {Smed: dd_Smed_v6_7741_0_1, dd_Smed_v6_7741_0_1, [RH, Score=98.6, Expect=1e-27]} {RNA1509_14702} {RNA1310_22488, RNA1509_14702} {RNA1509_14702, RNA815_26788}

Mlig455_002292 {REF} {Length: 2287} {TRANSSPLICED} {Pfam: Transmembrane protein 188 [PF09771.11, score=133.7]} {Human: ENSG00000205423, CNEP1R1, CTD nuclear envelope phosphatase 1 regulatory subunit 1, [RH, Score=120, Expect=1e-35]} {Mouse: ENSMUSG00000036810, Cnep1r1, CTD nuclear envelope phosphatase 1 regulatory subunit 1, [RH, Score=120, Expect=8e-36]} {Dmel: FBgn0036090, CG8009, [RH, Score=110, Expect=7e-32]} {Celegans: WBGene00011828, nepr-1, Nuclear envelope phosphatase-regulatory subunit 1 homolog, [RH, Score=81.6, Expect=1e-20]} {Smed: dd_Smed_v6_7741_0_1, dd_Smed_v6_7741_0_1, [RH, Score=97.4, Expect=4e-27]} {RNA1509_14702, RNA1509_22650, RNA1509_55569} {RNA1310_22488, RNA1509_22650, RNA1509_55569} {RNA1509_22650, RNA1509_55569, RNA815_26788}
4. MligTC455_42554 1904 39.67 Mlig455_046923

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.384

Region-enriched R5: 2.508/0.00000

1.722 - - - 0.753 0.969 - Mlig455_046923 {REF} {Length: 3377} {RNA1509_14540, RNA1509_32933, RNA1509_51554} {RNA1310_5765, RNA1509_14540, RNA1509_32933} {RNA1509_14540, RNA1509_32933, RNA815_4334.1}
5. MligTC455_47208 1083 22.56 Mlig455_034771

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.670

Regeneration-enriched BL: 1.670

E2F4 0.973 - - - - - 0.973 Mlig455_034771 {REF} {Length: 2224} {TRANSSPLICED} {Pfam: E2F/DP family winged-helix DNA-binding domain [PF02319.22, score=89.0]; E2F transcription factor CC-MB domain [PF16421.7, score=79.6]} {Human: ENSG00000205250, E2F4, E2F transcription factor 4, [RH, Score=207, Expect=2e-62]} {Mouse: ENSMUSG00000014859, E2f4, E2F transcription factor 4, [RH, Score=206, Expect=4e-62]} {Dmel: FBgn0011766, E2f1, E2F transcription factor 1, [RH, Score=107, Expect=5e-25]} {Celegans: WBGene00001161, efl-1, E2F-like (Mammalian transcription factor); EFL-1, [RH, Score=124, Expect=2e-32]} {Smed: dd_Smed_v6_3130_0_1, dd_Smed_v6_3130_0_1, [RH, Score=110, Expect=3e-28]} {RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1310_22021, RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1509_11778, RNA1509_30431, RNA1509_39358, RNA815_22661}
6. MligTC455_26493 505 10.52 Mlig455_006100

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 2.427

Regeneration-enriched BL: 2.427

CPSF6 0.971 - - - - - 0.971 Mlig455_006100 {REF} {Length: 5141} {Human: ENSG00000111605, CPSF6, cleavage and polyadenylation specific factor 6, [Score=124, Expect=2e-31]} {Mouse: ENSMUSG00000055531, Cpsf6, cleavage and polyadenylation specific factor 6, [RH, Score=127, Expect=2e-35]} {Dmel: FBgn0035872, CG7185, [Score=125, Expect=9e-32]} {Celegans: WBGene00008362, cfim-2, Cleavage Factor IM (CFIm) homolog, [RH, Score=89.4, Expect=3e-20]} {Smed: dd_Smed_v6_4839_0_1, dd_Smed_v6_4839_0_1, [Score=133, Expect=5e-35]} {RNA1509_21346, RNA1509_8357} {RNA1310_2667.1, RNA1509_21346} {RNA1509_21346, RNA815_15488}
7. MligTC455_22539 720 15 Mlig455_002790

