TomoSeq data search

Data search

Results for MligTC455_42834

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42834

324

6.76

Mlig455_006852

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.037

MRPS21

Mlig455_006852 {REF} {Length: 475} {TRANSSPLICED} {Pfam: Ribosomal protein S21 [PF01165.22, score=23.3]} {Human: ENSG00000266472, MRPS21, mitochondrial ribosomal protein S21, [RH, Score=81.6, Expect=3e-21]} {Mouse: ENSMUSG00000054312, Mrps21, mitochondrial ribosomal protein S21, [RH, Score=79.0, Expect=2e-20]} {Dmel: FBgn0044511, mRpS21, mitochondrial ribosomal protein S21, [RH, Score=67.0, Expect=6e-16]} {Celegans: WBGene00017924, mrps-21, Mitochondrial Ribosomal Protein, Small, [RH, Score=46.6, Expect=7e-08]} {Smed: dd_Smed_v6_1993_0_1, dd_Smed_v6_1993_0_1, [RH, Score=88.6, Expect=2e-24]} {RNA1509_19347} {RNA1310_61090} {RNA815_37726}

Cumulative graph for MligTC455_42834

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.675	3.202	0.76564	1.00000
RegionR2	-0.028	3.202	0.99266	1.00000
RegionR3	-1.228	3.202	0.38909	0.91980
RegionR4	-0.018	3.202	0.99064	1.00000
RegionR5	0.742	3.202	0.55271	0.91357
RegionR6	-0.179	3.202	0.89833	1.00000
RegionR7	-0.525	3.202	0.72658	1.00000
RegionR8	0.561	3.202	0.74708	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.674	3.202	0.34773	1.00000
RegenerationR2	0.465	3.202	0.77380	0.98128
RegenerationR3	2.235	3.202	0.22183	0.65741
RegenerationR4	1.413	3.202	0.40188	0.81451
RegenerationR5	0.643	3.202	0.69499	0.94974
RegenerationR6	0.766	3.202	0.65177	0.89937
RegenerationBL	0.561	3.202	0.72602	1.00000
RegenerationTP	1.844	3.202	0.26150	0.70925

