Data search
Results for MligTC455_42769
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_42769 | 800 | 16.66 | Mlig455_004685, Mlig455_004745, Mlig455_004846 | Neo: - Age: logFC(26M/2M)=0.499 Region-enriched R4: 2.740/0.00419 |
CSTF1 | Mlig455_004685 {REF} {Length: 1636} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=106.2]; Cleavage stimulation factor subunit 1, dimerisation domain [PF16699.7, score=78.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.1]} {Human: ENSG00000101138, CSTF1, cleavage stimulation factor subunit 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000027498, Cstf1, cleavage stimulation factor, 3' pre-RNA, subunit 1, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0039867, CstF50, Cleavage stimulation factor 50 kD subunit, [RH, Score=444, Expect=7e-155]} {Celegans: WBGene00000773, cpf-1, Cleavage and Polyadenylation Factor, [RH, Score=444, Expect=1e-154]} {Smed: dd_Smed_v6_6400_0_1, dd_Smed_v6_6400_0_1, [RH, Score=517, Expect=0.0]} {RNA1509_37040} {RNA1310_8078, RNA1509_37040} {RNA1509_37040, RNA815_2663} Mlig455_004745 {REF} {Length: 1633} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=106.2]; Cleavage stimulation factor subunit 1, dimerisation domain [PF16699.7, score=78.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.1]} {Human: ENSG00000101138, CSTF1, cleavage stimulation factor subunit 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000027498, Cstf1, cleavage stimulation factor, 3' pre-RNA, subunit 1, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0039867, CstF50, Cleavage stimulation factor 50 kD subunit, [RH, Score=444, Expect=7e-155]} {Celegans: WBGene00000773, cpf-1, Cleavage and Polyadenylation Factor, [RH, Score=444, Expect=1e-154]} {Smed: dd_Smed_v6_6400_0_1, dd_Smed_v6_6400_0_1, [RH, Score=517, Expect=0.0]} {RNA1509_37040} {RNA1310_8078} {RNA815_2663} Mlig455_004846 {REF} {Length: 1632} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=106.2]; Cleavage stimulation factor subunit 1, dimerisation domain [PF16699.7, score=78.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.1]} {Human: ENSG00000101138, CSTF1, cleavage stimulation factor subunit 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000027498, Cstf1, cleavage stimulation factor, 3' pre-RNA, subunit 1, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0039867, CstF50, Cleavage stimulation factor 50 kD subunit, [RH, Score=444, Expect=7e-155]} {Celegans: WBGene00000773, cpf-1, Cleavage and Polyadenylation Factor, [RH, Score=444, Expect=1e-154]} {Smed: dd_Smed_v6_6400_0_1, dd_Smed_v6_6400_0_1, [RH, Score=517, Expect=0.0]} {RNA1509_37040} {RNA1310_8078} {RNA815_2663} |
Cumulative graph for MligTC455_42769
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.28 | 4.396 | 0.09984 | 0.66695 | |
| RegionR2 | -0.374 | 4.396 | 0.93788 | 1.00000 | |
| RegionR3 | 0.647 | 4.396 | 0.46265 | 0.97193 | |
| RegionR4 | 2.74 | 4.396 | 0.00032 | 0.00419 | |
| RegionR5 | 1.833 | 4.396 | 0.00385 | 0.02851 | |
| RegionR6 | 1.068 | 4.396 | 0.18094 | 0.74482 | |
| RegionR7 | 0.656 | 4.396 | 0.50086 | 1.00000 | |
| RegionR8 | -0.29 | 4.396 | 0.92497 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.119 | 4.396 | 0.33203 | 1.00000 | |
