Data search
Results for MligTC455_41163
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41163 | 770 | 16.05 | Mlig455_025270, Mlig455_025298 | Neo: Int S/G2/M Age: Up-Down-Down |
NFYA | Mlig455_025270 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B [PF02045.17, score=98.9]} {Human: ENSG00000001167, NFYA, nuclear transcription factor Y subunit alpha, [RH, Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000023994, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]; ENSMUSG00000115906, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]} {Dmel: FBgn0035993, Nf-YA, Nuclear factor Y-box A, [RH, Score=104, Expect=5e-26]} {Celegans: WBGene00011614, nfya-1, Nuclear transcription Factor Y, A (Alpha) subunit, [RH, Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_8585_0_1, dd_Smed_v6_8585_0_1, [RH, Score=124, Expect=6e-36]} {RNA1509_29833} {RNA1310_34280} {RNA815_9129} Mlig455_025298 {REF} {Length: 1916} {TRANSSPLICED} {Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B [PF02045.17, score=98.9]} {Human: ENSG00000001167, NFYA, nuclear transcription factor Y subunit alpha, [RH, Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000023994, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]; ENSMUSG00000115906, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]} {Dmel: FBgn0035993, Nf-YA, Nuclear factor Y-box A, [RH, Score=104, Expect=5e-26]} {Celegans: WBGene00011614, nfya-1, Nuclear transcription Factor Y, A (Alpha) subunit, [RH, Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_8585_0_1, dd_Smed_v6_8585_0_1, [RH, Score=124, Expect=6e-36]} {RNA1509_29833} {RNA1310_34280} {RNA815_9129} |
Cumulative graph for MligTC455_41163
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.763 | 4.409 | 0.38844 | 1.00000 | |
| RegionR2 | -0.214 | 4.409 | 0.67566 | 1.00000 | |
| RegionR3 | -1.062 | 4.409 | 0.01197 | 0.17252 | |
| RegionR4 | 1.175 | 4.409 | 0.00929 | 0.05779 | |
| RegionR5 | 0.646 | 4.409 | 0.05176 | 0.19233 | |
| RegionR6 | -0.2 | 4.409 | 0.60056 | 1.00000 | |
| RegionR7 | -0.633 | 4.409 | 0.21603 | 0.83370 | |
| RegionR8 | -0.475 | 4.409 | 0.42790 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.509 | 4.409 | 0.04170 | 0.67581 | |
| RegenerationR2 | -0.439 | 4.409 | 0.33215 | 0.76878 | |
| RegenerationR3 | 0.046 | 4.409 | 0.93717 | 1.00000 | |
| RegenerationR4 | -1.419 | 4.409 | 0.00346 | 0.07904 | |
| RegenerationR5 | -0.116 | 4.409 | 0.78959 | 0.98521 | |
| RegenerationR6 | 0.209 | 4.409 | 0.66622 | 0.90658 | |
| RegenerationBL | 0.145 | 4.409 | 0.80432 | 1.00000 | |
| RegenerationTP | -1.776 | 4.409 | 0.02376 | 0.26154 |
Genes with expression patterns similar to MligTC455_41163
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41163 | 770 | 16.05 | Mlig455_025270, Mlig455_025298 | Neo: Int S/G2/M Age: Up-Down-Down |
NFYA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_025270 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B [PF02045.17, score=98.9]} {Human: ENSG00000001167, NFYA, nuclear transcription factor Y subunit alpha, [RH, Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000023994, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]; ENSMUSG00000115906, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]} {Dmel: FBgn0035993, Nf-YA, Nuclear factor Y-box A, [RH, Score=104, Expect=5e-26]} {Celegans: WBGene00011614, nfya-1, Nuclear transcription Factor Y, A (Alpha) subunit, [RH, Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_8585_0_1, dd_Smed_v6_8585_0_1, [RH, Score=124, Expect=6e-36]} {RNA1509_29833} {RNA1310_34280} {RNA815_9129} Mlig455_025298 {REF} {Length: 1916} {TRANSSPLICED} {Pfam: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B [PF02045.17, score=98.9]} {Human: ENSG00000001167, NFYA, nuclear transcription factor Y subunit alpha, [RH, Score=123, Expect=5e-33]} {Mouse: ENSMUSG00000023994, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]; ENSMUSG00000115906, Nfya, nuclear transcription factor-Y alpha, [RH, Score=123, Expect=3e-33]} {Dmel: FBgn0035993, Nf-YA, Nuclear factor Y-box A, [RH, Score=104, Expect=5e-26]} {Celegans: WBGene00011614, nfya-1, Nuclear transcription Factor Y, A (Alpha) subunit, [RH, Score=81.3, Expect=1e-17]} {Smed: dd_Smed_v6_8585_0_1, dd_Smed_v6_8585_0_1, [RH, Score=124, Expect=6e-36]} {RNA1509_29833} {RNA1310_34280} {RNA815_9129} |