Genes with expression patterns similar to MligTC455_42834

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42834	324	6.76	Mlig455_006852	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.037	MRPS21	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_006852 {REF} {Length: 475} {TRANSSPLICED} {Pfam: Ribosomal protein S21 [PF01165.22, score=23.3]} {Human: ENSG00000266472, MRPS21, mitochondrial ribosomal protein S21, [RH, Score=81.6, Expect=3e-21]} {Mouse: ENSMUSG00000054312, Mrps21, mitochondrial ribosomal protein S21, [RH, Score=79.0, Expect=2e-20]} {Dmel: FBgn0044511, mRpS21, mitochondrial ribosomal protein S21, [RH, Score=67.0, Expect=6e-16]} {Celegans: WBGene00017924, mrps-21, Mitochondrial Ribosomal Protein, Small, [RH, Score=46.6, Expect=7e-08]} {Smed: dd_Smed_v6_1993_0_1, dd_Smed_v6_1993_0_1, [RH, Score=88.6, Expect=2e-24]} {RNA1509_19347} {RNA1310_61090} {RNA815_37726}
2.	MligTC455_13958	157	3.27	Mlig455_003609	Neo: - Age: - Region-enriched R3: 2.933/0.00923		2.495	-	-	-	0.757	0.951	0.787	Mlig455_003609 {REF} {Length: 1179} {NoTransDecoderORF} {RNA1509_57187} {RNA1310_83315, RNA1509_57187} {RNA1509_57187, RNA815_54608}
3.	MligTC455_53015	462	9.61	Mlig455_046085, Mlig455_046710, Mlig455_047061	Neo: - Age: -		1.697	-	-	-	-	0.971	0.726	Mlig455_046085 {REF} {Length: 90} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52245} {RNA1310_76980} {RNA815_21429.1} Mlig455_046710 {REF} {Length: 707} {TRANSSPLICED} {RNA1509_35561} {RNA1310_52621} {RNA815_21429.1} Mlig455_047061 {REF} {Length: 580} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35561} {RNA1310_61780} {RNA815_35137}
4.	MligTC455_40134	396	8.25	Mlig455_003061, Mlig455_003267	Neo: Int S/G2/M Age: -		1.693	-	-	-	-	0.966	0.727	Mlig455_003061 {REF} {Length: 2554} {Pfam: WD domain, G-beta repeat [PF00400.34, score=27.5]} {RNA1509_32538, RNA1509_54728} {RNA1310_22220, RNA1509_32538, RNA1509_54728} {RNA1509_32538, RNA1509_54728, RNA815_9624} Mlig455_003267 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.3]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [Score=48.9, Expect=4e-06]} {RNA1509_32538} {RNA1310_22220} {RNA815_9624}
5.	MligTC455_31512	462	9.62	Mlig455_059745	Neo: - Age: Up-Up-Down Region-enriched R4: 2.813/0.00575 Region-enriched R5: 1.844/0.02363	MTHFD1	1.688	-	-	0.729	-	-	0.959	Mlig455_059745 {REF} {Length: 5144} {Pfam: Formate--tetrahydrofolate ligase [PF01268.21, score=787.0]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=216.8]; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain [PF00763.25, score=109.7]} {Human: ENSG00000100714, MTHFD1, methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, [RH, Score=1075, Expect=0.0]} {Mouse: ENSMUSG00000021048, Mthfd1, methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase, [RH, Score=1070, Expect=0.0]} {Dmel: FBgn0020385, pug, pugilist, [RH, Score=1027, Expect=0.0]} {Celegans: WBGene00019492, K07E3.4, [RH, Score=732, Expect=0.0]} {Smed: dd_Smed_v6_1858_0_1, dd_Smed_v6_1858_0_1, [RH, Score=1028, Expect=0.0]} {RNA1509_1569} {RNA1310_1725.1, RNA1509_1569} {RNA1509_1569, RNA815_946}
6.	MligTC455_51937	465	9.7	Mlig455_000671	Neo: - Age: Down-Up-Up	BBIP1	1.681	-	-	-	-	0.980	0.701	Mlig455_000671 {REF} {Length: 795} {TRANSSPLICED} {Pfam: Cilia BBSome complex subunit 10 [PF14777.8, score=81.5]} {Human: ENSG00000214413, BBIP1, BBSome interacting protein 1, [RH, Score=58.9, Expect=1e-12]} {Mouse: ENSMUSG00000084957, Bbip1, BBSome interacting protein 1, [RH, Score=59.3, Expect=3e-13]} {Dmel: FBgn0260237, CG42511, [RH, Score=40.4, Expect=6e-06]} {Celegans: WBGene00019482, K07C11.10, [RH, Score=43.5, Expect=8e-07]} {Smed: dd_Smed_v6_12991_0_1, dd_Smed_v6_12991_0_1, [Score=59.3, Expect=2e-13]} {RNA1509_11275, RNA1509_30377} {RNA1310_33550, RNA1509_11275, RNA1509_30377} {RNA1509_11275, RNA1509_30377, RNA815_15542}
