Data search
Results for MligTC455_28311
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28311 | 1108 | 23.07 | Mlig455_056769 | Neo: Irradiation Age: logFC(26M/2M)=0.168 |
DRG1 | Mlig455_056769 {REF} {Length: 5905} {Pfam: C-terminal region of MMR_HSR1 domain [PF16897.7, score=136.4]; TGS domain [PF02824.23, score=84.8]; 50S ribosome-binding GTPase [PF01926.25, score=70.2]; Ferrous iron transport protein B [PF02421.20, score=41.6]} {Human: ENSG00000185721, DRG1, developmentally regulated GTP binding protein 1, [RH, Score=616, Expect=0.0]} {Mouse: ENSMUSG00000020457, Drg1, developmentally regulated GTP binding protein 1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0010339, 128up, upstream of RpIII128, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00012126, T28D6.6, [RH, Score=608, Expect=0.0]} {Smed: dd_Smed_v6_5779_0_1, dd_Smed_v6_5779_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_14341, RNA1509_14673, RNA1509_25066, RNA1509_33301} {RNA1310_570.1, RNA1509_14341, RNA1509_14673, RNA1509_25066} {RNA1509_14341, RNA1509_14673, RNA1509_25066, RNA815_134.1} |
Cumulative graph for MligTC455_28311
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.336 | 4.653 | 0.71531 | 1.00000 | |
| RegionR2 | -0.012 | 4.653 | 0.97782 | 1.00000 | |
| RegionR3 | -0.542 | 4.653 | 0.15224 | 0.66070 | |
| RegionR4 | 0.781 | 4.653 | 0.04486 | 0.17912 | |
| RegionR5 | 0.802 | 4.653 | 0.01006 | 0.05797 | |
| RegionR6 | 0.063 | 4.653 | 0.86048 | 1.00000 | |
| RegionR7 | -0.663 | 4.653 | 0.19556 | 0.80193 | |
| RegionR8 | -0.092 | 4.653 | 0.87643 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.002 | 4.653 | 0.99937 | 1.00000 | |
| RegenerationR2 | 0.376 | 4.653 | 0.30938 | 0.74978 | |
| RegenerationR3 | 0.83 | 4.653 | 0.04493 | 0.37016 | |
| RegenerationR4 | -0.122 | 4.653 | 0.75870 | 0.97233 | |
| RegenerationR5 | 0.021 | 4.653 | 0.95300 | 1.00000 | |
| RegenerationR6 | 0.403 | 4.653 | 0.31477 | 0.66207 | |
| RegenerationBL | 0.583 | 4.653 | 0.18950 | 0.52277 | |
| RegenerationTP | 0.648 | 4.653 | 0.20587 | 0.64794 |
Genes with expression patterns similar to MligTC455_28311
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28311 | 1108 | 23.07 | Mlig455_056769 | Neo: Irradiation Age: logFC(26M/2M)=0.168 |
DRG1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056769 {REF} {Length: 5905} {Pfam: C-terminal region of MMR_HSR1 domain [PF16897.7, score=136.4]; TGS domain [PF02824.23, score=84.8]; 50S ribosome-binding GTPase [PF01926.25, score=70.2]; Ferrous iron transport protein B [PF02421.20, score=41.6]} {Human: ENSG00000185721, DRG1, developmentally regulated GTP binding protein 1, [RH, Score=616, Expect=0.0]} {Mouse: ENSMUSG00000020457, Drg1, developmentally regulated GTP binding protein 1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0010339, 128up, upstream of RpIII128, [RH, Score=615, Expect=0.0]} {Celegans: WBGene00012126, T28D6.6, [RH, Score=608, Expect=0.0]} {Smed: dd_Smed_v6_5779_0_1, dd_Smed_v6_5779_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_14341, RNA1509_14673, RNA1509_25066, RNA1509_33301} {RNA1310_570.1, RNA1509_14341, RNA1509_14673, RNA1509_25066} {RNA1509_14341, RNA1509_14673, RNA1509_25066, RNA815_134.1} |
| 2. | MligTC455_25576 | 466 | 9.71 | Mlig455_024668 | Neo: - Age: Down-Up-Up |
