Data search
Results for MligTC455_50553
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50553 | 1334 | 27.80 | Mlig455_049371, Mlig455_062294 | Neo: Irradiation Age: - Region-enriched R4: 1.497/0.00111 |
Mlig455_049371 {REF} {Length: 2106} {TRANSSPLICED} {Pfam: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain [PF09995.11, score=24.8]} {RNA1509_24816, RNA1509_40079} {RNA1310_8057, RNA1509_24816, RNA1509_40079} {RNA1509_24816, RNA1509_40079, RNA815_19398} Mlig455_062294 {REF} {Length: 1623} {TRANSSPLICED} {Pfam: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain [PF09995.11, score=27.4]} {RNA1509_24816} {RNA1310_8057} {RNA815_19398} |
Cumulative graph for MligTC455_50553
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.036 | 5.042 | 0.96478 | 1.00000 | |
| RegionR2 | 0.188 | 5.042 | 0.66154 | 0.99321 | |
| RegionR3 | -0.381 | 5.042 | 0.29539 | 0.83721 | |
| RegionR4 | 1.497 | 5.042 | 0.00007 | 0.00111 | |
| RegionR5 | 0.368 | 5.042 | 0.24293 | 0.55569 | |
| RegionR6 | -0.062 | 5.042 | 0.86115 | 1.00000 | |
| RegionR7 | -0.557 | 5.042 | 0.23134 | 0.85491 | |
| RegionR8 | -1.089 | 5.042 | 0.07114 | 0.51080 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.62 | 5.042 | 0.54017 | 1.00000 | |
| RegenerationR2 | 0.186 | 5.042 | 0.62300 | 0.92413 | |
| RegenerationR3 | 0.89 | 5.042 | 0.03553 | 0.33382 | |
| RegenerationR4 | -0.453 | 5.042 | 0.26907 | 0.71571 | |
| RegenerationR5 | 0.336 | 5.042 | 0.38308 | 0.78825 | |
| RegenerationR6 | 0.823 | 5.042 | 0.04461 | 0.26400 | |
| RegenerationBL | 1.214 | 5.042 | 0.00687 | 0.08059 | |
| RegenerationTP | 0.436 | 5.042 | 0.43311 | 0.85538 |
Genes with expression patterns similar to MligTC455_50553
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50553 | 1334 | 27.8 | Mlig455_049371, Mlig455_062294 | Neo: Irradiation Age: - Region-enriched R4: 1.497/0.00111 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049371 {REF} {Length: 2106} {TRANSSPLICED} {Pfam: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain [PF09995.11, score=24.8]} {RNA1509_24816, RNA1509_40079} {RNA1310_8057, RNA1509_24816, RNA1509_40079} {RNA1509_24816, RNA1509_40079, RNA815_19398} Mlig455_062294 {REF} {Length: 1623} {TRANSSPLICED} {Pfam: ER-bound oxygenase mpaB/B'/Rubber oxygenase, catalytic domain [PF09995.11, score=27.4]} {RNA1509_24816} {RNA1310_8057} {RNA815_19398} |
|
| 2. | MligTC455_14735 | 296 | 6.16 | Mlig455_039449 | Neo: - Age: - |
1.734 | - | - | - | 0.778 | - | 0.956 | Mlig455_039449 {REF} {Length: 354} {NoTransDecoderORF} {RNA1310_106071} {RNA815_53172} | |
| 3. | MligTC455_48223 | 1445 | 30.11 | Mlig455_031634 | Neo: Neoblast, stringent Age: - |
NCBP2 | 1.682 | - | - | - | 0.965 | 0.717 | - | Mlig455_031634 {REF} {Length: 2637} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=62.1]} {Human: ENSG00000114503, NCBP2, nuclear cap binding protein subunit 2, [RH, Score=241, Expect=8e-82]} {Mouse: ENSMUSG00000022774, Ncbp2, nuclear cap binding protein subunit 2, [RH, Score=241, Expect=4e-82]} {Dmel: FBgn0022943, Cbp20, cap binding protein 20, [RH, Score=244, Expect=1e-83]} {Celegans: WBGene00009141, ncbp-2, Nuclear cap-binding protein subunit 2, [RH, Score=210, Expect=5e-70]} {Smed: dd_Smed_v6_4139_0_1, dd_Smed_v6_4139_0_1, [RH, Score=231, Expect=3e-78]} {RNA1509_16228, RNA1509_24012, RNA1509_25225, RNA1509_42200} {RNA1310_30861.1, RNA1509_16228, RNA1509_24012, RNA1509_25225, RNA1509_42200} {RNA1509_16228, RNA1509_24012, RNA1509_25225, RNA1509_42200, RNA815_14824.1} |
| 4. | MligTC455_46972 | 188 | 3.91 | Mlig455_053488 | Neo: - Age: - |
