TomoSeq data search

Data search

Results for MligTC455_42660

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42660

443

9.23

Mlig455_017230

Neo: -

Age: logFC(26M/2M)=0.453

Mlig455_017230 {REF} {Length: 1949} {RNA1509_18178} {RNA1310_33346, RNA1509_18178} {RNA1509_18178, RNA815_55939}

Cumulative graph for MligTC455_42660

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.049	3.705	0.57375	1.00000
RegionR2	-0.502	3.705	0.42819	0.81865
RegionR3	-0.415	3.705	0.45754	0.96759
RegionR4	1.536	3.705	0.00863	0.05462
RegionR5	0.884	3.705	0.04542	0.17488
RegionR6	0.159	3.705	0.74961	1.00000
RegionR7	0.576	3.705	0.34388	0.98105
RegionR8	-1.189	3.705	0.24332	0.85996

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.703	3.705	0.32997	1.00000
RegenerationR2	0.08	3.705	0.86017	1.00000
RegenerationR3	-0.312	3.705	0.55237	0.88519
RegenerationR4	-0.747	3.705	0.14990	0.57780
RegenerationR5	-0.444	3.705	0.32330	0.74587
RegenerationR6	-0.25	3.705	0.62109	0.88149
RegenerationBL	0.541	3.705	0.37189	0.74010
RegenerationTP	-0.061	3.705	0.94198	1.00000