ADCK1 | 2.473 | - | - | 0.966 | - | 0.701 | 0.806 | Mlig455_024668 {REF} {Length: 1971} {TRANSSPLICED} {Pfam: ABC1 atypical kinase-like domain [PF03109.18, score=252.7]; Protein kinase domain [PF00069.27, score=18.3]} {Human: ENSG00000063761, ADCK1, aarF domain containing kinase 1, [RH, Score=425, Expect=4e-144]} {Mouse: ENSMUSG00000021044, Adck1, aarF domain containing kinase 1, [RH, Score=419, Expect=5e-142]} {Dmel: FBgn0035039, Adck, aarF domain containing kinase, [RH, Score=387, Expect=8e-130]} {Celegans: WBGene00008410, D2023.6, [RH, Score=367, Expect=8e-122]} {Smed: dd_Smed_v6_14585_0_1, dd_Smed_v6_14585_0_1, [RH, Score=354, Expect=1e-116]} {RNA1509_42731} {RNA1310_8701, RNA1509_42731} {RNA1509_42731, RNA815_13502} |
| 3. | MligTC455_25577 | 442 | 9.2 | Mlig455_044046 | Neo: - Age: - |
EDC4 | 1.716 | - | - | 0.961 | - | - | 0.755 | Mlig455_044046 {REF} {Length: 7057} {TRANSSPLICED} {Pfam: WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=243.1]; TMEM192 family [PF14802.8, score=42.2]} {Human: ENSG00000038358, EDC4, enhancer of mRNA decapping 4, [RH, Score=190, Expect=5e-48]} {Mouse: ENSMUSG00000036270, Edc4, enhancer of mRNA decapping 4, [RH, Score=186, Expect=4e-47]} {Dmel: FBgn0283682, Ge-1, [RH, Score=159, Expect=6e-39]} {Smed: dd_Smed_v6_2416_0_1, dd_Smed_v6_2416_0_1, [RH, Score=226, Expect=4e-60]} {RNA1509_47327, RNA1509_5030} {RNA1310_1379.1, RNA1509_47327} {RNA1509_47327, RNA815_8608} |
| 4. | MligTC455_45698 | 585 | 12.18 | Mlig455_035368 | Neo: Neoblast Age: - |
1.667 | - | - | 0.957 | 0.710 | - | - | Mlig455_035368 {REF} {Length: 1975} {TRANSSPLICED} {RNA1509_32885} {RNA1310_36246.1, RNA1509_32885} {RNA1509_32885, RNA815_24121} | |
| 5. | MligTC455_53865 | 194 | 4.05 | Mlig455_063530 | Neo: - Age: - |
0.982 | - | - | - | - | 0.982 | - | Mlig455_063530 {REF} {Length: 8537} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=24.6]} {Mouse: ENSMUSG00000035517, Tdrd7, tudor domain containing 7, [RH, Score=67.0, Expect=5e-11]} {RNA1509_17754, RNA1509_29299} {RNA1310_1487, RNA1509_17754} {RNA1509_17754, RNA815_6982} | |
| 6. | MligTC455_32405 | 5821 | 121.27 | Mlig455_017238 | Neo: - Age: - |
PITPNA | 0.965 | - | - | - | 0.965 | - | - | Mlig455_017238 {REF} {Length: 1800} {Pfam: Phosphatidylinositol transfer protein [PF02121.20, score=378.2]} {Human: ENSG00000174238, PITPNA, phosphatidylinositol transfer protein alpha, [RH, Score=323, Expect=4e-111]; ENSG00000180957, PITPNB, phosphatidylinositol transfer protein beta, [RH, Score=310, Expect=6e-106]} {Mouse: ENSMUSG00000017781, Pitpna, phosphatidylinositol transfer protein, alpha, [RH, Score=320, Expect=2e-110]; ENSMUSG00000050017, Pitpnb, phosphatidylinositol transfer protein, beta, [RH, Score=307, Expect=3e-105]} {Dmel: FBgn0267975, vib, vibrator, [RH, Score=350, Expect=2e-122]} {Celegans: WBGene00021854, Y54F10AR.1, [RH, Score=315, Expect=1e-108]} {Smed: dd_Smed_v6_580_0_1, dd_Smed_v6_580_0_1, [RH, Score=383, Expect=2e-135]} {RNA1509_18588, RNA1509_29408, RNA1509_35403, RNA1509_52353} {RNA1310_20208, RNA1509_18588, RNA1509_29408, RNA1509_35403, RNA1509_52353} {RNA1509_18588, RNA1509_29408, RNA1509_35403, RNA1509_52353, RNA815_7237.2} |
| 7. | MligTC455_12179 | 1836 | 38.24 | Mlig455_022912, Mlig455_022921 | Neo: - Age: Up-Up-Down |
