Data search


search
Exact
Search

Results for MligTC455_42892

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42892 1072 22.33 Mlig455_048606, Mlig455_048684

Neo: -

Age: -

C15orf40

Mlig455_048606 {REF} {Length: 617} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YggU family COG1872 [PF02594.18, score=79.0]} {Human: ENSG00000169609, C15orf40, chromosome 15 open reading frame 40, [RH, Score=70.5, Expect=2e-15]} {Mouse: ENSMUSG00000025102, 3110040N11Rik, RIKEN cDNA 3110040N11 gene, [RH, Score=75.1, Expect=9e-18]} {Dmel: FBgn0035415, CG14966, [RH, Score=75.9, Expect=4e-18]} {RNA1509_41684} {RNA1310_45572} {RNA815_31104.2}

Mlig455_048684 {REF} {Length: 619} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YggU family COG1872 [PF02594.18, score=79.4]} {Human: ENSG00000169609, C15orf40, chromosome 15 open reading frame 40, [RH, Score=70.9, Expect=1e-15]} {Mouse: ENSMUSG00000025102, 3110040N11Rik, RIKEN cDNA 3110040N11 gene, [RH, Score=74.3, Expect=2e-17]} {Dmel: FBgn0035415, CG14966, [RH, Score=76.6, Expect=3e-18]} {RNA1509_41684} {RNA1310_45572, RNA1509_41684} {RNA1509_41684, RNA815_31104.2}

Cumulative graph for MligTC455_42892

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.501 4.782 0.60594 1.00000
RegionR2 -1.246 4.782 0.02517 0.17749
RegionR3 -0.475 4.782 0.30443 0.84594
RegionR4 1.374 4.782 0.01217 0.07068
RegionR5 1.03 4.782 0.01019 0.05853
RegionR6 -0.192 4.782 0.67096 1.00000
RegionR7 -0.318 4.782 0.52758 1.00000
RegionR8 -0.673 4.782 0.28105 0.90706

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.019 4.782 0.02395 0.59347
RegenerationR2 -0.421 4.782 0.42644 0.83205
RegenerationR3 0.184 4.782 0.74179 0.96149
RegenerationR4 -0.452 4.782 0.44019 0.83709
RegenerationR5 -0.373 4.782 0.47496 0.84413
RegenerationR6 -0.131 4.782 0.81191 0.98370
RegenerationBL -0.085 4.782 0.87741 1.00000
RegenerationTP -0.522 4.782 0.40051 0.82938


Genes with expression patterns similar to MligTC455_42892

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42892 1072 22.33 Mlig455_048606, Mlig455_048684

Neo: -

Age: -

C15orf40 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_048606 {REF} {Length: 617} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YggU family COG1872 [PF02594.18, score=79.0]} {Human: ENSG00000169609, C15orf40, chromosome 15 open reading frame 40, [RH, Score=70.5, Expect=2e-15]} {Mouse: ENSMUSG00000025102, 3110040N11Rik, RIKEN cDNA 3110040N11 gene, [RH, Score=75.1, Expect=9e-18]} {Dmel: FBgn0035415, CG14966, [RH, Score=75.9, Expect=4e-18]} {RNA1509_41684} {RNA1310_45572} {RNA815_31104.2}

Mlig455_048684 {REF} {Length: 619} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YggU family COG1872 [PF02594.18, score=79.4]} {Human: ENSG00000169609, C15orf40, chromosome 15 open reading frame 40, [RH, Score=70.9, Expect=1e-15]} {Mouse: ENSMUSG00000025102, 3110040N11Rik, RIKEN cDNA 3110040N11 gene, [RH, Score=74.3, Expect=2e-17]} {Dmel: FBgn0035415, CG14966, [RH, Score=76.6, Expect=3e-18]} {RNA1509_41684} {RNA1310_45572, RNA1509_41684} {RNA1509_41684, RNA815_31104.2}
2. MligTC455_35110 687 14.31 Mlig455_046842, Mlig455_046848

