Data search
Results for MligTC455_45081
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_45081 | 317 | 6.60 | Mlig455_018497 | Neo: - Age: - Region-enriched R4: 2.407/0.01304 |
PQLC1 | Mlig455_018497 {REF} {Length: 2325} {Pfam: PQ loop repeat [PF04193.16, score=74.2]} {Human: ENSG00000122490, PQLC1, PQ loop repeat containing 1, [Score=197, Expect=7e-63]} {Mouse: ENSMUSG00000034006, Pqlc1, PQ loop repeat containing 1, [Score=192, Expect=5e-61]} {Dmel: FBgn0031897, CG13784, [Score=206, Expect=1e-66]} {Celegans: WBGene00011827, T19A6.1, [Score=168, Expect=1e-51]} {Smed: dd_Smed_v6_6419_0_1, dd_Smed_v6_6419_0_1, [Score=179, Expect=9e-57]} {RNA1509_32019, RNA1509_47747} {RNA1310_8439, RNA1509_47747} {RNA1509_47747, RNA815_18050} |
Cumulative graph for MligTC455_45081
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.639 | 3.239 | 0.17991 | 0.80842 | |
| RegionR2 | -0.035 | 3.239 | 0.86232 | 1.00000 | |
| RegionR3 | 0.687 | 3.239 | 0.41697 | 0.94186 | |
| RegionR4 | 2.407 | 3.239 | 0.00133 | 0.01304 | |
| RegionR5 | 1.449 | 3.239 | 0.02462 | 0.11251 | |
| RegionR6 | 0.402 | 3.239 | 0.64381 | 1.00000 | |
| RegionR7 | -0.721 | 3.239 | 0.97419 | 1.00000 | |
| RegionR8 | 1.448 | 3.239 | 0.13095 | 0.66294 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.314 | 3.239 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.548 | 3.239 | 0.20649 | 0.65370 | |
| RegenerationR3 | -0.295 | 3.239 | 0.53143 | 0.87299 | |
| RegenerationR4 | -0.455 | 3.239 | 0.36418 | 0.78968 | |
| RegenerationR5 | -0.185 | 3.239 | 0.65882 | 0.93541 | |
| RegenerationR6 | 0.254 | 3.239 | 0.62323 | 0.88288 | |
| RegenerationBL | 0.131 | 3.239 | 0.83717 | 1.00000 | |
| RegenerationTP | -0.455 | 3.239 | 0.55021 | 0.93299 |
Genes with expression patterns similar to MligTC455_45081
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_45081 | 317 | 6.6 | Mlig455_018497 | Neo: - Age: - Region-enriched R4: 2.407/0.01304 |
PQLC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018497 {REF} {Length: 2325} {Pfam: PQ loop repeat [PF04193.16, score=74.2]} {Human: ENSG00000122490, PQLC1, PQ loop repeat containing 1, [Score=197, Expect=7e-63]} {Mouse: ENSMUSG00000034006, Pqlc1, PQ loop repeat containing 1, [Score=192, Expect=5e-61]} {Dmel: FBgn0031897, CG13784, [Score=206, Expect=1e-66]} {Celegans: WBGene00011827, T19A6.1, [Score=168, Expect=1e-51]} {Smed: dd_Smed_v6_6419_0_1, dd_Smed_v6_6419_0_1, [Score=179, Expect=9e-57]} {RNA1509_32019, RNA1509_47747} {RNA1310_8439, RNA1509_47747} {RNA1509_47747, RNA815_18050} |
| 2. | MligTC455_20053 | 174 | 3.62 | Mlig455_034750 | Neo: - Age: - Region-enriched R5: 2.122/0.04969 |
1.706 | - | - | 0.953 | - | - | 0.753 | Mlig455_034750 {REF} {Length: 1010} {TRANSSPLICED} {RNA1509_57195} {RNA1310_35663, RNA1509_57195} {RNA1509_57195, RNA815_38287} | |
| 3. | MligTC455_39279 | 1090 | 22.7 | Mlig455_046264 | Neo: - Age: Up-Up-Down |
GLG1 | 0.97 | - | - | - | - | 0.970 | - | Mlig455_046264 {REF} {Length: 5262} {Pfam: Cysteine rich repeat [PF00839.19, score=394.7]} {Human: ENSG00000090863, GLG1, golgi glycoprotein 1, [RH, Score=628, Expect=0.0]} {Mouse: ENSMUSG00000003316, Glg1, golgi apparatus protein 1, [RH, Score=627, Expect=0.0]} {Dmel: FBgn0264561, Glg1, Golgi complex-localized glycoprotein 1, [RH, Score=432, Expect=4e-132]} {Celegans: WBGene00008800, F14E5.2, Golgi apparatus protein 1 homolog, [RH, Score=469, Expect=1e-145]} {Smed: dd_Smed_v6_1197_0_1, dd_Smed_v6_1197_0_1, [RH, Score=553, Expect=3e-177]} {RNA1509_1590, RNA1509_28053} {RNA1310_1251, RNA1509_28053} {RNA1509_28053, RNA815_364} |
| 4. | MligTC455_26404 | 488 | 10.16 | Mlig455_042132 | Neo: - Age: - Region-enriched R7: 1.883/0.00006 Regeneration-downregulated BL: -2.337 Regeneration-depleted BL: -2.337 |