0.96 | - | - | 0.960 | - | - | - | Mlig455_022912 {REF} {Length: 4022} {TRANSSPLICED} {Pfam: PAN domain [PF00024.28, score=61.5]} {RNA1509_35320, RNA1509_963} {RNA1310_1843, RNA1509_35320, RNA1509_963} {RNA1509_35320, RNA1509_963, RNA815_613.1} Mlig455_022921 {REF} {Length: 4010} {TRANSSPLICED} {Pfam: PAN domain [PF00024.28, score=60.5]} {RNA1509_963} {RNA1310_1843} {RNA815_613.1} |
|
| 8. | MligTC455_17917 | 99 | 2.06 | Mlig455_045353 | Neo: - Age: - |
QTRT2 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_045353 {REF} {Length: 5066} {Pfam: Queuine tRNA-ribosyltransferase [PF01702.20, score=162.0]} {Human: ENSG00000151576, QTRT2, queuine tRNA-ribosyltransferase accessory subunit 2, [RH, Score=122, Expect=3e-30]} {Dmel: FBgn0036000, CG3434, [RH, Score=102, Expect=9e-24]} {Celegans: WBGene00006567, tgt-2, Queuine tRNA-ribosyltransferase accessory subunit 2, [RH, Score=101, Expect=1e-23]} {Smed: dd_Smed_v6_14819_0_1, dd_Smed_v6_14819_0_1, [RH, Score=120, Expect=3e-30]} {RNA1509_44219} {RNA1310_13396, RNA1509_44219} {RNA1509_44219, RNA815_59864} |
| 9. | MligTC455_54175 | 1327 | 27.64 | Mlig455_059834 | Neo: Irradiation Age: Up-Down-Down Region-specific R4: 3.028 Region-enriched R4: 2.007/0.00106 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_059834 {REF} {Length: 3215} {Pfam: Universal stress protein family [PF00582.28, score=83.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=131, Expect=3e-39]} {RNA1509_12684, RNA1509_41734} {RNA1310_5062.1, RNA1509_12684, RNA1509_41734} {RNA1509_12684, RNA1509_41734, RNA815_2234.1} | |
| 10. | MligTC455_54246 | 431 | 8.98 | Mlig455_052275 | Neo: Int S/G2/M Age: Down-Down-Up Region-enriched R5: 1.014/0.02077 |
COPZ1 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_052275 {REF} {Length: 3921} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=76.9]} {Human: ENSG00000111481, COPZ1, coatomer protein complex subunit zeta 1, [Score=164, Expect=2e-51]; ENSG00000005243, COPZ2, coatomer protein complex subunit zeta 2, [Score=157, Expect=3e-48]} {Mouse: ENSMUSG00000060992, Copz1, coatomer protein complex, subunit zeta 1, [Score=164, Expect=2e-51]; ENSMUSG00000018672, Copz2, coatomer protein complex, subunit zeta 2, [Score=161, Expect=4e-50]} {Dmel: FBgn0040512, zetaCOP, Coat Protein (coatomer) zeta, [Score=159, Expect=8e-50]} {Celegans: WBGene00010333, copz-1, Probable coatomer subunit zeta, [Score=184, Expect=6e-60]} {Smed: dd_Smed_v6_1448_0_1, dd_Smed_v6_1448_0_1, [Score=147, Expect=3e-45]} {RNA1509_17706} {RNA1310_43456} {RNA815_21162.1} |
| 11. | MligTC455_06262 | 478 | 9.95 | Mlig455_003942 | Neo: - Age: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_003942 {REF} {Length: 1205} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08241.14, score=26.0]} {Smed: dd_Smed_v6_3714_0_1, dd_Smed_v6_3714_0_1, [Score=76.3, Expect=2e-16]} {RNA1509_23823} {RNA1310_16396.1} {RNA815_10422} | |
| 12. | MligTC455_22380 | 1009 | 21.03 | Mlig455_004274, Mlig455_004359 | Neo: Int S/G2/M Age: - |
