Data search
Results for MligTC455_42641
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42641 | 312 | 6.50 | Mlig455_030153 | Neo: Irradiation Age: - Region-enriched R4: 2.057/0.01945 |
FBXL6 | Mlig455_030153 {REF} {Length: 2171} {TRANSSPLICED} {Human: ENSG00000285442, FBXL6, F-box and leucine rich repeat protein 6, [Score=51.2, Expect=3e-06]; ENSG00000182325, FBXL6, F-box and leucine rich repeat protein 6, [Score=51.2, Expect=3e-06]} {Mouse: ENSMUSG00000022559, Fbxl6, F-box and leucine-rich repeat protein 6, [Score=52.8, Expect=8e-07]} {RNA1509_8614} {RNA1310_11540, RNA1509_8614} {RNA1509_8614, RNA815_3767} |
Cumulative graph for MligTC455_42641
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.112 | 3.403 | 0.94236 | 1.00000 | |
| RegionR2 | -0.665 | 3.403 | 0.37671 | 0.77152 | |
| RegionR3 | -1.071 | 3.403 | 0.09101 | 0.53238 | |
| RegionR4 | 2.057 | 3.403 | 0.00223 | 0.01945 | |
| RegionR5 | 0.229 | 3.403 | 0.65036 | 1.00000 | |
| RegionR6 | -0.413 | 3.403 | 0.48091 | 1.00000 | |
| RegionR7 | 0.637 | 3.403 | 0.34794 | 0.98525 | |
| RegionR8 | -0.886 | 3.403 | 0.40933 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.137 | 3.403 | 0.23891 | 0.96582 | |
| RegenerationR2 | 0.63 | 3.403 | 0.28307 | 0.72626 | |
| RegenerationR3 | 0.401 | 3.403 | 0.56729 | 0.89262 | |
| RegenerationR4 | -1.558 | 3.403 | 0.01891 | 0.21551 | |
| RegenerationR5 | -0.08 | 3.403 | 0.88744 | 1.00000 | |
| RegenerationR6 | 0.492 | 3.403 | 0.44976 | 0.77033 | |
| RegenerationBL | -1.706 | 3.403 | 0.12112 | 0.41290 | |
| RegenerationTP | -1.532 | 3.403 | 0.14579 | 0.56861 |
Genes with expression patterns similar to MligTC455_42641
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42641 | 312 | 6.5 | Mlig455_030153 | Neo: Irradiation Age: - Region-enriched R4: 2.057/0.01945 |
FBXL6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_030153 {REF} {Length: 2171} {TRANSSPLICED} {Human: ENSG00000285442, FBXL6, F-box and leucine rich repeat protein 6, [Score=51.2, Expect=3e-06]; ENSG00000182325, FBXL6, F-box and leucine rich repeat protein 6, [Score=51.2, Expect=3e-06]} {Mouse: ENSMUSG00000022559, Fbxl6, F-box and leucine-rich repeat protein 6, [Score=52.8, Expect=8e-07]} {RNA1509_8614} {RNA1310_11540, RNA1509_8614} {RNA1509_8614, RNA815_3767} |
| 2. | MligTC455_43702 | 231 | 4.82 | Mlig455_023865 | Neo: Irradiation Age: - |
SLIT1 | 1.785 | - | - | - | 0.834 | - | 0.951 | Mlig455_023865 {REF} {Length: 4963} {Pfam: Leucine rich repeat [PF13855.8, score=60.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=29.2]; Leucine Rich Repeat [PF00560.35, score=25.9]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=84.7, Expect=6e-17]} {Mouse: ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=80.5, Expect=3e-15]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=78.6, Expect=1e-14]} {Dmel: FBgn0034083, lbk, lambik, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_9128_0_1, dd_Smed_v6_9128_0_1, [RH, Score=134, Expect=1e-33]} {RNA1509_13979, RNA1509_41843, RNA1509_57264} {RNA1310_10154.1, RNA1509_41843, RNA1509_57264} {RNA1509_41843, RNA1509_57264, RNA815_4611} |
| 3. | MligTC455_43580 | 416 | 8.66 | Mlig455_058560 | Neo: - Age: - Region-enriched R4: 3.115/0.00016 |
UBXN6 | 1.752 | - | 0.801 | - | 0.951 | - | - | Mlig455_058560 {REF} {Length: 2769} {TRANSSPLICED} {Pfam: PUB domain [PF09409.12, score=78.3]; UBX domain [PF00789.22, score=31.0]} {Human: ENSG00000167671, UBXN6, UBX domain protein 6, [RH, Score=190, Expect=4e-55]} {Mouse: ENSMUSG00000019578, Ubxn6, UBX domain protein 6, [RH, Score=191, Expect=1e-55]} {Dmel: FBgn0034372, Gint3, GDI interacting protein 3, [RH, Score=201, Expect=2e-59]} {Celegans: WBGene00019163, ubxn-6, UBX-containing protein in Nematodes, [RH, Score=144, Expect=3e-38]} {Smed: dd_Smed_v6_4652_0_1, dd_Smed_v6_4652_0_1, [RH, Score=160, Expect=2e-44]} {RNA1509_28751, RNA1509_34942, RNA1509_57494, RNA1509_59796} {RNA1310_19219, RNA1509_28751, RNA1509_34942, RNA1509_57494, RNA1509_59796} {RNA1509_28751, RNA1509_34942, RNA1509_57494, RNA1509_59796, RNA815_18642.1} |