Genes with expression patterns similar to MligTC455_42660

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42660	443	9.23	Mlig455_017230	Neo: - Age: logFC(26M/2M)=0.453		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017230 {REF} {Length: 1949} {RNA1509_18178} {RNA1310_33346, RNA1509_18178} {RNA1509_18178, RNA815_55939}
2.	MligTC455_47150	1035	21.57	Mlig455_015744, Mlig455_049450	Neo: - Age: - Region-enriched R5: 1.513/0.00315	MFSD9	1.764	-	-	-	0.950	-	0.814	Mlig455_015744 {REF} {Length: 1507} {Pfam: Major Facilitator Superfamily [PF07690.18, score=41.2]} {Human: ENSG00000135953, MFSD9, major facilitator superfamily domain containing 9, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000041945, Mfsd9, major facilitator superfamily domain containing 9, [Score=90.1, Expect=3e-19]} {Smed: dd_Smed_v6_9599_0_1, dd_Smed_v6_9599_0_1, [Score=145, Expect=2e-39]} {RNA1509_53696} {RNA1310_20924} {RNA815_32582} Mlig455_049450 {REF} {Length: 2590} {Pfam: Major Facilitator Superfamily [PF07690.18, score=50.6]} {Human: ENSG00000135953, MFSD9, major facilitator superfamily domain containing 9, [RH, Score=109, Expect=4e-25]} {Mouse: ENSMUSG00000041945, Mfsd9, major facilitator superfamily domain containing 9, [RH, Score=121, Expect=2e-29]} {Smed: dd_Smed_v6_9599_0_1, dd_Smed_v6_9599_0_1, [RH, Score=183, Expect=1e-52]} {RNA1509_53696} {RNA1310_20924} {RNA815_32582}
3.	MligTC455_20065	1482	30.87	Mlig455_000221, Mlig455_058479	Neo: - Age: Down-Up-Up	PIGW	1.697	-	-	-	0.967	-	0.730	Mlig455_000221 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: GWT1 [PF06423.14, score=72.6]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=100, Expect=1e-21]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=115, Expect=4e-27]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=106, Expect=5e-24]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=120, Expect=6e-29]} {RNA1509_19464, RNA1509_29630} {RNA1310_6153, RNA1509_19464, RNA1509_29630} {RNA1509_19464, RNA1509_29630, RNA815_7740} Mlig455_058479 {REF} {Length: 2310} {Pfam: GWT1 [PF06423.14, score=70.1]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=113, Expect=2e-26]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=102, Expect=6e-23]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=119, Expect=1e-28]} {RNA1509_19464} {RNA1310_6153} {RNA815_7740}
4.	MligTC455_13855	1047	21.81	Mlig455_054846	Neo: - Age: -	SACM1L	0.964	-	-	-	0.964	-	-	Mlig455_054846 {REF} {Length: 2878} {Pfam: SacI homology domain [PF02383.20, score=265.8]} {Human: ENSG00000211456, SACM1L, SAC1 like phosphatidylinositide phosphatase, [Score=458, Expect=3e-154]} {Mouse: ENSMUSG00000025240, Sacm1l, SAC1 suppressor of actin mutations 1-like (yeast), [Score=458, Expect=1e-154]} {Dmel: FBgn0283500, Sac1, Sac1 phosphatase, [RH, Score=433, Expect=9e-145]} {Celegans: WBGene00009264, sac-1, SAC1 PIP phosphatase (Yeast Suppressor of ACtin) homolog, [RH, Score=413, Expect=4e-137]} {Smed: dd_Smed_v6_3882_0_1, dd_Smed_v6_3882_0_1, [Score=421, Expect=3e-140]} {RNA1509_12946, RNA1509_25363} {RNA1310_6188.1, RNA1509_12946, RNA1509_25363} {RNA1509_12946, RNA1509_25363, RNA815_2277.1}
5.	MligTC455_17062	1374	28.62	Mlig455_058341	Neo: Int S/G2/M Age: -	ALKBH4	0.963	-	-	-	0.963	-	-	Mlig455_058341 {REF} {Length: 1506} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF03171.22, score=27.6]; 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=24.8]} {Human: ENSG00000160993, ALKBH4, alkB homolog 4, lysine demethylase, [RH, Score=191, Expect=9e-59]} {Mouse: ENSMUSG00000039754, Alkbh4, alkB homolog 4, lysine demethylase, [RH, Score=202, Expect=2e-63]} {Dmel: FBgn0032149, CG4036, [RH, Score=179, Expect=2e-54]} {Celegans: WBGene00017304, F09F7.7, DNA N6-methyl adenine demethylase, [RH, Score=182, Expect=4e-56]} {Smed: dd_Smed_v6_4775_0_1, dd_Smed_v6_4775_0_1, [RH, Score=189, Expect=6e-59]} {RNA1509_50359, RNA1509_5872} {RNA1310_21157.1, RNA1509_50359, RNA1509_5872} {RNA1509_50359, RNA1509_5872, RNA815_8828.1}
6.	MligTC455_44696	430	8.97	Mlig455_040286	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.519/0.00428	METTL14	0.957	-	-	-	-	-	0.957	Mlig455_040286 {REF} {Length: 1914} {TRANSSPLICED} {Pfam: MT-A70 [PF05063.16, score=176.6]} {Human: ENSG00000145388, METTL14, methyltransferase like 14, [RH, Score=427, Expect=6e-145]} {Mouse: ENSMUSG00000028114, Mettl14, methyltransferase like 14, [RH, Score=425, Expect=3e-144]} {Dmel: FBgn0032016, Mettl14, Methyltransferase like 14, [RH, Score=414, Expect=7e-141]} {Smed: dd_Smed_v6_6641_0_1, dd_Smed_v6_6641_0_1, [RH, Score=480, Expect=4e-165]} {RNA1509_14222} {RNA1310_14585, RNA1509_14222} {RNA1509_14222, RNA815_3196.1}
