Data search
Results for MligTC455_42629
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42629 | 1377 | 28.68 | Mlig455_034953 | Neo: - Age: logFC(26M/2M)=0.201 |
ZFYVE28 | Mlig455_034953 {REF} {Length: 4619} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=59.0]} {Human: ENSG00000159733, ZFYVE28, zinc finger FYVE-type containing 28, [RH, Score=235, Expect=3e-68]} {Mouse: ENSMUSG00000037224, Zfyve28, zinc finger, FYVE domain containing 28, [RH, Score=235, Expect=3e-68]} {Dmel: FBgn0039492, CG6051, [RH, Score=216, Expect=3e-61]} {Celegans: WBGene00003084, lst-2, Lateral signaling target protein 2, [RH, Score=213, Expect=1e-61]} {Smed: dd_Smed_v6_5416_0_1, dd_Smed_v6_5416_0_1, [RH, Score=108, Expect=3e-25]} {RNA1509_27463, RNA1509_30283, RNA1509_30718, RNA1509_38450, RNA1509_52020, RNA1509_7222} {RNA1310_9487.1, RNA1509_27463, RNA1509_30283, RNA1509_30718, RNA1509_38450, RNA1509_52020, RNA1509_7222} {RNA1509_27463, RNA1509_30283, RNA1509_30718, RNA1509_38450, RNA1509_52020, RNA1509_7222, RNA815_5026.1} |
Cumulative graph for MligTC455_42629
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.688 | 5.092 | 0.44923 | 1.00000 | |
| RegionR2 | -0.475 | 5.092 | 0.26989 | 0.65381 | |
| RegionR3 | -0.007 | 5.092 | 0.98567 | 1.00000 | |
| RegionR4 | 0.938 | 5.092 | 0.03022 | 0.13666 | |
| RegionR5 | 0.556 | 5.092 | 0.09750 | 0.29989 | |
| RegionR6 | 0.065 | 5.092 | 0.85496 | 1.00000 | |
| RegionR7 | -0.292 | 5.092 | 0.49424 | 1.00000 | |
| RegionR8 | -0.099 | 5.092 | 0.83753 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.464 | 5.092 | 0.36082 | 1.00000 | |
| RegenerationR2 | 0.126 | 5.092 | 0.75296 | 0.97426 | |
| RegenerationR3 | 0.002 | 5.092 | 0.99721 | 1.00000 | |
| RegenerationR4 | -0.098 | 5.092 | 0.82458 | 0.99545 | |
| RegenerationR5 | -0.373 | 5.092 | 0.36451 | 0.77515 | |
| RegenerationR6 | -0.334 | 5.092 | 0.44036 | 0.76407 | |
| RegenerationBL | -0.828 | 5.092 | 0.08416 | 0.33967 | |
| RegenerationTP | 0.021 | 5.092 | 0.96582 | 1.00000 |
Genes with expression patterns similar to MligTC455_42629
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42629 | 1377 | 28.68 | Mlig455_034953 | Neo: - Age: logFC(26M/2M)=0.201 |
ZFYVE28 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_034953 {REF} {Length: 4619} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=59.0]} {Human: ENSG00000159733, ZFYVE28, zinc finger FYVE-type containing 28, [RH, Score=235, Expect=3e-68]} {Mouse: ENSMUSG00000037224, Zfyve28, zinc finger, FYVE domain containing 28, [RH, Score=235, Expect=3e-68]} {Dmel: FBgn0039492, CG6051, [RH, Score=216, Expect=3e-61]} {Celegans: WBGene00003084, lst-2, Lateral signaling target protein 2, [RH, Score=213, Expect=1e-61]} {Smed: dd_Smed_v6_5416_0_1, dd_Smed_v6_5416_0_1, [RH, Score=108, Expect=3e-25]} {RNA1509_27463, RNA1509_30283, RNA1509_30718, RNA1509_38450, RNA1509_52020, RNA1509_7222} {RNA1310_9487.1, RNA1509_27463, RNA1509_30283, RNA1509_30718, RNA1509_38450, RNA1509_52020, RNA1509_7222} {RNA1509_27463, RNA1509_30283, RNA1509_30718, RNA1509_38450, RNA1509_52020, RNA1509_7222, RNA815_5026.1} |
| 2. | MligTC455_43032 | 507 | 10.56 | Mlig455_053313 | Neo: - Age: - |