| 2. | MligTC455_43004 | 505 | 10.52 | Mlig455_029263, Mlig455_035648 | Neo: - Age: - |
PMS1 | 1.744 | - | - | - | - | 0.778 | 0.966 | Mlig455_029263 {REF} {Length: 2797} {TRANSSPLICED} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=52.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=31.4]} {Human: ENSG00000064933, PMS1, PMS1 homolog 1, mismatch repair system component, [RH, Score=221, Expect=2e-60]} {Mouse: ENSMUSG00000026098, Pms1, PMS1 homolog 1, mismatch repair system component, [RH, Score=214, Expect=3e-59]} {Dmel: FBgn0011660, Pms2, [Score=121, Expect=6e-28]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [Score=163, Expect=2e-41]} {Smed: dd_Smed_v6_15640_0_1, dd_Smed_v6_15640_0_1, [RH, Score=175, Expect=8e-46]} {RNA1509_18356} {RNA1310_9434.1} {RNA815_16461} Mlig455_035648 {REF} {Length: 2529} {TRANSSPLICED} {Pfam: DNA mismatch repair protein, C-terminal domain [PF01119.21, score=52.3]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=31.7]; Domain of unknown function (DUF4045) [PF13254.8, score=20.2]; Topoisomerase II-associated protein PAT1 [PF09770.11, score=18.6]} {Human: ENSG00000064933, PMS1, PMS1 homolog 1, mismatch repair system component, [RH, Score=224, Expect=7e-62]} {Mouse: ENSMUSG00000026098, Pms1, PMS1 homolog 1, mismatch repair system component, [RH, Score=216, Expect=9e-61]} {Dmel: FBgn0011659, Mlh1, [Score=127, Expect=3e-30]} {Celegans: WBGene00004064, pms-2, PMS (Post Meiotic Segregation) family, [Score=163, Expect=7e-42]} {Smed: dd_Smed_v6_15640_0_1, dd_Smed_v6_15640_0_1, [RH, Score=177, Expect=6e-47]} {RNA1509_18356} {RNA1310_9434.1, RNA1509_18356} {RNA1509_18356, RNA815_16461} |
| 3. | MligTC455_51175 | 916 | 19.08 | Mlig455_024766, Mlig455_066113 | Neo: Irradiation Age: - Region-enriched R5: 2.458/0.00000 |
WEE2 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_024766 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=107.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.0]} {Human: ENSG00000263042, WEE2, WEE1 homolog 2, [Score=112, Expect=9e-26]; ENSG00000214102, WEE2, WEE1 homolog 2, [Score=112, Expect=9e-26]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [RH, Score=117, Expect=2e-27]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [RH, Score=115, Expect=9e-27]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=75.1, Expect=7e-14]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [Score=83.6, Expect=6e-17]} {RNA1509_41627, RNA1509_55110} {RNA1310_9033, RNA1509_41627} {RNA1509_41627, RNA815_4229.1} Mlig455_066113 {REF} {Length: 2412} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=90.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=60.1]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.0]} {Human: ENSG00000263042, WEE2, WEE1 homolog 2, [Score=100, Expect=9e-22]; ENSG00000214102, WEE2, WEE1 homolog 2, [Score=100, Expect=9e-22]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [Score=103, Expect=5e-23]} {Dmel: FBgn0040298, Myt1, [Score=83.6, Expect=1e-16]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=62.4, Expect=5e-10]} {Smed: dd_Smed_v6_12461_0_1, dd_Smed_v6_12461_0_1, [Score=73.2, Expect=5e-14]} {RNA1509_55110} {RNA1310_9033} {RNA815_4229.1} |
| 4. | MligTC455_40108 | 611 | 12.73 | Mlig455_006089, Mlig455_006117 | Neo: Irradiation Age: logFC(26M/2M)=0.250 Region-enriched R2: 4.974/0.00156 |