Neo: -

Age: -

DEUP1 0.968 - - - - - 0.968 Mlig455_002790 {REF} {Length: 2579} {TRANSSPLICED} {Pfam: Centrosomal protein of 63 kDa [PF17045.7, score=99.4]; Fez1 [PF06818.17, score=22.1]; TPR/MLP1/MLP2-like protein [PF07926.14, score=21.0]; Hyaluronan mediated motility receptor N-terminal [PF15905.7, score=19.7]} {Human: ENSG00000165325, DEUP1, deuterosome assembly protein 1, [RH, Score=79.3, Expect=7e-15]} {Mouse: ENSMUSG00000039977, Deup1, deuterosome assembly protein 1, [RH, Score=80.1, Expect=2e-15]} {RNA1509_13150} {RNA1310_6993.1} {RNA815_10504}
8. MligTC455_23693 1259 26.23 Mlig455_026716, Mlig455_051705

Neo: -

Age: -

Region-enriched R5: 1.803/0.00084

MICALL2 0.958 0.958 - - - - -

Mlig455_026716 {REF} {Length: 3744} {TRANSSPLICED} {Pfam: Bivalent Mical/EHBP Rab binding domain [PF12130.10, score=88.2]} {Human: ENSG00000164877, MICALL2, MICAL like 2, [Score=89.7, Expect=1e-17]} {Mouse: ENSMUSG00000051586, Mical3, microtubule associated monooxygenase, calponin and LIM domain containing 3, [RH, Score=74.7, Expect=4e-13]} {Smed: dd_Smed_v6_4568_0_1, dd_Smed_v6_4568_0_1, [Score=73.6, Expect=3e-13]} {RNA1509_46384} {RNA1310_2796.1} {RNA815_2459}

Mlig455_051705 {REF} {Length: 3718} {TRANSSPLICED} {Pfam: Bivalent Mical/EHBP Rab binding domain [PF12130.10, score=87.8]} {Human: ENSG00000164877, MICALL2, MICAL like 2, [Score=89.7, Expect=1e-17]} {Mouse: ENSMUSG00000051586, Mical3, microtubule associated monooxygenase, calponin and LIM domain containing 3, [RH, Score=75.1, Expect=3e-13]} {Smed: dd_Smed_v6_4568_0_1, dd_Smed_v6_4568_0_1, [Score=74.7, Expect=1e-13]} {RNA1509_46384, RNA1509_5229} {RNA1310_2796.1, RNA1509_5229} {RNA1509_5229, RNA815_2459}
9. MligTC455_11252 483 10.07 Mlig455_029371

Neo: -

Age: -

Regeneration-downregulated R2: -1.560

Regeneration-depleted R2: -1.560

KLHL21 0.957 - - 0.957 - - - Mlig455_029371 {REF} {Length: 2938} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=80.2]; BTB And C-terminal Kelch [PF07707.17, score=75.4]; Kelch motif [PF01344.27, score=53.1]; Kelch motif [PF13964.8, score=42.4]; Kelch motif [PF07646.17, score=31.8]; Galactose oxidase, central domain [PF13418.8, score=31.5]; Galactose oxidase, central domain [PF13415.8, score=20.0]} {Human: ENSG00000162413, KLHL21, kelch like family member 21, [Score=172, Expect=4e-46]} {Mouse: ENSMUSG00000073700, Klhl21, kelch-like 21, [Score=172, Expect=5e-46]} {Dmel: FBgn0034396, CG15097, [Score=163, Expect=5e-43]} {Celegans: WBGene00020030, R12E2.1, [Score=152, Expect=4e-39]} {Smed: dd_Smed_v6_7767_0_1, dd_Smed_v6_7767_0_1, [RH, Score=170, Expect=8e-46]} {RNA1509_40324} {RNA1310_14315} {RNA815_2011}
10. MligTC455_26743 705 14.69 Mlig455_024357, Mlig455_024472