7.	MligTC455_36916	558	11.63	Mlig455_010676	Neo: - Age: Up-Down-Down	APAF1	0.977	-	-	-	-	-	0.977	Mlig455_010676 {REF} {Length: 6152} {TRANSSPLICED} {Pfam: NB-ARC domain [PF00931.24, score=61.2]; APAF-1 helical domain [PF17908.3, score=23.9]; Caspase recruitment domain [PF00619.23, score=22.5]} {Human: ENSG00000120868, APAF1, apoptotic peptidase activating factor 1, [Score=166, Expect=7e-41]} {Mouse: ENSMUSG00000019979, Apaf1, apoptotic peptidase activating factor 1, [Score=182, Expect=5e-46]} {RNA1509_15475, RNA1509_30666, RNA1509_3106} {RNA1310_1478, RNA1509_15475, RNA1509_30666} {RNA1509_15475, RNA1509_30666, RNA815_415}
8.	MligTC455_44456	464	9.67	Mlig455_055489	Neo: - Age: -	FH	0.96	-	-	-	-	-	0.960	Mlig455_055489 {REF} {Length: 2695} {TRANSSPLICED} {Pfam: Lyase [PF00206.22, score=358.0]; Fumarase C C-terminus [PF10415.11, score=87.5]} {Human: ENSG00000091483, FH, fumarate hydratase, [RH, Score=645, Expect=0.0]} {Mouse: ENSMUSG00000026526, Fh1, fumarate hydratase 1, [RH, Score=648, Expect=0.0]} {Dmel: FBgn0028336, l(1)G0255, lethal (1) G0255, [RH, Score=635, Expect=0.0]} {Celegans: WBGene00001503, fum-1, Probable fumarate hydratase, mitochondrial, [RH, Score=656, Expect=0.0]} {Smed: dd_Smed_v6_741_1_1, dd_Smed_v6_741_1_1, [RH, Score=536, Expect=0.0]} {RNA1509_11902, RNA1509_58388} {RNA1310_18879.1, RNA1509_11902, RNA1509_58388} {RNA1509_11902, RNA1509_58388, RNA815_7234}
9.	MligTC455_44248	699	14.57	Mlig455_053762	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_053762 {REF} {Length: 786} {TRANSSPLICED} {RNA1509_30177} {RNA1310_18791, RNA1509_30177} {RNA1509_30177, RNA815_10594.2}
10.	MligTC455_14335	51	1.07	Mlig455_010414	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_010414 {REF} {Length: 2533} {RNA1509_18723} {RNA1310_34722} {RNA815_19865}
11.	MligTC455_16703	414	8.62	Mlig455_043256, Mlig455_043281	Neo: - Age: logFC(26M/2M)=0.464 Region-enriched R5: 2.416/0.00237	GOSR2	0.956	-	-	-	-	0.956	-	Mlig455_043256 {REF} {Length: 998} {TRANSSPLICED} {Pfam: Snare region anchored in the vesicle membrane C-terminus [PF12352.10, score=54.6]; Sec20 [PF03908.15, score=21.1]} {Human: ENSG00000108433, GOSR2, golgi SNAP receptor complex member 2, [RH, Score=165, Expect=4e-51]} {Mouse: ENSMUSG00000020946, Gosr2, golgi SNAP receptor complex member 2, [RH, Score=176, Expect=2e-55]} {Dmel: FBgn0260856, Membrin, [RH, Score=137, Expect=2e-40]} {Celegans: WBGene00007128, memb-1, Golgi SNAP receptor complex member 2 homolog memb-1, [RH, Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_7430_0_1, dd_Smed_v6_7430_0_1, [RH, Score=159, Expect=6e-49]} {RNA1509_13895} {RNA1310_2428.2} {RNA815_15259.1} Mlig455_043281 {REF} {Length: 2773} {TRANSSPLICED} {Pfam: Snare region anchored in the vesicle membrane C-terminus [PF12352.10, score=54.6]; Sec20 [PF03908.15, score=21.0]} {Human: ENSG00000108433, GOSR2, golgi SNAP receptor complex member 2, [RH, Score=165, Expect=4e-51]} {Mouse: ENSMUSG00000020946, Gosr2, golgi SNAP receptor complex member 2, [RH, Score=176, Expect=1e-55]} {Dmel: FBgn0260856, Membrin, [RH, Score=137, Expect=3e-40]} {Celegans: WBGene00007128, memb-1, Golgi SNAP receptor complex member 2 homolog memb-1, [RH, Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_7430_0_1, dd_Smed_v6_7430_0_1, [RH, Score=159, Expect=6e-49]} {RNA1509_13895} {RNA1310_2428.1} {RNA815_15259.1}