CNOT3 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_053488 {REF} {Length: 2868} {Pfam: Not1 N-terminal domain, CCR4-Not complex component [PF04065.17, score=261.8]; NOT2 / NOT3 / NOT5 family [PF04153.20, score=119.6]} {Human: ENSG00000088038, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=262, Expect=2e-76]; ENSG00000275979, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277615, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274176, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000273943, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277114, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274616, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000276082, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000277600, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]; ENSG00000274941, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=259, Expect=8e-75]} {Mouse: ENSMUSG00000035632, Cnot3, CCR4-NOT transcription complex, subunit 3, [RH, Score=211, Expect=2e-61]} {Dmel: FBgn0033029, Not3, CCR4-NOT transcription complex subunit 3, [RH, Score=265, Expect=1e-76]} {Celegans: WBGene00003826, ntl-3, NOT-Like (Yeast CCR4/NOT complex component), [RH, Score=184, Expect=5e-49]} {Smed: dd_Smed_v6_5044_0_1, dd_Smed_v6_5044_0_1, [RH, Score=228, Expect=9e-65]} {RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173} {RNA1310_4741.1, RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173} {RNA1509_12886, RNA1509_14672, RNA1509_3131, RNA1509_33173, RNA815_11164} |
| 5. | MligTC455_33288 | 692 | 14.41 | Mlig455_061850 | Neo: - Age: Down-Up-Up Region-specific R2: 4.145 Region-enriched R2: 4.075/0.00000 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_061850 {REF} {Length: 889} {RNA1509_48963} {RNA1310_87307} {RNA815_23468} | |
| 6. | MligTC455_42769 | 800 | 16.66 | Mlig455_004685, Mlig455_004745, Mlig455_004846 | Neo: - Age: logFC(26M/2M)=0.499 Region-enriched R4: 2.740/0.00419 |
CSTF1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_004685 {REF} {Length: 1636} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=106.2]; Cleavage stimulation factor subunit 1, dimerisation domain [PF16699.7, score=78.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.1]} {Human: ENSG00000101138, CSTF1, cleavage stimulation factor subunit 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000027498, Cstf1, cleavage stimulation factor, 3' pre-RNA, subunit 1, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0039867, CstF50, Cleavage stimulation factor 50 kD subunit, [RH, Score=444, Expect=7e-155]} {Celegans: WBGene00000773, cpf-1, Cleavage and Polyadenylation Factor, [RH, Score=444, Expect=1e-154]} {Smed: dd_Smed_v6_6400_0_1, dd_Smed_v6_6400_0_1, [RH, Score=517, Expect=0.0]} {RNA1509_37040} {RNA1310_8078, RNA1509_37040} {RNA1509_37040, RNA815_2663} Mlig455_004745 {REF} {Length: 1633} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=106.2]; Cleavage stimulation factor subunit 1, dimerisation domain [PF16699.7, score=78.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.1]} {Human: ENSG00000101138, CSTF1, cleavage stimulation factor subunit 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000027498, Cstf1, cleavage stimulation factor, 3' pre-RNA, subunit 1, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0039867, CstF50, Cleavage stimulation factor 50 kD subunit, [RH, Score=444, Expect=7e-155]} {Celegans: WBGene00000773, cpf-1, Cleavage and Polyadenylation Factor, [RH, Score=444, Expect=1e-154]} {Smed: dd_Smed_v6_6400_0_1, dd_Smed_v6_6400_0_1, [RH, Score=517, Expect=0.0]} {RNA1509_37040} {RNA1310_8078} {RNA815_2663} Mlig455_004846 {REF} {Length: 1632} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=106.2]; Cleavage stimulation factor subunit 1, dimerisation domain [PF16699.7, score=78.