Neo: -

Age: -

TBC1D10B 0.956 0.956 - - - - -

Mlig455_024357 {REF} {Length: 4906} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=170.0]} {Human: ENSG00000169221, TBC1D10B, TBC1 domain family member 10B, [RH, Score=292, Expect=2e-91]; ENSG00000099992, TBC1D10A, TBC1 domain family member 10A, [RH, Score=290, Expect=1e-93]} {Mouse: ENSMUSG00000042492, Tbc1d10b, TBC1 domain family, member 10b, [RH, Score=293, Expect=6e-92]; ENSMUSG00000034412, Tbc1d10a, TBC1 domain family, member 10a, [RH, Score=291, Expect=2e-94]} {Dmel: FBgn0037917, wkd, whacked, [RH, Score=305, Expect=1e-101]} {Celegans: WBGene00019915, tbc-10, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=265, Expect=4e-85]} {Smed: dd_Smed_v6_5522_0_2, dd_Smed_v6_5522_0_2, [RH, Score=296, Expect=5e-99]} {RNA1509_33058, RNA1509_44404, RNA1509_46690, RNA1509_47929, RNA1509_52044} {RNA1310_23976, RNA1509_33058, RNA1509_44404, RNA1509_46690, RNA1509_47929, RNA1509_52044} {RNA1509_33058, RNA1509_44404, RNA1509_46690, RNA1509_47929, RNA1509_52044, RNA815_23173}

Mlig455_024472 {REF} {Length: 4490} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=170.0]} {Human: ENSG00000169221, TBC1D10B, TBC1 domain family member 10B, [RH, Score=292, Expect=2e-91]; ENSG00000099992, TBC1D10A, TBC1 domain family member 10A, [RH, Score=290, Expect=1e-93]} {Mouse: ENSMUSG00000042492, Tbc1d10b, TBC1 domain family, member 10b, [RH, Score=293, Expect=6e-92]; ENSMUSG00000034412, Tbc1d10a, TBC1 domain family, member 10a, [RH, Score=291, Expect=2e-94]} {Dmel: FBgn0037917, wkd, whacked, [RH, Score=305, Expect=1e-101]} {Celegans: WBGene00019915, tbc-10, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=265, Expect=4e-85]} {Smed: dd_Smed_v6_5522_0_2, dd_Smed_v6_5522_0_2, [RH, Score=296, Expect=5e-99]} {RNA1509_37963, RNA1509_40386} {RNA1310_23976, RNA1509_37963} {RNA1509_37963, RNA815_23173}
11. MligTC455_25802 373 7.77 Mlig455_020238, Mlig455_040926, Mlig455_040927, Mlig455_043949

Neo: -

Age: Up-Down-Up

Region-enriched R4: 2.322/0.03456

NYNRIN 0.952 0.952 - - - - -

Mlig455_020238 {REF} {Length: 2535} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=101.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=85.5]; Integrase zinc binding domain [PF17921.3, score=59.5]; Integrase core domain [PF00665.28, score=54.8]; H2C2 zinc finger [PF09337.12, score=19.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=76.6, Expect=2e-13]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=89.7, Expect=9e-18]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=89.7, Expect=9e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=299, Expect=9e-88]} {RNA1509_41126} {RNA1310_3178} {RNA815_42463}

Mlig455_040926 {REF} {Length: 3407} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=101.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.9]; Integrase zinc binding domain [PF17921.3, score=60.1]; Integrase core domain [PF00665.28, score=54.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.7]; H2C2 zinc finger [PF09337.12, score=23.0]; Retroviral aspartyl protease [PF00077.22, score=21.7]; Aspartyl protease [PF13650.8, score=21.3]; Integrase core domain [PF13683.8, score=20.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=78.2, Expect=6e-14]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=5e-18]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=5e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=324, Expect=5e-95]} {RNA1509_41126} {RNA1310_3178} {RNA815_42463}

Mlig455_040927 {REF} {Length: 2674} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_32599} {RNA1310_1659} {RNA815_252.1}

Mlig455_043949 {REF} {Length: 2236} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=111.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=85.1]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=89.4, Expect=6e-18]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=89.4, Expect=6e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=249, Expect=9e-75]} {RNA1509_41126} {RNA1310_3178} {RNA815_42463}

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