12.	MligTC455_41109	212	4.42	Mlig455_044541, Mlig455_068558	Neo: - Age: Down-Down-Up		0.955	-	-	-	-	0.955	-	Mlig455_044541 {REF} {Length: 2618} {RNA1509_50994} {RNA1310_14102} {RNA815_21266} Mlig455_068558 {REF} {Length: 2571} {RNA1509_50994} {RNA1310_14102} {RNA815_21266}
13.	MligTC455_19203	1137	23.7	Mlig455_018232	Neo: - Age: logFC(26M/2M)=2.386 Region-enriched R4: 1.825/0.00025 Region-enriched R5: 1.146/0.00880	DEGS1	0.954	-	-	-	-	-	0.954	Mlig455_018232 {REF} {Length: 2866} {TRANSSPLICED} {Pfam: Fatty acid desaturase [PF00487.26, score=85.1]; Sphingolipid Delta4-desaturase (DES) [PF08557.12, score=76.9]} {Human: ENSG00000143753, DEGS1, delta 4-desaturase, sphingolipid 1, [RH, Score=404, Expect=9e-141]; ENSG00000168350, DEGS2, delta 4-desaturase, sphingolipid 2, [RH, Score=392, Expect=5e-136]} {Mouse: ENSMUSG00000038633, Degs1, delta(4)-desaturase, sphingolipid 1, [RH, Score=402, Expect=9e-140]} {Dmel: FBgn0001941, ifc, infertile crescent, [RH, Score=443, Expect=3e-156]} {Celegans: WBGene00013197, ttm-5, Putative sphingolipid delta(4)-desaturase/C4-monooxygenase, [RH, Score=364, Expect=8e-125]} {Smed: dd_Smed_v6_1100_0_1, dd_Smed_v6_1100_0_1, [RH, Score=449, Expect=1e-158]} {RNA1509_17143} {RNA1310_6477.1} {RNA815_6765}
14.	MligTC455_26535	92	1.91	Mlig455_028631	Neo: - Age: logFC(26M/2M)=-0.989		0.954	-	-	-	-	0.954	-	Mlig455_028631 {REF} {Length: 2945} {TRANSSPLICED} {Pfam: Guanine nucleotide exchange factor synembryn [PF10165.11, score=55.1]} {RNA1509_37009, RNA1509_38508} {RNA1310_10694.2, RNA1509_37009, RNA1509_38508} {RNA1509_37009, RNA1509_38508, RNA815_4977}
15.	MligTC455_01050	3538	73.71	Mlig455_012178, Mlig455_028829, Mlig455_028849	Neo: - Age: logFC(26M/2M)=0.346		0.952	-	-	-	-	-	0.952	Mlig455_012178 {REF} {Length: 448} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_31304} {RNA1310_64210.2} Mlig455_028829 {REF} {Length: 3866} {RNA1509_44198} {RNA1310_7625.1} {RNA815_9375.1} Mlig455_028849 {REF} {Length: 3623} {RNA1509_31304, RNA1509_42179, RNA1509_56589} {RNA1310_7625.1, RNA1509_31304, RNA1509_42179, RNA1509_56589} {RNA1509_31304, RNA1509_42179, RNA1509_56589, RNA815_9375.1}
16.	MligTC455_02116	22	0.45	Mlig455_007236	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_007236 {REF} {Length: 1582} {RNA1310_45542} {RNA815_27640}
17.	MligTC455_28233	391	8.15	Mlig455_024168	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.679	NPDC1	0.951	-	-	-	-	0.951	-	Mlig455_024168 {REF} {Length: 3024} {Pfam: Neural proliferation differentiation control-1 protein (NPDC1) [PF06809.13, score=97.1]} {Human: ENSG00000107281, NPDC1, neural proliferation, differentiation and control 1, [Score=100, Expect=2e-23]} {Mouse: ENSMUSG00000015094, Npdc1, neural proliferation, differentiation and control 1, [Score=102, Expect=2e-24]} {Dmel: FBgn0265182, CG44247, [Score=106, Expect=2e-25]} {Celegans: WBGene00000277, cab-1, [Score=56.6, Expect=8e-09]} {Smed: dd_Smed_v6_2985_0_1, dd_Smed_v6_2985_0_1, [RH, Score=103, Expect=6e-26]} {RNA1509_14603} {RNA1310_17203.1, RNA1509_14603} {RNA1509_14603, RNA815_396}
18.	MligTC455_28587	1330	27.7	Mlig455_002542, Mlig455_047505	Neo: - Age: - Region-enriched R4: 4.665/0.00011		0.95	-	-	-	-	0.950	-	Mlig455_002542 {REF} {Length: 252} {NoTransDecoderORF} {RNA1310_10854.2} {RNA815_29999} Mlig455_047505 {REF} {Length: 31} {NoTransDecoderORF}

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