TRPM1 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_006089 {REF} {Length: 4692} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=31.3]; Ankyrin repeats (3 copies) [PF12796.9, score=29.5]; Ankyrin repeat [PF00023.32, score=25.3]; Ankyrin repeat [PF13606.8, score=20.5]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=70.9, Expect=1e-11]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=69.3, Expect=3e-11]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=65.1, Expect=5e-10]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=53.1, Expect=2e-06]} {Smed: dd_Smed_v6_15098_0_1, dd_Smed_v6_15098_0_1, [Score=64.3, Expect=4e-10]} {RNA1509_11721, RNA1509_46566, RNA1509_51297} {RNA1310_4559, RNA1509_11721, RNA1509_46566, RNA1509_51297} {RNA1509_11721, RNA1509_46566, RNA1509_51297, RNA815_3837} Mlig455_006117 {REF} {Length: 5578} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=30.8]; Ankyrin repeats (3 copies) [PF12796.9, score=30.1]; Ankyrin repeat [PF00023.32, score=25.5]; Ankyrin repeat [PF13606.8, score=23.5]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=70.9, Expect=1e-11]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=69.3, Expect=3e-11]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=65.5, Expect=4e-10]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=52.8, Expect=2e-06]} {Smed: dd_Smed_v6_15098_0_1, dd_Smed_v6_15098_0_1, [Score=65.5, Expect=2e-10]} {RNA1509_51297} {RNA1310_4559} {RNA815_3837} |
| 5. | MligTC455_44331 | 570 | 11.87 | Mlig455_035849 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.578/0.00000 |
0.963 | - | - | - | - | - | 0.963 | Mlig455_035849 {REF} {Length: 2726} {TRANSSPLICED} {RNA1509_14060, RNA1509_35238} {RNA1310_9559, RNA1509_35238} {RNA1509_35238, RNA815_5589} | |
| 6. | MligTC455_45029 | 798 | 16.63 | Mlig455_005222 | Neo: Irradiation Age: - Region-enriched R5: 1.361/0.00000 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_005222 {REF} {Length: 889} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11945} {RNA1310_3516, RNA1509_11945} {RNA1509_11945, RNA815_18821.1} | |
| 7. | MligTC455_52733 | 906 | 18.87 | Mlig455_034774 | Neo: Irradiation Age: - Region-specific R5: 3.313 Region-enriched R5: 2.861/0.00000 |
ATXN7L3 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_034774 {REF} {Length: 1133} {TRANSSPLICED} {Pfam: Sgf11 (transcriptional regulation protein) [PF08209.13, score=52.1]} {Human: ENSG00000087152, ATXN7L3, ataxin 7 like 3, [Score=62.4, Expect=1e-11]} {Mouse: ENSMUSG00000059995, Atxn7l3, ataxin 7-like 3, [Score=62.4, Expect=1e-11]} {Dmel: FBgn0036804, Sgf11, SAGA associated factor 11kDa, [Score=58.9, Expect=4e-11]} {RNA1509_9359} {RNA1310_31276, RNA1509_9359} {RNA1509_9359, RNA815_16452} |
| 8. | MligTC455_39017 | 222 | 4.63 | Mlig455_033445 | Neo: Int S/G2/M Age: - |
TCEA2 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_033445 {REF} {Length: 1713} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=114.2]; Transcription factor S-II (TFIIS) [PF01096.20, score=70.2]; TFIIS helical bundle-like domain [PF08711.13, score=33.7]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [RH, Score=257, Expect=3e-84]; ENSG00000187735, TCEA1, transcription elongation factor A1, [RH, Score=252, Expect=2e-82]} {Mouse: ENSMUSG00000033813, Tcea1, transcription elongation factor A (SII) 1, [RH, Score=247, Expect=2e-80]; ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [RH, Score=244, Expect=2e-79]; ENSMUSG00000001604, Tcea3, transcription elongation factor A (SII), 3, [RH, Score=237, Expect=4e-76]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [RH, Score=245, Expect=1e-79]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [RH, Score=213, Expect=2e-67]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [RH, Score=251, Expect=5e-82]} {RNA1509_7459} {RNA1310_7696} {RNA815_8604} |