ESRRG | 1.831 | 0.880 | - | - | - | - | 0.951 | Mlig455_053313 {REF} {Length: 3187} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=67.4]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=33.3]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=116, Expect=2e-28]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=113, Expect=3e-27]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=113, Expect=2e-27]} {Mouse: ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=116, Expect=2e-28]; ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=115, Expect=2e-28]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=111, Expect=7e-27]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=105, Expect=1e-24]} {Celegans: WBGene00003628, nhr-35, Nuclear hormone receptor family member nhr-35, [Score=89.4, Expect=3e-19]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=95.9, Expect=2e-21]} {RNA1509_18624, RNA1509_22064} {RNA1310_24044, RNA1509_18624} {RNA1509_18624, RNA815_8823} |
| 3. | MligTC455_50683 | 809 | 16.85 | Mlig455_035500 | Neo: - Age: Down-Up-Up |
HSPA5 | 0.979 | - | - | - | - | - | 0.979 | Mlig455_035500 {REF} {Length: 2285} {Pfam: Hsp70 protein [PF00012.22, score=335.6]; MreB/Mbl protein [PF06723.15, score=61.4]; Cell division protein FtsA [PF14450.8, score=22.4]} {Human: ENSG00000044574, HSPA5, heat shock protein family A (Hsp70) member 5, [Score=370, Expect=1e-118]} {Mouse: ENSMUSG00000026864, Hspa5, heat shock protein 5, [Score=371, Expect=6e-119]} {Dmel: FBgn0001218, Hsc70-3, Heat shock 70-kDa protein cognate 3, [Score=331, Expect=6e-104]} {Celegans: WBGene00002008, hsp-4, Heat shock 70 kDa protein D, [Score=357, Expect=8e-114]} {Smed: dd_Smed_v6_2648_0_1, dd_Smed_v6_2648_0_1, [Score=323, Expect=8e-101]} {RNA1509_7974} {RNA1310_10659} {RNA815_5041} |
| 4. | MligTC455_25825 | 693 | 14.43 | Mlig455_033137 | Neo: - Age: logFC(26M/2M)=-0.185 |
AP1G1 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_033137 {REF} {Length: 5277} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=450.9]; Adaptin C-terminal domain [PF02883.22, score=80.3]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=27.2]; HEAT repeats [PF13646.8, score=19.6]} {Human: ENSG00000166747, AP1G1, adaptor related protein complex 1 subunit gamma 1, [RH, Score=879, Expect=0.0]} {Mouse: ENSMUSG00000031731, Ap1g1, adaptor protein complex AP-1, gamma 1 subunit, [RH, Score=878, Expect=0.0]} {Dmel: FBgn0030089, AP-1gamma, Adaptor Protein complex 1, gamma subunit, [RH, Score=768, Expect=0.0]} {Celegans: WBGene00000158, apg-1, AdaPtin, Gamma chain (Clathrin associated complex), [RH, Score=755, Expect=0.0]} {Smed: dd_Smed_v6_2681_0_1, dd_Smed_v6_2681_0_1, [RH, Score=906, Expect=0.0]} {RNA1509_2475, RNA1509_43498} {RNA1310_5519, RNA1509_43498} {RNA1509_43498, RNA815_631.1} |
| 5. | MligTC455_41570 | 394 | 8.2 | Mlig455_042752 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 1.702/0.00117 |
0.964 | - | - | - | 0.964 | - | - | Mlig455_042752 {REF} {Length: 1333} {TRANSSPLICED} {RNA1509_26205, RNA1509_31270} {RNA1310_25188, RNA1509_26205, RNA1509_31270} {RNA1509_26205, RNA1509_31270, RNA815_11000} | |
| 6. | MligTC455_52399 | 129 | 2.68 | Mlig455_028953 | Neo: - Age: - |
ANK2 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_028953 {REF} {Length: 1003} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=49.3, Expect=2e-06]} {RNA1509_14690} {RNA1310_66185} {RNA815_31052} |
| 7. | MligTC455_28179 | 731 | 15.22 | Mlig455_004641, Mlig455_025062, Mlig455_025078, Mlig455_064132 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_004641 {REF} {Length: 2168} {RNA1509_44844, RNA1509_5808} {RNA1310_42249, RNA1509_44844} {RNA1509_44844, RNA815_5444.1} Mlig455_025062 {REF} {Length: 260} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_44844} {RNA1310_10196} {RNA815_35077} Mlig455_025078 {REF} {Length: 257} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_44844} {RNA1310_10196} {RNA815_35077} Mlig455_064132 {REF} {Length: 258} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_44844} {RNA1310_10196} {RNA815_35077} |
