TomoSeq data search

Data search

Results for MligTC455_43054

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43054

311

6.48

Mlig455_066450

Neo: -

Age: logFC(26M/2M)=0.826

PGP

Mlig455_066450 {REF} {Length: 2583} {Pfam: Tetraspanin family [PF00335.22, score=119.3]; Haloacid dehalogenase-like hydrolase [PF13344.8, score=94.9]; HAD-hyrolase-like [PF13242.8, score=64.3]; haloacid dehalogenase-like hydrolase [PF00702.28, score=23.7]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=21.5]} {Human: ENSG00000184207, PGP, phosphoglycolate phosphatase, [RH, Score=148, Expect=1e-39]} {Mouse: ENSMUSG00000043445, Pgp, phosphoglycolate phosphatase, [RH, Score=152, Expect=4e-41]} {Dmel: FBgn0036760, CG5567, [RH, Score=132, Expect=3e-34]} {Celegans: WBGene00016892, C53A3.2, [RH, Score=161, Expect=1e-44]} {Smed: dd_Smed_v6_11063_0_1, dd_Smed_v6_11063_0_1, [RH, Score=179, Expect=3e-52]} {RNA1509_23273} {RNA1310_30232} {RNA815_13107.1}

Cumulative graph for MligTC455_43054

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.029	3.262	0.27692	0.92786
RegionR2	0.371	3.262	0.61603	0.96220
RegionR3	0.356	3.262	0.55044	1.00000
RegionR4	0.904	3.262	0.16748	0.42935
RegionR5	0.571	3.262	0.29010	0.62150
RegionR6	0.842	3.262	0.15749	0.70704
RegionR7	-0.272	3.262	0.74392	1.00000
RegionR8	-0.742	3.262	0.48711	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.354	3.262	0.48746	1.00000
RegenerationR2	0.526	3.262	0.35959	0.78852
RegenerationR3	0.204	3.262	0.74955	0.96466
RegenerationR4	0.278	3.262	0.66626	0.94083
RegenerationR5	0.254	3.262	0.65663	0.93445
RegenerationR6	0.284	3.262	0.63896	0.89245
RegenerationBL	0.705	3.262	0.34433	0.71126
RegenerationTP	0.962	3.262	0.27060	0.71887

Genes with expression patterns similar to MligTC455_43054

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43054	311	6.48	Mlig455_066450	Neo: - Age: logFC(26M/2M)=0.826	PGP	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_066450 {REF} {Length: 2583} {Pfam: Tetraspanin family [PF00335.22, score=119.3]; Haloacid dehalogenase-like hydrolase [PF13344.8, score=94.9]; HAD-hyrolase-like [PF13242.8, score=64.3]; haloacid dehalogenase-like hydrolase [PF00702.28, score=23.7]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=21.5]} {Human: ENSG00000184207, PGP, phosphoglycolate phosphatase, [RH, Score=148, Expect=1e-39]} {Mouse: ENSMUSG00000043445, Pgp, phosphoglycolate phosphatase, [RH, Score=152, Expect=4e-41]} {Dmel: FBgn0036760, CG5567, [RH, Score=132, Expect=3e-34]} {Celegans: WBGene00016892, C53A3.2, [RH, Score=161, Expect=1e-44]} {Smed: dd_Smed_v6_11063_0_1, dd_Smed_v6_11063_0_1, [RH, Score=179, Expect=3e-52]} {RNA1509_23273} {RNA1310_30232} {RNA815_13107.1}
2.	MligTC455_43052	253	5.28	Mlig455_020081	Neo: - Age: - Region-enriched R4: 2.109/0.02731	PGP	4.545	0.746	-	0.970	0.899	0.986	0.944	Mlig455_020081 {REF} {Length: 1205} {TRANSSPLICED} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=96.8]; HAD-hyrolase-like [PF13242.8, score=65.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=26.2]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=24.2]} {Human: ENSG00000184207, PGP, phosphoglycolate phosphatase, [RH, Score=148, Expect=7e-42]} {Mouse: ENSMUSG00000043445, Pgp, phosphoglycolate phosphatase, [RH, Score=152, Expect=2e-43]} {Dmel: FBgn0036760, CG5567, [RH, Score=132, Expect=4e-36]} {Celegans: WBGene00016892, C53A3.2, [RH, Score=160, Expect=1e-46]} {Smed: dd_Smed_v6_11063_0_1, dd_Smed_v6_11063_0_1, [RH, Score=176, Expect=2e-53]} {RNA1509_23273} {RNA1310_30232} {RNA815_13107.1}
3.	MligTC455_37287	2255	46.99	Mlig455_059849	Neo: Int S/G2/M Age: - Region-enriched R5: 1.244/0.00011	BANF1	0.96	-	-	-	0.960	-	-	Mlig455_059849 {REF} {Length: 855} {TRANSSPLICED} {Pfam: Barrier to autointegration factor [PF02961.16, score=141.3]; IMS family HHH motif [PF11798.10, score=24.4]} {Human: ENSG00000175334, BANF1, barrier to autointegration factor 1, [RH, Score=129, Expect=3e-40]} {Mouse: ENSMUSG00000024844, Banf1, barrier to autointegration factor 1, [RH, Score=127, Expect=1e-39]} {Dmel: FBgn0031977, baf, barrier to autointegration factor, [RH, Score=122, Expect=7e-38]} {Celegans: WBGene00000235, baf-1, Barrier-to-autointegration factor 1, [RH, Score=104, Expect=4e-31]} {Smed: dd_Smed_v6_3123_0_1, dd_Smed_v6_3123_0_1, [RH, Score=132, Expect=3e-42]} {RNA1509_15688, RNA1509_29890, RNA1509_9203} {RNA1310_41208, RNA1509_15688, RNA1509_29890, RNA1509_9203} {RNA1509_15688, RNA1509_29890, RNA1509_9203, RNA815_19901}
4.	MligTC455_36806	209	4.35	Mlig455_031276	Neo: - Age: -	FLII	0.953	-	-	-	-	-	0.953	Mlig455_031276 {REF} {Length: 4895} {TRANSSPLICED} {Pfam: Gelsolin repeat [PF00626.24, score=152.4]; Leucine rich repeat [PF13855.8, score=140.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=87.0]; Leucine Rich Repeat [PF00560.35, score=27.8]; Leucine-rich repeat [PF14580.8, score=18.3]} {Human: ENSG00000284571, FLII, FLII, actin remodeling protein, [RH, Score=911, Expect=0.0]; ENSG00000177731, FLII, FLII, actin remodeling protein, [RH, Score=911, Expect=0.0]} {Mouse: ENSMUSG00000002812, Flii, flightless I actin binding protein, [RH, Score=902, Expect=0.0]} {Dmel: FBgn0000709, fliI, flightless I, [RH, Score=904, Expect=0.0]} {Celegans: WBGene00001443, fli-1, Protein flightless-1 homolog, [RH, Score=809, Expect=0.0]} {Smed: dd_Smed_v6_1781_0_1, dd_Smed_v6_1781_0_1, [RH, Score=893, Expect=0.0]} {RNA1509_3534} {RNA1310_2222.1, RNA1509_3534} {RNA1509_3534, RNA815_3661}
5.	MligTC455_44066	21	0.44	Mlig455_026682	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_026682 {REF} {Length: 1013} {NoTransDecoderORF} {RNA1509_29859} {RNA1310_16397} {RNA815_4168}

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