Neo: Neoblast

Age: -

SMYD2 1.67 - - - 0.710 0.960 -

Mlig455_046842 {REF} {Length: 2020} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=41.2]} {Human: ENSG00000143499, SMYD2, SET and MYND domain containing 2, [Score=50.8, Expect=8e-07]; ENSG00000004838, ZMYND10, zinc finger MYND-type containing 10, [Score=48.9, Expect=4e-06]} {Mouse: ENSMUSG00000026603, Smyd2, SET and MYND domain containing 2, [Score=47.8, Expect=6e-06]} {Dmel: FBgn0036624, RAF2, RING-associated factor 2, [Score=46.6, Expect=1e-05]} {Celegans: WBGene00044070, set-18, SET (Trithorax/polycomb) domain containing, [Score=46.2, Expect=1e-05]} {Smed: dd_Smed_v6_9973_0_1, dd_Smed_v6_9973_0_1, [Score=50.1, Expect=5e-07]} {RNA1509_13959} {RNA1310_19936.1, RNA1509_13959} {RNA1509_13959, RNA815_19051}

Mlig455_046848 {REF} {Length: 1996} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=41.4]} {Human: ENSG00000143499, SMYD2, SET and MYND domain containing 2, [Score=50.8, Expect=8e-07]; ENSG00000004838, ZMYND10, zinc finger MYND-type containing 10, [Score=48.5, Expect=5e-06]} {Mouse: ENSMUSG00000026603, Smyd2, SET and MYND domain containing 2, [Score=47.8, Expect=5e-06]} {Celegans: WBGene00044070, set-18, SET (Trithorax/polycomb) domain containing, [Score=46.2, Expect=1e-05]} {Smed: dd_Smed_v6_9973_0_1, dd_Smed_v6_9973_0_1, [Score=49.7, Expect=5e-07]} {RNA1509_13959} {RNA1310_19936.1} {RNA815_19051}
3. MligTC455_32390 15058 313.72 Mlig455_020572, Mlig455_020622

Neo: -

Age: logFC(26M/2M)=0.358

Region-enriched R5: 1.010/0.00035

Regeneration-upregulated BL: 1.447

Regeneration-enriched BL: 1.447

SEC61A2 0.972 - - - - 0.972 -

Mlig455_020572 {REF} {Length: 2084} {Pfam: SecY [PF00344.22, score=250.7]; Plug domain of Sec61p [PF10559.11, score=65.1]} {Human: ENSG00000065665, SEC61A2, Sec61 translocon alpha 2 subunit, [RH, Score=854, Expect=0.0]; ENSG00000058262, SEC61A1, Sec61 translocon alpha 1 subunit, [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000025816, Sec61a2, Sec61, alpha subunit 2 (S. cerevisiae), [RH, Score=854, Expect=0.0]; ENSMUSG00000030082, Sec61a1, Sec61 alpha 1 subunit (S. cerevisiae), [RH, Score=852, Expect=0.0]} {Dmel: FBgn0086357, Sec61alpha, Sec61 alpha subunit, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00013311, sec-61, Yeast SEC homolog, [RH, Score=840, Expect=0.0]} {Smed: dd_Smed_v6_282_0_1, dd_Smed_v6_282_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_1223, RNA1509_2816, RNA1509_57133} {RNA1310_13647.1, RNA1509_1223, RNA1509_2816, RNA1509_57133} {RNA1509_1223, RNA1509_2816, RNA1509_57133, RNA815_3854}