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=61.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.1]} {Human: ENSG00000101138, CSTF1, cleavage stimulation factor subunit 1, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000027498, Cstf1, cleavage stimulation factor, 3' pre-RNA, subunit 1, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0039867, CstF50, Cleavage stimulation factor 50 kD subunit, [RH, Score=444, Expect=7e-155]} {Celegans: WBGene00000773, cpf-1, Cleavage and Polyadenylation Factor, [RH, Score=444, Expect=1e-154]} {Smed: dd_Smed_v6_6400_0_1, dd_Smed_v6_6400_0_1, [RH, Score=517, Expect=0.0]} {RNA1509_37040} {RNA1310_8078} {RNA815_2663} |
| 7. | MligTC455_25396 | 930 | 19.37 | Mlig455_029043, Mlig455_029047 | Neo: - Age: - |
BIRC2, XIAP | 0.958 | - | - | - | - | - | 0.958 | Mlig455_029043 {REF} {Length: 409} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=52.8]; Prokaryotic RING finger family 4 [PF14447.8, score=25.3]; Ring finger domain [PF13639.8, score=20.5]; zinc-RING finger domain [PF14634.8, score=19.2]} {Human: ENSG00000110330, BIRC2, baculoviral IAP repeat containing 2, [Score=64.7, Expect=3e-13]; ENSG00000023445, BIRC3, baculoviral IAP repeat containing 3, [Score=63.9, Expect=4e-13]} {Mouse: ENSMUSG00000057367, Birc2, baculoviral IAP repeat-containing 2, [Score=63.9, Expect=3e-13]; ENSMUSG00000032000, Birc3, baculoviral IAP repeat-containing 3, [Score=60.8, Expect=3e-12]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [Score=64.3, Expect=2e-13]} {Celegans: WBGene00017342, F10D7.5, [Score=48.5, Expect=5e-08]} {Smed: dd_Smed_v6_1704_0_1, dd_Smed_v6_1704_0_1, [Score=51.6, Expect=3e-09]} {RNA1509_44915} {RNA1310_54850} {RNA815_16581.1} Mlig455_029047 {REF} {Length: 2555} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=81.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=47.9]; Prokaryotic RING finger family 4 [PF14447.8, score=20.4]} {Human: ENSG00000101966, XIAP, X-linked inhibitor of apoptosis, [Score=104, Expect=3e-23]} {Mouse: ENSMUSG00000025860, Xiap, X-linked inhibitor of apoptosis, [Score=105, Expect=8e-24]} {Dmel: FBgn0015247, Diap2, Death-associated inhibitor of apoptosis 2, [RH, Score=133, Expect=3e-33]} {Celegans: WBGene00017342, F10D7.5, [Score=48.9, Expect=7e-06]} {Smed: dd_Smed_v6_4626_0_1, dd_Smed_v6_4626_0_1, [RH, Score=67.0, Expect=1e-11]} {RNA1509_10778} {RNA1310_15832.1} {RNA815_899.2} |
| 8. | MligTC455_43816 | 875 | 18.23 | Mlig455_047962 | Neo: Int S/G2/M Age: - |
CDC73 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_047962 {REF} {Length: 2631} {Pfam: Paf1 complex subunit CDC73 N-terminal [PF16050.7, score=263.8]; RNA pol II accessory factor, Cdc73 family, C-terminal [PF05179.16, score=159.4]} {Human: ENSG00000134371, CDC73, cell division cycle 73, [RH, Score=296, Expect=5e-92]} {Mouse: ENSMUSG00000026361, Cdc73, cell division cycle 73, Paf1/RNA polymerase II complex component, [RH, Score=296, Expect=3e-92]} {Dmel: FBgn0037657, hyx, hyrax, [RH, Score=280, Expect=4e-86]} {Celegans: WBGene00018064, cdc-73, Cell division cycle protein 73, [RH, Score=145, Expect=3e-37]} {Smed: dd_Smed_v6_3056_0_1, dd_Smed_v6_3056_0_1, [RH, Score=292, Expect=3e-90]} {RNA1509_11097, RNA1509_45243, RNA1509_47783, RNA1509_48317, RNA1509_56989, RNA1509_57062, RNA1509_59183} {RNA1310_6871.1, RNA1509_11097, RNA1509_45243, RNA1509_47783, RNA1509_48317, RNA1509_56989, RNA1509_57062, RNA1509_59183} {RNA1509_11097, RNA1509_45243, RNA1509_47783, RNA1509_48317, RNA1509_56989, RNA1509_57062, RNA1509_59183, RNA815_2766.1} |