LMAN1 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_042132 {REF} {Length: 4413} {Pfam: Legume-like lectin family [PF03388.15, score=197.9]; Bacterial lectin [PF18483.3, score=40.4]} {Human: ENSG00000074695, LMAN1, lectin, mannose binding 1, [RH, Score=224, Expect=2e-68]} {Mouse: ENSMUSG00000041891, Lman1, lectin, mannose-binding, 1, [RH, Score=232, Expect=3e-71]} {Dmel: FBgn0035909, ergic53, [RH, Score=267, Expect=5e-85]} {Celegans: WBGene00002070, ile-1, ERGIC-53-like protein; Intracellular LEctin, [RH, Score=240, Expect=5e-75]} {Smed: dd_Smed_v6_9447_0_1, dd_Smed_v6_9447_0_1, [RH, Score=208, Expect=3e-63]} {RNA1509_35021, RNA1509_7996} {RNA1310_4041.1, RNA1509_35021, RNA1509_7996} {RNA1509_35021, RNA1509_7996, RNA815_6626} |
| 5. | MligTC455_42892 | 1072 | 22.33 | Mlig455_048606, Mlig455_048684 | Neo: - Age: - |
C15orf40 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_048606 {REF} {Length: 617} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YggU family COG1872 [PF02594.18, score=79.0]} {Human: ENSG00000169609, C15orf40, chromosome 15 open reading frame 40, [RH, Score=70.5, Expect=2e-15]} {Mouse: ENSMUSG00000025102, 3110040N11Rik, RIKEN cDNA 3110040N11 gene, [RH, Score=75.1, Expect=9e-18]} {Dmel: FBgn0035415, CG14966, [RH, Score=75.9, Expect=4e-18]} {RNA1509_41684} {RNA1310_45572} {RNA815_31104.2} Mlig455_048684 {REF} {Length: 619} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YggU family COG1872 [PF02594.18, score=79.4]} {Human: ENSG00000169609, C15orf40, chromosome 15 open reading frame 40, [RH, Score=70.9, Expect=1e-15]} {Mouse: ENSMUSG00000025102, 3110040N11Rik, RIKEN cDNA 3110040N11 gene, [RH, Score=74.3, Expect=2e-17]} {Dmel: FBgn0035415, CG14966, [RH, Score=76.6, Expect=3e-18]} {RNA1509_41684} {RNA1310_45572, RNA1509_41684} {RNA1509_41684, RNA815_31104.2} |
| 6. | MligTC455_38467 | 215 | 4.47 | Mlig455_015264 | Neo: - Age: - |
IWS1 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_015264 {REF} {Length: 3282} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=39.0]; Cornifin (SPRR) family [PF02389.17, score=20.9]} {Human: ENSG00000163166, IWS1, IWS1, SUPT6H interacting protein, [RH, Score=281, Expect=3e-82]} {Mouse: ENSMUSG00000024384, Iws1, IWS1, SUPT6 interacting protein, [RH, Score=278, Expect=5e-82]} {Dmel: FBgn0030738, CG9915, [RH, Score=226, Expect=1e-62]} {Celegans: WBGene00008729, F13B12.1, IWS1-like protein, [RH, Score=194, Expect=9e-54]} {Smed: dd_Smed_v6_995_0_1, dd_Smed_v6_995_0_1, [RH, Score=200, Expect=2e-56]} {RNA1509_17975} {RNA1310_3895.1} {RNA815_2445.1} |
| 7. | MligTC455_45163 | 258 | 5.37 | Mlig455_005301 | Neo: - |
OTOP3 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_005301 {REF} {Length: 3027} {TRANSSPLICED} {Pfam: Otopetrin [PF03189.15, score=236.5]} {Human: ENSG00000182938, OTOP3, otopetrin 3, [RH, Score=67.4, Expect=5e-11]} {Mouse: ENSMUSG00000018862, Otop3, otopetrin 3, [RH, Score=66.6, Expect=6e-11]} {Dmel: FBgn0259150, CG42265, [Score=188, Expect=1e-49]} {Celegans: WBGene00017449, otpl-3, OToPetrin-Like, [RH, Score=139, Expect=8e-35]} {Smed: dd_Smed_v6_13612_0_4, dd_Smed_v6_13612_0_4, [RH, Score=318, Expect=2e-99]} {RNA1509_58676, RNA1509_717} {RNA1310_7130.2, RNA1509_58676} {RNA1509_58676, RNA815_6393} |
| 8. | MligTC455_20425 | 832 | 17.32 | Mlig455_052541 | Neo: - Age: Up-Down-Up |
TMEM189-UBE2V1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_052541 {REF} {Length: 1998} {Pfam: Lipid desaturase domain [PF10520.11, score=53.0]} {Human: ENSG00000124208, TMEM189-UBE2V1, TMEM189-UBE2V1 readthrough, [Score=116, Expect=2e-31]; ENSG00000240849, TMEM189, transmembrane protein 189, [Score=116, Expect=3e-32]} {Mouse: ENSMUSG00000089739, Gm20431, predicted gene 20431, [Score=114, Expect=9e-31]; ENSMUSG00000090213, Tmem189, transmembrane protein 189, [Score=113, Expect=2e-31]} {Dmel: FBgn0032850, Kua, [Score=121, Expect=2e-34]} {Celegans: WBGene00013136, Y53C10A.5, [Score=120, Expect=4e-34]} {Smed: dd_Smed_v6_3344_0_1, dd_Smed_v6_3344_0_1, [Score=111, Expect=8e-31]} {RNA1509_12466} {RNA1310_13079, RNA1509_12466} {RNA1509_12466, RNA815_4790.1} |
Berezikov Lab - 2020-2021 © ERIBA