TomoSeq data search

Data search

Results for MligTC455_43074

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43074	141	2.93	Mlig455_061807	Neo: - Age: -		Mlig455_061807 {REF} {Length: 3012} {TRANSSPLICED} {RNA1509_19799} {RNA1310_17073} {RNA815_3355.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_43074

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.613	2.325	0.50699	1.00000
RegionR2	-0.496	2.325	0.95729	1.00000
RegionR3	0.287	2.325	0.72872	1.00000
RegionR4	2.137	2.325	0.02889	0.13223
RegionR5	1.187	2.325	0.13383	0.37317
RegionR6	-0.552	2.325	0.96258	1.00000
RegionR7	1.007	2.325	0.36183	0.99764
RegionR8	0.044	2.325	0.85739	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.816	2.325	0.99995	1.00000
RegenerationR2	-0.012	2.325	0.98238	1.00000
RegenerationR3	-0.527	2.325	0.41723	0.81308
RegenerationR4	-0.655	2.325	0.33350	0.76725
RegenerationR5	-0.106	2.325	0.83557	0.99948
RegenerationR6	0.526	2.325	0.49127	0.79994
RegenerationBL	0.67	2.325	0.43807	0.80544
RegenerationTP	-0.702	2.325	0.49355	0.89759

Genes with expression patterns similar to MligTC455_43074

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43074	141	2.93	Mlig455_061807	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_061807 {REF} {Length: 3012} {TRANSSPLICED} {RNA1509_19799} {RNA1310_17073} {RNA815_3355.1}
2.	MligTC455_46813	452	9.42	Mlig455_030644, Mlig455_030997	Neo: Int S/G2/M Age: -	RNF113A	0.962	-	-	-	-	-	0.962	Mlig455_030644 {REF} {Length: 2049} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=39.8]; Zinc finger domain [PF18345.3, score=30.1]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.6]; CCCH-type zinc finger [PF18044.3, score=23.2]; RING-type zinc-finger [PF13445.8, score=18.9]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [Score=203, Expect=2e-62]} {Mouse: ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [Score=201, Expect=5e-62]; ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [Score=201, Expect=4e-62]} {Dmel: FBgn0038772, mdlc, midlife crisis, [Score=188, Expect=7e-57]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [Score=177, Expect=2e-52]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [Score=151, Expect=2e-43]} {RNA1509_30203} {RNA1310_32557.1} {RNA815_12935} Mlig455_030997 {REF} {Length: 3540} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=40.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=33.1]; zinc-RING finger domain [PF14634.8, score=30.7]; Zinc finger domain [PF18345.3, score=30.3]; RING-type zinc-finger [PF13445.8, score=29.7]; Ring finger domain [PF13639.8, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.5]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=22.5]; CCCH-type zinc finger [PF18044.3, score=22.5]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [RH, Score=228, Expect=2e-72]; ENSG00000139797, RNF113B, ring finger protein 113B, [RH, Score=217, Expect=1e-68]} {Mouse: ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [RH, Score=229, Expect=4e-73]; ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [RH, Score=226, Expect=3e-72]} {Dmel: FBgn0038772, mdlc, midlife crisis, [RH, Score=212, Expect=2e-66]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [RH, Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [RH, Score=172, Expect=5e-52]} {RNA1509_30203} {RNA1310_32557.1, RNA1509_30203} {RNA1509_30203, RNA815_12935}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43074

141

2.93

Mlig455_061807

Neo: -

Age: -

1.000

Mlig455_061807 {REF} {Length: 3012} {TRANSSPLICED} {RNA1509_19799} {RNA1310_17073} {RNA815_3355.1}

MligTC455_46813

452

9.42

Mlig455_030644, Mlig455_030997

Neo: Int S/G2/M

Age: -

RNF113A

0.962

Mlig455_030644 {REF} {Length: 2049} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=39.8]; Zinc finger domain [PF18345.3, score=30.1]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.6]; CCCH-type zinc finger [PF18044.3, score=23.2]; RING-type zinc-finger [PF13445.8, score=18.9]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [Score=203, Expect=2e-62]} {Mouse: ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [Score=201, Expect=5e-62]; ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [Score=201, Expect=4e-62]} {Dmel: FBgn0038772, mdlc, midlife crisis, [Score=188, Expect=7e-57]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [Score=177, Expect=2e-52]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [Score=151, Expect=2e-43]} {RNA1509_30203} {RNA1310_32557.1} {RNA815_12935}

Mlig455_030997 {REF} {Length: 3540} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=40.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=33.1]; zinc-RING finger domain [PF14634.8, score=30.7]; Zinc finger domain [PF18345.3, score=30.3]; RING-type zinc-finger [PF13445.8, score=29.7]; Ring finger domain [PF13639.8, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.5]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=22.5]; CCCH-type zinc finger [PF18044.3, score=22.5]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [RH, Score=228, Expect=2e-72]; ENSG00000139797, RNF113B, ring finger protein 113B, [RH, Score=217, Expect=1e-68]} {Mouse: ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [RH, Score=229, Expect=4e-73]; ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [RH, Score=226, Expect=3e-72]} {Dmel: FBgn0038772, mdlc, midlife crisis, [RH, Score=212, Expect=2e-66]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [RH, Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [RH, Score=172, Expect=5e-52]} {RNA1509_30203} {RNA1310_32557.1, RNA1509_30203} {RNA1509_30203, RNA815_12935}