| RegenerationR2 | 0.388 | 4.396 | 0.47096 | 0.85817 | |
| RegenerationR3 | 0.13 | 4.396 | 0.82559 | 0.98973 | |
| RegenerationR4 | -0.168 | 4.396 | 0.77747 | 0.97963 | |
| RegenerationR5 | 0.102 | 4.396 | 0.84649 | 1.00000 | |
| RegenerationR6 | 1.094 | 4.396 | 0.04997 | 0.27955 | |
| RegenerationBL | 1.319 | 4.396 | 0.01955 | 0.15084 | |
| RegenerationTP | 1.045 | 4.396 | 0.12165 | 0.53052 |
Genes with expression patterns similar to MligTC455_42769
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_42769 | 800 | 16.66 | Mlig455_004685, Mlig455_004745, Mlig455_004846 | Neo: - Age: logFC(26M/2M)=0.499 Region-enriched R4: 2.740/0.00419 |
CSTF1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_004685 {REF} {Length: 1636} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=106.2]; Cleavage stimulation factor subunit 1, dimerisation domain [PF16699.7, score=78.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.1]} {Human: ENSG00000101138, CSTF1, cleavage stimulation factor subunit 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000027498, Cstf1, cleavage stimulation factor, 3' pre-RNA, subunit 1, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0039867, CstF50, Cleavage stimulation factor 50 kD subunit, [RH, Score=444, Expect=7e-155]} {Celegans: WBGene00000773, cpf-1, Cleavage and Polyadenylation Factor, [RH, Score=444, Expect=1e-154]} {Smed: dd_Smed_v6_6400_0_1, dd_Smed_v6_6400_0_1, [RH, Score=517, Expect=0.0]} {RNA1509_37040} {RNA1310_8078, RNA1509_37040} {RNA1509_37040, RNA815_2663} Mlig455_004745 {REF} {Length: 1633} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=106.2]; Cleavage stimulation factor subunit 1, dimerisation domain [PF16699.7, score=78.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.1]} {Human: ENSG00000101138, CSTF1, cleavage stimulation factor subunit 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000027498, Cstf1, cleavage stimulation factor, 3' pre-RNA, subunit 1, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0039867, CstF50, Cleavage stimulation factor 50 kD subunit, [RH, Score=444, Expect=7e-155]} {Celegans: WBGene00000773, cpf-1, Cleavage and Polyadenylation Factor, [RH, Score=444, Expect=1e-154]} {Smed: dd_Smed_v6_6400_0_1, dd_Smed_v6_6400_0_1, [RH, Score=517, Expect=0.0]} {RNA1509_37040} {RNA1310_8078} {RNA815_2663} Mlig455_004846 {REF} {Length: 1632} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=106.2]; Cleavage stimulation factor subunit 1, dimerisation domain [PF16699.7, score=78.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.1]} {Human: ENSG00000101138, CSTF1, cleavage stimulation factor subunit 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000027498, Cstf1, cleavage stimulation factor, 3' pre-RNA, subunit 1, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0039867, CstF50, Cleavage stimulation factor 50 kD subunit, [RH, Score=444, Expect=7e-155]} {Celegans: WBGene00000773, cpf-1, Cleavage and Polyadenylation Factor, [RH, Score=444, Expect=1e-154]} {Smed: dd_Smed_v6_6400_0_1, dd_Smed_v6_6400_0_1, [RH, Score=517, Expect=0.0]} {RNA1509_37040} {RNA1310_8078} {RNA815_2663} |
| 2. | MligTC455_10531 | 1991 | 41.48 | Mlig455_048117 | Neo: Neoblast, stringent Age: - Regeneration-upregulated BL: 1.505 Regeneration-enriched BL: 1.505 |