| 4. | MligTC455_27764 | 841 | 17.53 | Mlig455_004966 | Neo: - Age: Up-Up-Down |
USP24 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_004966 {REF} {Length: 8485} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=146.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=62.6]} {Human: ENSG00000162402, USP24, ubiquitin specific peptidase 24, [Score=386, Expect=2e-107]} {Mouse: ENSMUSG00000028514, Usp24, ubiquitin specific peptidase 24, [Score=385, Expect=2e-107]} {Dmel: FBgn0005632, faf, fat facets, [Score=261, Expect=2e-69]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=193, Expect=8e-49]} {Smed: dd_Smed_v6_2963_0_1, dd_Smed_v6_2963_0_1, [Score=240, Expect=2e-63]} {RNA1509_2363} {RNA1310_218.1, RNA1509_2363} {RNA1509_2363, RNA815_823} |
| 5. | MligTC455_35525 | 634 | 13.2 | Mlig455_051182 | Neo: - Age: Down-Down-Up |
TMEM9 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_051182 {REF} {Length: 2979} {TRANSSPLICED} {Pfam: TMEM9 [PF05434.13, score=116.2]} {Human: ENSG00000116857, TMEM9, transmembrane protein 9, [RH, Score=100, Expect=3e-26]} {Mouse: ENSMUSG00000026411, Tmem9, transmembrane protein 9, [RH, Score=106, Expect=2e-28]} {Dmel: FBgn0037313, CG1161, [RH, Score=55.5, Expect=3e-09]} {Smed: dd_Smed_v6_2294_0_1, dd_Smed_v6_2294_0_1, [Score=77.8, Expect=2e-17]} {RNA1509_15933, RNA1509_21883, RNA1509_45739} {RNA1310_15065, RNA1509_15933, RNA1509_21883, RNA1509_45739} {RNA1509_15933, RNA1509_21883, RNA1509_45739, RNA815_20516} |
| 6. | MligTC455_26373 | 192 | 4 | Mlig455_026052 | Neo: - Age: - |
RNPC3 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_026052 {REF} {Length: 1639} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.8]; RRM-like domain [PF11835.10, score=19.7]} {Human: ENSG00000185946, RNPC3, RNA binding region (RNP1, RRM) containing 3, [RH, Score=80.1, Expect=2e-15]} {Mouse: ENSMUSG00000027981, Rnpc3, RNA-binding region (RNP1, RRM) containing 3, [RH, Score=82.4, Expect=2e-16]} {Dmel: FBgn0265184, CG44249, [RH, Score=76.3, Expect=1e-14]} {Smed: dd_Smed_v6_13366_0_2, dd_Smed_v6_13366_0_2, [RH, Score=60.8, Expect=8e-10]} {RNA1310_16484.1} {RNA815_22075} |
| 7. | MligTC455_39018 | 632 | 13.17 | Mlig455_040178 | Neo: - Age: - |
TCEA2 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_040178 {REF} {Length: 1711} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=114.4]; Transcription factor S-II (TFIIS) [PF01096.20, score=70.2]; TFIIS helical bundle-like domain [PF08711.13, score=34.0]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [RH, Score=258, Expect=1e-84]; ENSG00000187735, TCEA1, transcription elongation factor A1, [RH, Score=252, Expect=2e-82]} {Mouse: ENSMUSG00000033813, Tcea1, transcription elongation factor A (SII) 1, [RH, Score=247, Expect=2e-80]; ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [RH, Score=246, Expect=4e-80]; ENSMUSG00000001604, Tcea3, transcription elongation factor A (SII), 3, [RH, Score=240, Expect=3e-77]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [RH, Score=246, Expect=6e-80]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [RH, Score=212, Expect=6e-67]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [RH, Score=254, Expect=3e-83]} {RNA1509_46586, RNA1509_7459} {RNA1310_7696, RNA1509_46586} {RNA1509_46586, RNA815_8604} |
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