|
| 8. | MligTC455_33462 | 746 | 15.54 | Mlig455_069518 | Neo: - Age: Up-Down-Up |
MYO5B | 0.952 | - | - | - | 0.952 | - | - | Mlig455_069518 {REF} {Length: 7764} {Pfam: Myosin head (motor domain) [PF00063.23, score=802.0]; DIL domain [PF01843.21, score=76.3]; IQ calmodulin-binding motif [PF00612.29, score=39.6]} {Human: ENSG00000167306, MYO5B, myosin VB, [RH, Score=1150, Expect=0.0]; ENSG00000197535, MYO5A, myosin VA, [RH, Score=1144, Expect=0.0]} {Mouse: ENSMUSG00000025885, Myo5b, myosin VB, [RH, Score=1136, Expect=0.0]; ENSMUSG00000034593, Myo5a, myosin VA, [RH, Score=1129, Expect=0.0]} {Dmel: FBgn0261397, didum, dilute class unconventional myosin, [RH, Score=952, Expect=0.0]} {Celegans: WBGene00002036, hum-2, Heavy chain, Unconventional Myosin, [RH, Score=848, Expect=0.0]} {Smed: dd_Smed_v6_11289_0_1, dd_Smed_v6_11289_0_1, [RH, Score=966, Expect=0.0]} {RNA1509_21665, RNA1509_34303, RNA1509_34699, RNA1509_51113, RNA1509_54433, RNA1509_5841} {RNA1310_725.1, RNA1509_21665, RNA1509_34303, RNA1509_34699, RNA1509_51113, RNA1509_54433} {RNA1509_21665, RNA1509_34303, RNA1509_34699, RNA1509_51113, RNA1509_54433, RNA815_975} |
| 9. | MligTC455_19816 | 447 | 9.3 | Mlig455_026365, Mlig455_049297, Mlig455_057158 | Neo: - Age: - Region-enriched R4: 3.463/0.01197 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_026365 {REF} {Length: 576} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45712} {RNA1310_38057.2} {RNA815_23034.1} Mlig455_049297 {REF} {Length: 1481} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45712} {RNA1310_38057.1} {RNA815_23034.1} Mlig455_057158 {REF} {Length: 565} {RNA1509_45712} {RNA1310_82029} {RNA815_23034.1} |
|
| 10. | MligTC455_28311 | 1108 | 23.07 | Mlig455_056769 | Neo: Irradiation Age: logFC(26M/2M)=0.168 |
DRG1 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_056769 {REF} {Length: 5905} {Pfam: C-terminal region of MMR_HSR1 domain [PF16897.7, score=136.4]; TGS domain [PF02824.23, score=84.8]; 50S ribosome-binding GTPase [PF01926.25, score=70.2]; Ferrous iron transport protein B [PF02421.20, score=41.6]} {Human: ENSG00000185721, DRG1, developmentally regulated GTP binding protein 1, [RH, Score=616, Expect=0.0]} {Mouse: ENSMUSG00000020457, Drg1, developmentally regulated GTP binding protein 1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0010339, 128up, upstream of RpIII128, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00012126, T28D6.6, [RH, Score=608, Expect=0.0]} {Smed: dd_Smed_v6_5779_0_1, dd_Smed_v6_5779_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_14341, RNA1509_14673, RNA1509_25066, RNA1509_33301} {RNA1310_570.1, RNA1509_14341, RNA1509_14673, RNA1509_25066} {RNA1509_14341, RNA1509_14673, RNA1509_25066, RNA815_134.1} |
| 11. | MligTC455_44252 | 3395 | 70.73 | Mlig455_028205 | Neo: - Age: logFC(26M/2M)=-0.233 |
C4orf47 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_028205 {REF} {Length: 1511} {Pfam: Domain of unknown function (DUF4586) [PF15239.8, score=294.8]} {Human: ENSG00000205129, C4orf47, chromosome 4 open reading frame 47, [RH, Score=239, Expect=4e-77]} {Mouse: ENSMUSG00000071103, 1700029J07Rik, RIKEN cDNA 1700029J07 gene, [RH, Score=249, Expect=3e-81]} {Smed: dd_Smed_v6_8186_0_1, dd_Smed_v6_8186_0_1, [RH, Score=326, Expect=5e-112]} {RNA1509_2400} {RNA1310_20012} {RNA815_7964} |
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