ANP32B | 0.967 | - | - | - | - | 0.967 | - | Mlig455_048117 {REF} {Length: 1650} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=64.4]; Leucine-rich repeat [PF14580.8, score=53.9]; Leucine rich repeat [PF13855.8, score=40.5]; Leucine Rich repeat [PF13516.8, score=21.3]} {Human: ENSG00000136938, ANP32B, acidic nuclear phosphoprotein 32 family member B, [RH, Score=146, Expect=4e-42]; ENSG00000143401, ANP32E, acidic nuclear phosphoprotein 32 family member E, [RH, Score=143, Expect=1e-40]; ENSG00000140350, ANP32A, acidic nuclear phosphoprotein 32 family member A, [RH, Score=139, Expect=3e-39]} {Mouse: ENSMUSG00000028333, Anp32b, acidic (leucine-rich) nuclear phosphoprotein 32 family, member B, [RH, Score=150, Expect=2e-43]} {Dmel: FBgn0034282, Mapmodulin, [RH, Score=187, Expect=4e-58]} {Celegans: WBGene00009367, F33H2.3, Acidic leucine-rich nuclear phosphoprotein 32-related protein 1, [RH, Score=95.1, Expect=3e-23]} {Smed: dd_Smed_v6_5176_0_1, dd_Smed_v6_5176_0_1, [RH, Score=157, Expect=1e-45]} {RNA1509_21879, RNA1509_27255, RNA1509_47497, RNA1509_5598} {RNA1310_24757, RNA1509_21879, RNA1509_27255, RNA1509_47497, RNA1509_5598} {RNA1509_21879, RNA1509_27255, RNA1509_47497, RNA1509_5598, RNA815_5320} |
| 3. | MligTC455_36414 | 939 | 19.56 | Mlig455_046069, Mlig455_046076 | Neo: - |
DDX10 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_046069 {REF} {Length: 2433} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=84.3]; Domain of unknown function (DUF4217) [PF13959.8, score=39.0]} {Human: ENSG00000178105, DDX10, DEAD-box helicase 10, [RH, Score=437, Expect=5e-141]} {Mouse: ENSMUSG00000053289, Ddx10, DEAD (Asp-Glu-Ala-Asp) box polypeptide 10, [RH, Score=401, Expect=1e-127]} {Dmel: FBgn0030855, CG5800, [RH, Score=387, Expect=4e-123]} {Celegans: WBGene00021277, Y23H5B.6, RNA helicase, [RH, Score=409, Expect=2e-132]} {Smed: dd_Smed_v6_10133_0_1, dd_Smed_v6_10133_0_1, [Score=271, Expect=2e-82]} {RNA1509_22315} {RNA1310_8808} {RNA815_3348.1} Mlig455_046076 {REF} {Length: 2433} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=84.3]; Domain of unknown function (DUF4217) [PF13959.8, score=39.0]} {Human: ENSG00000178105, DDX10, DEAD-box helicase 10, [RH, Score=436, Expect=5e-141]} {Mouse: ENSMUSG00000053289, Ddx10, DEAD (Asp-Glu-Ala-Asp) box polypeptide 10, [RH, Score=401, Expect=1e-127]} {Dmel: FBgn0030855, CG5800, [RH, Score=387, Expect=5e-123]} {Celegans: WBGene00021277, Y23H5B.6, RNA helicase, [RH, Score=409, Expect=2e-132]} {Smed: dd_Smed_v6_10133_0_1, dd_Smed_v6_10133_0_1, [Score=271, Expect=2e-82]} {RNA1509_10762, RNA1509_22315} {RNA1310_8808, RNA1509_10762, RNA1509_22315} {RNA1509_10762, RNA1509_22315, RNA815_3348.1} |
| 4. | MligTC455_37599 | 1354 | 28.22 | Mlig455_049110, Mlig455_049136 | Neo: Irradiation Age: logFC(26M/2M)=-0.303 |