7.	MligTC455_43606	1674	34.88	Mlig455_007946, Mlig455_008046, Mlig455_008088	Neo: - Age: - Region-enriched R5: 1.300/0.00098	HNRNPR, SYNCRIP	0.956	-	-	-	-	-	0.956	Mlig455_007946 {REF} {Length: 2555} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.0]; LisH [PF08513.13, score=29.4]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=225, Expect=3e-64]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=226, Expect=1e-64]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=1e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=239, Expect=7e-70]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=7e-58]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=134, Expect=2e-32]} {RNA1509_26124} {RNA1310_13847.3} {RNA815_19802} Mlig455_008046 {REF} {Length: 2528} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=91.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.0]; LisH [PF08513.13, score=29.4]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=225, Expect=3e-64]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=9e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=226, Expect=1e-64]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=1e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=239, Expect=7e-70]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=7e-58]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=134, Expect=2e-32]} {RNA1509_26124} {RNA1310_13847.3} {RNA815_19802} Mlig455_008088 {REF} {Length: 2551} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=88.6]; CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=69.5]; LisH [PF08513.13, score=29.5]} {Human: ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=8e-63]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=223, Expect=8e-63]; ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=223, Expect=2e-63]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=224, Expect=2e-63]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=222, Expect=2e-62]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=237, Expect=2e-69]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=207, Expect=1e-57]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=132, Expect=7e-32]} {RNA1509_26124, RNA1509_26907} {RNA1310_13847.3, RNA1509_26124, RNA1509_26907} {RNA1509_26124, RNA1509_26907, RNA815_19802}
8.	MligTC455_44061	1563	32.56	Mlig455_020150	Neo: Int S/G2/M Age: logFC(26M/2M)=0.326	RBM15B	0.952	-	-	-	0.952	-	-	Mlig455_020150 {REF} {Length: 2624} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=69.0]; SPOC domain [PF07744.15, score=50.6]; RNA recognition motif [PF16367.7, score=25.8]} {Human: ENSG00000259956, RBM15B, RNA binding motif protein 15B, [RH, Score=146, Expect=1e-35]; ENSG00000162775, RBM15, RNA binding motif protein 15, [RH, Score=142, Expect=3e-34]} {Mouse: ENSMUSG00000074102, Rbm15b, RNA binding motif protein 15B, [RH, Score=147, Expect=6e-36]; ENSMUSG00000048109, Rbm15, RNA binding motif protein 15, [RH, Score=142, Expect=2e-34]} {Dmel: FBgn0027548, nito, spenito, [RH, Score=151, Expect=2e-37]} {Celegans: WBGene00017929, grld-1, Glutamate Receptor Level Decreased, [RH, Score=142, Expect=3e-36]} {Smed: dd_Smed_v6_7282_0_1, dd_Smed_v6_7282_0_1, [RH, Score=223, Expect=2e-63]} {RNA1509_27794, RNA1509_34223, RNA1509_60106, RNA1509_6733} {RNA1310_8176.1, RNA1509_27794, RNA1509_34223, RNA1509_60106, RNA1509_6733} {RNA1509_27794, RNA1509_34223, RNA1509_60106, RNA1509_6733, RNA815_25048}
9.	MligTC455_50992	685	14.28	Mlig455_001035	Neo: Int S/G2/M Age: - Region-enriched R5: 1.678/0.00691	MTR	0.951	-	-	-	-	-	0.951	Mlig455_001035 {REF} {Length: 2077} {TRANSSPLICED} {Pfam: Homocysteine S-methyltransferase [PF02574.18, score=221.6]} {Human: ENSG00000116984, MTR, 5-methyltetrahydrofolate-homocysteine methyltransferase, [Score=70.1, Expect=1e-12]} {Mouse: ENSMUSG00000021311, Mtr, 5-methyltetrahydrofolate-homocysteine methyltransferase, [Score=62.4, Expect=3e-10]} {Dmel: FBgn0032727, CG10623, [RH, Score=179, Expect=5e-54]} {Celegans: WBGene00010988, metr-1, Probable methionine synthase, [Score=73.9, Expect=2e-14]} {Smed: dd_Smed_v6_9368_0_1, dd_Smed_v6_9368_0_1, [RH, Score=162, Expect=8e-48]} {RNA1509_52648} {RNA1310_5684} {RNA815_12672}

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