Mlig455_020622 {REF} {Length: 2073} {Pfam: SecY [PF00344.22, score=250.3]; Plug domain of Sec61p [PF10559.11, score=65.1]} {Human: ENSG00000065665, SEC61A2, Sec61 translocon alpha 2 subunit, [RH, Score=854, Expect=0.0]; ENSG00000058262, SEC61A1, Sec61 translocon alpha 1 subunit, [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000025816, Sec61a2, Sec61, alpha subunit 2 (S. cerevisiae), [RH, Score=854, Expect=0.0]; ENSMUSG00000030082, Sec61a1, Sec61 alpha 1 subunit (S. cerevisiae), [RH, Score=852, Expect=0.0]} {Dmel: FBgn0086357, Sec61alpha, Sec61 alpha subunit, [RH, Score=862, Expect=0.0]} {Celegans: WBGene00013311, sec-61, Yeast SEC homolog, [RH, Score=841, Expect=0.0]} {Smed: dd_Smed_v6_282_0_1, dd_Smed_v6_282_0_1, [RH, Score=832, Expect=0.0]} {RNA1509_4540} {RNA1310_13647.1, RNA1509_4540} {RNA1509_4540, RNA815_3854}
4. MligTC455_36351 198 4.13 Mlig455_027673

Neo: -

Age: -

Region-enriched R4: 2.723/0.02760

ACP7 0.969 - - - - - 0.969 Mlig455_027673 {REF} {Length: 2184} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=88.8]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=76.0]; Iron/zinc purple acid phosphatase-like protein C [PF14008.8, score=73.9]; Ubiquitin-conjugating enzyme [PF00179.28, score=54.2]; PhoD-like phosphatase [PF09423.12, score=18.3]} {Human: ENSG00000183760, ACP7, acid phosphatase 7, tartrate resistant (putative), [RH, Score=425, Expect=2e-144]} {Mouse: ENSMUSG00000037469, Acp7, acid phosphatase 7, tartrate resistant, [RH, Score=442, Expect=2e-150]} {Dmel: FBgn0030245, CG1637, [RH, Score=422, Expect=4e-143]} {Celegans: WBGene00219316, F21A3.11, Purple acid phosphatase, [RH, Score=406, Expect=2e-136]} {Smed: dd_Smed_v6_1053_0_1, dd_Smed_v6_1053_0_1, [RH, Score=514, Expect=7e-180]} {RNA1509_9245} {RNA1310_47219} {RNA815_24182}
5. MligTC455_45081 317 6.6 Mlig455_018497

Neo: -

Age: -

Region-enriched R4: 2.407/0.01304

PQLC1 0.962 - - - - - 0.962 Mlig455_018497 {REF} {Length: 2325} {Pfam: PQ loop repeat [PF04193.16, score=74.2]} {Human: ENSG00000122490, PQLC1, PQ loop repeat containing 1, [Score=197, Expect=7e-63]} {Mouse: ENSMUSG00000034006, Pqlc1, PQ loop repeat containing 1, [Score=192, Expect=5e-61]} {Dmel: FBgn0031897, CG13784, [Score=206, Expect=1e-66]} {Celegans: WBGene00011827, T19A6.1, [Score=168, Expect=1e-51]} {Smed: dd_Smed_v6_6419_0_1, dd_Smed_v6_6419_0_1, [Score=179, Expect=9e-57]} {RNA1509_32019, RNA1509_47747} {RNA1310_8439, RNA1509_47747} {RNA1509_47747, RNA815_18050}
6. MligTC455_08323 2344 48.84 Mlig455_054182

Neo: Int S/G2/M

Age: -

ROMO1 0.958 - - - - 0.958 - Mlig455_054182 {REF} {Length: 876} {TRANSSPLICED} {Pfam: Reactive mitochondrial oxygen species modulator 1 [PF10247.11, score=80.5]} {Human: ENSG00000125995, ROMO1, reactive oxygen species modulator 1, [RH, Score=86.7, Expect=3e-23]} {Mouse: ENSMUSG00000067847, Romo1, reactive oxygen species modulator 1, [RH, Score=86.7, Expect=2e-23]} {Dmel: FBgn0036488, CG6878, [RH, Score=87.8, Expect=4e-24]} {Smed: dd_Smed_v6_691_0_1, dd_Smed_v6_691_0_1, [RH, Score=76.6, Expect=6e-20]} {RNA1509_18222, RNA1509_19678} {RNA1310_23209.2, RNA1509_18222, RNA1509_19678} {RNA1509_18222, RNA1509_19678, RNA815_29226.2}
7. MligTC455_42742 391 8.14 Mlig455_002747