CDK9 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_004274 {REF} {Length: 3137} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=23.9} {Pfam: Protein kinase domain [PF00069.27, score=230.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.7]; Kinase-like [PF14531.8, score=21.7]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.0]; ABC1 atypical kinase-like domain [PF03109.18, score=20.6]} {Human: ENSG00000136807, CDK9, cyclin dependent kinase 9, [RH, Score=391, Expect=1e-133]} {Mouse: ENSMUSG00000009555, Cdk9, cyclin-dependent kinase 9 (CDC2-related kinase), [RH, Score=390, Expect=2e-133]} {Dmel: FBgn0019949, Cdk9, Cyclin-dependent kinase 9, [RH, Score=390, Expect=6e-133]} {Celegans: WBGene00000410, cdk-9, Probable cyclin-dependent kinase 9, [RH, Score=321, Expect=3e-105]} {Smed: dd_Smed_v6_8520_0_1, dd_Smed_v6_8520_0_1, [RH, Score=333, Expect=4e-111]} {RNA1509_13492} {RNA1310_7809.1} {RNA815_9626} Mlig455_004359 {REF} {Length: 2701} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=110.7]; Kinase-like [PF14531.8, score=21.7]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.0]; ABC1 atypical kinase-like domain [PF03109.18, score=20.6]} {Human: ENSG00000136807, CDK9, cyclin dependent kinase 9, [RH, Score=391, Expect=1e-133]} {Mouse: ENSMUSG00000009555, Cdk9, cyclin-dependent kinase 9 (CDC2-related kinase), [RH, Score=390, Expect=2e-133]} {Dmel: FBgn0019949, Cdk9, Cyclin-dependent kinase 9, [RH, Score=390, Expect=5e-133]} {Celegans: WBGene00000410, cdk-9, Probable cyclin-dependent kinase 9, [RH, Score=321, Expect=3e-105]} {Smed: dd_Smed_v6_8520_0_1, dd_Smed_v6_8520_0_1, [RH, Score=333, Expect=3e-111]} {RNA1509_13492} {RNA1310_7809.1, RNA1509_13492} {RNA1509_13492, RNA815_9626} |
| 13. | MligTC455_42629 | 1377 | 28.68 | Mlig455_034953 | Neo: - Age: logFC(26M/2M)=0.201 |
ZFYVE28 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_034953 {REF} {Length: 4619} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=59.0]} {Human: ENSG00000159733, ZFYVE28, zinc finger FYVE-type containing 28, [RH, Score=235, Expect=3e-68]} {Mouse: ENSMUSG00000037224, Zfyve28, zinc finger, FYVE domain containing 28, [RH, Score=235, Expect=3e-68]} {Dmel: FBgn0039492, CG6051, [RH, Score=216, Expect=3e-61]} {Celegans: WBGene00003084, lst-2, Lateral signaling target protein 2, [RH, Score=213, Expect=1e-61]} {Smed: dd_Smed_v6_5416_0_1, dd_Smed_v6_5416_0_1, [RH, Score=108, Expect=3e-25]} {RNA1509_27463, RNA1509_30283, RNA1509_30718, RNA1509_38450, RNA1509_52020, RNA1509_7222} {RNA1310_9487.1, RNA1509_27463, RNA1509_30283, RNA1509_30718, RNA1509_38450, RNA1509_52020, RNA1509_7222} {RNA1509_27463, RNA1509_30283, RNA1509_30718, RNA1509_38450, RNA1509_52020, RNA1509_7222, RNA815_5026.1} |
| 14. | MligTC455_46991 | 4686 | 97.63 | Mlig455_022426 | Neo: - Age: logFC(26M/2M)=0.290 |
NDUFA9 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_022426 {REF} {Length: 1638} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=39.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=32.2]; NmrA-like family [PF05368.15, score=27.3]; NAD(P)H-binding [PF13460.8, score=23.5]; RmlD substrate binding domain [PF04321.19, score=21.1]} {Human: ENSG00000139180, NDUFA9, NADH:ubiquinone oxidoreductase subunit A9, [RH, Score=283, Expect=4e-92]} {Mouse: ENSMUSG00000000399, Ndufa9, NADH:ubiquinone oxidoreductase subunit A9, [RH, Score=266, Expect=1e-85]} {Dmel: FBgn0037001, ND-39, NADH dehydrogenase (ubiquinone) 39 kDa subunit, [RH, Score=343, Expect=3e-115]} {Celegans: WBGene00021800, Y53G8AL.2, [RH, Score=271, Expect=6e-87]} {Smed: dd_Smed_v6_1524_0_1, dd_Smed_v6_1524_0_1, [RH, Score=376, Expect=2e-128]} {RNA1509_19609, RNA1509_2137, RNA1509_6100} {RNA1310_20129.1, RNA1509_19609, RNA1509_6100} {RNA1509_19609, RNA1509_6100, RNA815_7840.1} |
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