MPPED1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_049110 {REF} {Length: 3264} {Human: ENSG00000186732, MPPED1, metallophosphoesterase domain containing 1, [Score=84.7, Expect=9e-18]; ENSG00000066382, MPPED2, metallophosphoesterase domain containing 2, [Score=80.9, Expect=1e-16]} {Mouse: ENSMUSG00000041708, Mpped1, metallophosphoesterase domain containing 1, [Score=85.1, Expect=4e-18]; ENSMUSG00000016386, Mpped2, metallophosphoesterase domain containing 2, [Score=81.3, Expect=6e-17]} {Celegans: WBGene00016101, C25E10.12, UPF0046 protein C25E10.12, [Score=68.9, Expect=5e-13]} {Smed: dd_Smed_v6_9610_0_1, dd_Smed_v6_9610_0_1, [RH, Score=134, Expect=8e-37]} {RNA1509_35234, RNA1509_36051} {RNA1310_6358, RNA1509_36051} {RNA1509_36051, RNA815_1949.1} Mlig455_049136 {REF} {Length: 3292} {Human: ENSG00000186732, MPPED1, metallophosphoesterase domain containing 1, [Score=84.7, Expect=9e-18]; ENSG00000066382, MPPED2, metallophosphoesterase domain containing 2, [Score=80.9, Expect=1e-16]} {Mouse: ENSMUSG00000041708, Mpped1, metallophosphoesterase domain containing 1, [Score=85.1, Expect=4e-18]; ENSMUSG00000016386, Mpped2, metallophosphoesterase domain containing 2, [Score=81.3, Expect=6e-17]} {Celegans: WBGene00016101, C25E10.12, UPF0046 protein C25E10.12, [Score=68.9, Expect=5e-13]} {Smed: dd_Smed_v6_9610_0_1, dd_Smed_v6_9610_0_1, [RH, Score=134, Expect=8e-37]} {RNA1509_23763, RNA1509_35234, RNA1509_9969} {RNA1310_5232.1, RNA1509_23763, RNA1509_35234, RNA1509_9969} {RNA1509_23763, RNA1509_35234, RNA1509_9969, RNA815_1949.1} |
| 5. | MligTC455_50553 | 1334 | 27.8 | Mlig455_049371, Mlig455_062294 | Neo: Irradiation Age: - Region-enriched R4: 1.497/0.00111 |
0.96 | - | - | - | 0.960 | - | - | Mlig455_049371 {REF} {Length: 2106} {TRANSSPLICED} {Pfam: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain [PF09995.11, score=24.8]} {RNA1509_24816, RNA1509_40079} {RNA1310_8057, RNA1509_24816, RNA1509_40079} {RNA1509_24816, RNA1509_40079, RNA815_19398} Mlig455_062294 {REF} {Length: 1623} {TRANSSPLICED} {Pfam: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain [PF09995.11, score=27.4]} {RNA1509_24816} {RNA1310_8057} {RNA815_19398} |
|
| 6. | MligTC455_46974 | 1727 | 35.98 | Mlig455_056646 | Neo: - Age: Down-Up-Up |
CNOT3 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_056646 {REF} {Length: 2948} {Pfam: Not1 N-terminal domain, CCR4-Not complex component [PF04065.17, score=262.1]; NOT2 / NOT3 / NOT5 family [PF04153.20, score=119.6]} {Human: ENSG00000273943, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000274176, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000277114, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000274616, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000274941, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000277600, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000275979, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000277615, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000088038, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]; ENSG00000276082, CNOT3, CCR4-NOT transcription complex subunit 3, [Score=213, Expect=2e-58]} {Mouse: ENSMUSG00000035632, Cnot3, CCR4-NOT transcription complex, subunit 3, [RH, Score=211, Expect=1e-61]} {Dmel: FBgn0033029, Not3, CCR4-NOT transcription complex subunit 3, [RH, Score=265, Expect=1e-76]} {Celegans: WBGene00003826, ntl-3, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=185, Expect=2e-49]} {Smed: dd_Smed_v6_5044_0_1, dd_Smed_v6_5044_0_1, [RH, Score=229, Expect=8e-65]} {RNA1509_12886, RNA1509_21644} {RNA1310_4741.1, RNA1509_21644} {RNA1509_21644, RNA815_11164} |