Neo: -

Age: -

SDF4 0.956 - - - - 0.956 - Mlig455_002747 {REF} {Length: 1553} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=63.0]; EF hand [PF13202.8, score=61.2]; EF-hand domain [PF13405.8, score=55.3]; EF hand [PF00036.34, score=51.8]; EF-hand domain pair [PF13833.8, score=33.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.5]} {Human: ENSG00000078808, SDF4, stromal cell derived factor 4, [RH, Score=126, Expect=2e-32]} {Mouse: ENSMUSG00000029076, Sdf4, stromal cell derived factor 4, [RH, Score=135, Expect=3e-36]} {Dmel: FBgn0051475, CG31475, [RH, Score=90.9, Expect=7e-20]} {Celegans: WBGene00016965, C56C10.9, [RH, Score=93.2, Expect=4e-21]} {Smed: dd_Smed_v6_9880_0_1, dd_Smed_v6_9880_0_1, [RH, Score=150, Expect=3e-42]} {RNA1509_24066} {RNA1310_21115, RNA1509_24066} {RNA1509_24066, RNA815_17056}
8. MligTC455_25437 6701 139.6 Mlig455_053783

Neo: Germline

Age: logFC(26M/2M)=0.151

Regeneration-upregulated BL: 1.592

Regeneration-enriched BL: 1.592

HSP90B1 0.953 - - - - 0.953 - Mlig455_053783 {REF} {Length: 3420} {Pfam: Hsp90 protein [PF00183.20, score=381.8]} {Human: ENSG00000166598, HSP90B1, heat shock protein 90 beta family member 1, [Score=360, Expect=2e-118]} {Mouse: ENSMUSG00000020048, Hsp90b1, heat shock protein 90, beta (Grp94), member 1, [Score=364, Expect=6e-120]} {Dmel: FBgn0039562, Gp93, Glycoprotein 93, [Score=322, Expect=6e-104]} {Celegans: WBGene00011480, enpl-1, Endoplasmin homolog, [Score=339, Expect=8e-112]} {Smed: dd_Smed_v6_758_1_1, dd_Smed_v6_758_1_1, [Score=351, Expect=2e-115]} {RNA1509_1985, RNA1509_4445, RNA1509_48304, RNA1509_48533, RNA1509_55621} {RNA1310_4489, RNA1509_1985, RNA1509_4445, RNA1509_48304, RNA1509_48533, RNA1509_55621} {RNA1509_1985, RNA1509_4445, RNA1509_48304, RNA1509_48533, RNA1509_55621, RNA815_1298.1}
9. MligTC455_50951 5451 113.55 Mlig455_010086

Neo: -

Age: -

Region-enriched R5: 1.116/0.00014

SSR2 0.953 - - - - 0.953 - Mlig455_010086 {REF} {Length: 1316} {TRANSSPLICED} {Pfam: Translocon-associated protein beta (TRAPB) [PF05753.16, score=172.0]} {Human: ENSG00000163479, SSR2, signal sequence receptor subunit 2, [RH, Score=164, Expect=4e-51]} {Mouse: ENSMUSG00000041355, Ssr2, signal sequence receptor, beta, [RH, Score=159, Expect=2e-49]} {Celegans: WBGene00020216, trap-2, Translocon-associated protein subunit beta, [Score=90.5, Expect=9e-23]} {Smed: dd_Smed_v6_1759_0_1, dd_Smed_v6_1759_0_1, [Score=153, Expect=3e-47]} {RNA1509_2868, RNA1509_6196} {RNA1310_18208.1, RNA1509_6196} {RNA1509_6196, RNA815_11531}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA