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Results for MligTC455_43004

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43004 505 10.52 Mlig455_029263, Mlig455_035648

Neo: -

Age: -

PMS1

Mlig455_029263 {REF} {Length: 2797} {TRANSSPLICED} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=52.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=31.4]} {Human: ENSG00000064933, PMS1, PMS1 homolog 1, mismatch repair system component, [RH, Score=221, Expect=2e-60]} {Mouse: ENSMUSG00000026098, Pms1, PMS1 homolog 1, mismatch repair system component, [RH, Score=214, Expect=3e-59]} {Dmel: FBgn0011660, Pms2, [Score=121, Expect=6e-28]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [Score=163, Expect=2e-41]} {Smed: dd_Smed_v6_15640_0_1, dd_Smed_v6_15640_0_1, [RH, Score=175, Expect=8e-46]} {RNA1509_18356} {RNA1310_9434.1} {RNA815_16461}

Mlig455_035648 {REF} {Length: 2529} {TRANSSPLICED} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=52.3]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=31.7]; Domain of unknown function (DUF4045) [PF13254.8, score=20.2]; Topoisomerase II-associated protein PAT1 [PF09770.11, score=18.6]} {Human: ENSG00000064933, PMS1, PMS1 homolog 1, mismatch repair system component, [RH, Score=224, Expect=7e-62]} {Mouse: ENSMUSG00000026098, Pms1, PMS1 homolog 1, mismatch repair system component, [RH, Score=216, Expect=9e-61]} {Dmel: FBgn0011659, Mlh1, [Score=127, Expect=3e-30]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [Score=163, Expect=7e-42]} {Smed: dd_Smed_v6_15640_0_1, dd_Smed_v6_15640_0_1, [RH, Score=177, Expect=6e-47]} {RNA1509_18356} {RNA1310_9434.1, RNA1509_18356} {RNA1509_18356, RNA815_16461}

Cumulative graph for MligTC455_43004

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.233 3.829 0.42683 1.00000
RegionR2 0.686 3.829 0.30360 0.69384
RegionR3 -0.614 3.829 0.28412 0.82693
RegionR4 -0.894 3.829 0.18485 0.45711
RegionR5 0.968 3.829 0.03147 0.13420
RegionR6 0.218 3.829 0.67830 1.00000
RegionR7 1.032 3.829 0.08246 0.55274
RegionR8 -0.162 3.829 0.85392 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.145 3.829 0.36172 1.00000
RegenerationR2 -0.019 3.829 0.97410 1.00000
RegenerationR3 0.754 3.829 0.24945 0.68328
RegenerationR4 0.759 3.829 0.26250 0.71022
RegenerationR5 0.14 3.829 0.80334 0.98918
RegenerationR6 0.618 3.829 0.31228 0.65989
RegenerationBL 1.604 3.829 0.00962 0.09846
RegenerationTP -0.641 3.829 0.44606 0.86479


Genes with expression patterns similar to MligTC455_43004

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43004 505 10.52 Mlig455_029263, Mlig455_035648

Neo: -

Age: -

PMS1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_029263 {REF} {Length: 2797} {TRANSSPLICED} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=52.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=31.4]} {Human: ENSG00000064933, PMS1, PMS1 homolog 1, mismatch repair system component, [RH, Score=221, Expect=2e-60]} {Mouse: ENSMUSG00000026098, Pms1, PMS1 homolog 1, mismatch repair system component, [RH, Score=214, Expect=3e-59]} {Dmel: FBgn0011660, Pms2, [Score=121, Expect=6e-28]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [Score=163, Expect=2e-41]} {Smed: dd_Smed_v6_15640_0_1, dd_Smed_v6_15640_0_1, [RH, Score=175, Expect=8e-46]} {RNA1509_18356} {RNA1310_9434.1} {RNA815_16461}

Mlig455_035648 {REF} {Length: 2529} {TRANSSPLICED} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=52.3]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=31.7]; Domain of unknown function (DUF4045) [PF13254.8, score=20.2]; Topoisomerase II-associated protein PAT1 [PF09770.11, score=18.6]} {Human: ENSG00000064933, PMS1, PMS1 homolog 1, mismatch repair system component, [RH, Score=224, Expect=7e-62]} {Mouse: ENSMUSG00000026098, Pms1, PMS1 homolog 1, mismatch repair system component, [RH, Score=216, Expect=9e-61]} {Dmel: FBgn0011659, Mlh1, [Score=127, Expect=3e-30]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [Score=163, Expect=7e-42]} {Smed: dd_Smed_v6_15640_0_1, dd_Smed_v6_15640_0_1, [RH, Score=177, Expect=6e-47]} {RNA1509_18356} {RNA1310_9434.1, RNA1509_18356} {RNA1509_18356, RNA815_16461}
2. MligTC455_41163 770 16.05 Mlig455_025270, Mlig455_025298

Neo: Int S/G2/M

Age: Up-Down-Down

NFYA 1.744 - - - - 0.778 0.966

Mlig455_025270 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B [PF02045.17, score=98.9]} {Human: ENSG00000001167, NFYA, nuclear transcription factor Y subunit alpha, [RH, Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000023994, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]; ENSMUSG00000115906, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]} {Dmel: FBgn0035993, Nf-YA, Nuclear factor Y-box A, [RH, Score=104, Expect=5e-26]} {Celegans: WBGene00011614, nfya-1, Nuclear transcription Factor Y, A (Alpha) subunit, [RH, Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_8585_0_1, dd_Smed_v6_8585_0_1, [RH, Score=124, Expect=6e-36]} {RNA1509_29833} {RNA1310_34280} {RNA815_9129}

Mlig455_025298 {REF} {Length: 1916} {TRANSSPLICED} {Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B [PF02045.17, score=98.9]} {Human: ENSG00000001167, NFYA, nuclear transcription factor Y subunit alpha, [RH, Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000023994, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]; ENSMUSG00000115906, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]} {Dmel: FBgn0035993, Nf-YA, Nuclear factor Y-box A, [RH, Score=104, Expect=5e-26]} {Celegans: WBGene00011614, nfya-1, Nuclear transcription Factor Y, A (Alpha) subunit, [RH, Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_8585_0_1, dd_Smed_v6_8585_0_1, [RH, Score=124, Expect=6e-36]} {RNA1509_29833} {RNA1310_34280} {RNA815_9129}
3. MligTC455_51441 701 14.6 Mlig455_041216, Mlig455_041236

Neo: -

Age: Down-Up-Up

1.664 - 0.714 - 0.950 - -

Mlig455_041216 {REF} {Length: 891} {TRANSSPLICED} {Pfam: Cytoplasmic polyadenylation element-binding protein ZZ domain [PF16366.7, score=20.3]} {RNA1509_54662} {RNA1310_41949.1} {RNA815_21260}

Mlig455_041236 {REF} {Length: 891} {TRANSSPLICED} {Pfam: Cytoplasmic polyadenylation element-binding protein ZZ domain [PF16366.7, score=19.7]} {RNA1509_54662, RNA1509_54947} {RNA1310_41949.1, RNA1509_54662, RNA1509_54947} {RNA1509_54662, RNA1509_54947, RNA815_21260}
4. MligTC455_25118 800 16.66 Mlig455_045721

Neo: Int S/G2/M

Age: -

SIL1 0.975 - - - 0.975 - - Mlig455_045721 {REF} {Length: 2078} {TRANSSPLICED} {Pfam: Nucleotide exchange factor Fes1 [PF08609.12, score=22.4]} {Human: ENSG00000120725, SIL1, SIL1 nucleotide exchange factor, [RH, Score=191, Expect=1e-54]} {Mouse: ENSMUSG00000024357, Sil1, endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae), [RH, Score=189, Expect=5e-54]} {Dmel: FBgn0039296, CG10420, [RH, Score=131, Expect=3e-33]} {Smed: dd_Smed_v6_5534_0_1, dd_Smed_v6_5534_0_1, [RH, Score=203, Expect=5e-60]} {RNA1509_50296, RNA1509_8971} {RNA1310_12636, RNA1509_50296, RNA1509_8971} {RNA1509_50296, RNA1509_8971, RNA815_4540}
5. MligTC455_30363 240 5 Mlig455_011101

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.846

0.973 - - - - 0.973 - Mlig455_011101 {REF} {Length: 2013} {NoTransDecoderORF} {RNA1509_33897} {RNA1310_18647} {RNA815_14645}
6. MligTC455_16468 376 7.84 Mlig455_041552, Mlig455_051931

Neo: -

Age: -

Region-enriched R5: 2.287/0.02983

0.966 - - 0.966 - - -

Mlig455_041552 {REF} {Length: 2431} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=42.8]; Acetyltransferase (GNAT) domain [PF13673.9, score=32.7]; Acetyltransferase (GNAT) domain [PF13508.9, score=28.4]} {Mouse: ENSMUSG00000069835, Sat2, spermidine/spermine N1-acetyl transferase 2, [RH, Score=104, Expect=2e-26]} {Celegans: WBGene00008408, D2023.4, [RH, Score=52.0, Expect=6e-08]} {RNA1509_25747, RNA1509_50582} {RNA1310_19486, RNA1509_25747, RNA1509_50582} {RNA1509_25747, RNA1509_50582, RNA815_8115}

Mlig455_051931 {REF} {Length: 3387} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=42.7]; Acetyltransferase (GNAT) domain [PF13673.9, score=32.7]; Acetyltransferase (GNAT) domain [PF13508.9, score=28.4]} {Mouse: ENSMUSG00000069835, Sat2, spermidine/spermine N1-acetyl transferase 2, [RH, Score=104, Expect=2e-26]} {Celegans: WBGene00008408, D2023.4, [RH, Score=52.0, Expect=6e-08]} {RNA1509_25747} {RNA1310_19486} {RNA815_8115}
7. MligTC455_49320 971 20.23 Mlig455_019078, Mlig455_064290

Neo: Irradiation

Age: -

Region-enriched R5: 1.946/0.00002

0.961 - - - - - 0.961

Mlig455_019078 {REF} {Length: 3238} {Mouse: ENSMUSG00000040033, Stat2, signal transducer and activator of transcription 2, [Score=50.1, Expect=8e-06]} {Smed: dd_Smed_v6_2170_0_1, dd_Smed_v6_2170_0_1, [RH, Score=197, Expect=2e-55]} {RNA1509_14513} {RNA1310_10976.1, RNA1509_14513} {RNA1509_14513, RNA815_24594}

Mlig455_064290 {REF} {Length: 2997} {Smed: dd_Smed_v6_2170_0_1, dd_Smed_v6_2170_0_1, [RH, Score=197, Expect=2e-55]} {RNA1509_14513, RNA1509_46345} {RNA1310_10976.1, RNA1509_46345} {RNA1509_46345, RNA815_24594}
8. MligTC455_40108 611 12.73 Mlig455_006089, Mlig455_006117

Neo: Irradiation

Age: logFC(26M/2M)=0.250

Region-enriched R2: 4.974/0.00156
Region-enriched R5: 4.412/0.00000
Region-enriched R6: 3.192/0.02354

TRPM1 0.96 - - - - - 0.960

Mlig455_006089 {REF} {Length: 4692} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=31.3]; Ankyrin repeats (3 copies) [PF12796.9, score=29.5]; Ankyrin repeat [PF00023.32, score=25.3]; Ankyrin repeat [PF13606.8, score=20.5]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=70.9, Expect=1e-11]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=69.3, Expect=3e-11]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=65.1, Expect=5e-10]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=53.1, Expect=2e-06]} {Smed: dd_Smed_v6_15098_0_1, dd_Smed_v6_15098_0_1, [Score=64.3, Expect=4e-10]} {RNA1509_11721, RNA1509_46566, RNA1509_51297} {RNA1310_4559, RNA1509_11721, RNA1509_46566, RNA1509_51297} {RNA1509_11721, RNA1509_46566, RNA1509_51297, RNA815_3837}

Mlig455_006117 {REF} {Length: 5578} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=30.8]; Ankyrin repeats (3 copies) [PF12796.9, score=30.1]; Ankyrin repeat [PF00023.32, score=25.5]; Ankyrin repeat [PF13606.8, score=23.5]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=70.9, Expect=1e-11]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=69.3, Expect=3e-11]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=65.5, Expect=4e-10]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=52.8, Expect=2e-06]} {Smed: dd_Smed_v6_15098_0_1, dd_Smed_v6_15098_0_1, [Score=65.5, Expect=2e-10]} {RNA1509_51297} {RNA1310_4559} {RNA815_3837}
9. MligTC455_50168 391 8.14 Mlig455_013474

Neo: Irradiation

Age: -

Region-specific R5: 4.044

Region-enriched R5: 3.302/0.00000

0.96 - - - - - 0.960 Mlig455_013474 {REF} {Length: 2361} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=25.8]} {RNA1509_12027} {RNA1310_9091} {RNA815_3684}
10. MligTC455_51175 916 19.08 Mlig455_024766, Mlig455_066113

Neo: Irradiation

Age: -

Region-enriched R5: 2.458/0.00000

WEE2 0.958 - - - - - 0.958

Mlig455_024766 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=107.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.0]} {Human: ENSG00000263042, WEE2, WEE1 homolog 2, [Score=112, Expect=9e-26]; ENSG00000214102, WEE2, WEE1 homolog 2, [Score=112, Expect=9e-26]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [RH, Score=117, Expect=2e-27]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [RH, Score=115, Expect=9e-27]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=75.1, Expect=7e-14]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [Score=83.6, Expect=6e-17]} {RNA1509_41627, RNA1509_55110} {RNA1310_9033, RNA1509_41627} {RNA1509_41627, RNA815_4229.1}

Mlig455_066113 {REF} {Length: 2412} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=90.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=60.1]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.0]} {Human: ENSG00000263042, WEE2, WEE1 homolog 2, [Score=100, Expect=9e-22]; ENSG00000214102, WEE2, WEE1 homolog 2, [Score=100, Expect=9e-22]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [Score=103, Expect=5e-23]} {Dmel: FBgn0040298, Myt1, [Score=83.6, Expect=1e-16]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=62.4, Expect=5e-10]} {Smed: dd_Smed_v6_12461_0_1, dd_Smed_v6_12461_0_1, [Score=73.2, Expect=5e-14]} {RNA1509_55110} {RNA1310_9033} {RNA815_4229.1}
11. MligTC455_20614 113 2.36 Mlig455_030437

Neo: -

Age: -

0.952 - - 0.952 - - - Mlig455_030437 {REF} {Length: 2341} {RNA1509_24885} {RNA1310_3500} {RNA815_2996.1}
12. MligTC455_37043 353 7.35 Mlig455_069044

Neo: Int S/G2/M

Age: -

RFC5 0.951 - - - - - 0.951 Mlig455_069044 {REF} {Length: 2372} {TRANSSPLICED} {Pfam: Replication factor C C-terminal domain [PF08542.13, score=59.1]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=57.0]; DNA polymerase III, delta subunit [PF13177.8, score=52.5]; Rad17 P-loop domain [PF03215.17, score=28.7]; AAA domain [PF13401.8, score=23.9]; AAA C-terminal domain [PF16193.7, score=23.4]; AAA ATPase domain [PF13191.8, score=21.9]; AAA domain [PF13173.8, score=19.4]; AAA domain [PF13604.8, score=18.9]} {Human: ENSG00000111445, RFC5, replication factor C subunit 5, [RH, Score=411, Expect=1e-143]} {Mouse: ENSMUSG00000029363, Rfc5, replication factor C (activator 1) 5, [RH, Score=413, Expect=8e-145]} {Dmel: FBgn0032244, RfC3, Replication factor C subunit 3, [RH, Score=379, Expect=1e-131]} {Celegans: WBGene00018409, F44B9.8, Probable replication factor C subunit 5, [RH, Score=327, Expect=1e-110]} {Smed: dd_Smed_v6_5504_0_1, dd_Smed_v6_5504_0_1, [RH, Score=359, Expect=6e-124]} {RNA1509_20013} {RNA1310_24005, RNA1509_20013} {RNA1509_20013, RNA815_8700}
13. MligTC455_15393 440 9.16 Mlig455_043266, Mlig455_043292

Neo: -

Age: -

PLA2G7 0.95 - - - - 0.950 -

Mlig455_043266 {REF} {Length: 3292} {Pfam: Platelet-activating factor acetylhydrolase, isoform II [PF03403.15, score=225.8]; Chlorophyllase enzyme [PF12740.9, score=30.9]; Serine aminopeptidase, S33 [PF12146.10, score=23.7]; Chlorophyllase [PF07224.13, score=21.1]; Alpha/beta hydrolase family [PF12697.9, score=20.7]; Phospholipase/Carboxylesterase [PF02230.18, score=20.6]} {Human: ENSG00000146070, PLA2G7, phospholipase A2 group VII, [Score=153, Expect=2e-41]; ENSG00000158006, PAFAH2, platelet activating factor acetylhydrolase 2, [Score=148, Expect=5e-40]} {Mouse: ENSMUSG00000037366, Pafah2, platelet-activating factor acetylhydrolase 2, [Score=150, Expect=9e-41]; ENSMUSG00000023913, Pla2g7, phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma), [Score=147, Expect=2e-39]} {Celegans: WBGene00003907, paf-2, Platelet-activating factor acetylhydrolase homolog 2, [Score=139, Expect=4e-37]} {RNA1509_7989} {RNA1310_4492.3} {RNA815_3864.1}

Mlig455_043292 {REF} {Length: 3289} {Pfam: Platelet-activating factor acetylhydrolase, isoform II [PF03403.15, score=225.9]; Chlorophyllase enzyme [PF12740.9, score=30.9]; Serine aminopeptidase, S33 [PF12146.10, score=23.7]; Chlorophyllase [PF07224.13, score=21.6]; Alpha/beta hydrolase family [PF12697.9, score=20.9]; Phospholipase/Carboxylesterase [PF02230.18, score=20.6]} {Human: ENSG00000146070, PLA2G7, phospholipase A2 group VII, [Score=153, Expect=2e-41]; ENSG00000158006, PAFAH2, platelet activating factor acetylhydrolase 2, [Score=149, Expect=3e-40]} {Mouse: ENSMUSG00000037366, Pafah2, platelet-activating factor acetylhydrolase 2, [Score=151, Expect=6e-41]; ENSMUSG00000023913, Pla2g7, phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma), [Score=147, Expect=2e-39]} {Celegans: WBGene00003907, paf-2, Platelet-activating factor acetylhydrolase homolog 2, [Score=137, Expect=2e-36]} {RNA1509_7989} {RNA1310_4492.3} {RNA815_3864.1}

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