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Results for MligTC455_46813

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46813 452 9.42 Mlig455_030644, Mlig455_030997

Neo: Int S/G2/M

Age: -

RNF113A

Mlig455_030644 {REF} {Length: 2049} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=39.8]; Zinc finger domain [PF18345.3, score=30.1]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.6]; CCCH-type zinc finger [PF18044.3, score=23.2]; RING-type zinc-finger [PF13445.8, score=18.9]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [Score=203, Expect=2e-62]} {Mouse: ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [Score=201, Expect=5e-62]; ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [Score=201, Expect=4e-62]} {Dmel: FBgn0038772, mdlc, midlife crisis, [Score=188, Expect=7e-57]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [Score=177, Expect=2e-52]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [Score=151, Expect=2e-43]} {RNA1509_30203} {RNA1310_32557.1} {RNA815_12935}

Mlig455_030997 {REF} {Length: 3540} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=40.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=33.1]; zinc-RING finger domain [PF14634.8, score=30.7]; Zinc finger domain [PF18345.3, score=30.3]; RING-type zinc-finger [PF13445.8, score=29.7]; Ring finger domain [PF13639.8, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.5]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=22.5]; CCCH-type zinc finger [PF18044.3, score=22.5]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [RH, Score=228, Expect=2e-72]; ENSG00000139797, RNF113B, ring finger protein 113B, [RH, Score=217, Expect=1e-68]} {Mouse: ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [RH, Score=229, Expect=4e-73]; ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [RH, Score=226, Expect=3e-72]} {Dmel: FBgn0038772, mdlc, midlife crisis, [RH, Score=212, Expect=2e-66]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [RH, Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [RH, Score=172, Expect=5e-52]} {RNA1509_30203} {RNA1310_32557.1, RNA1509_30203} {RNA1509_30203, RNA815_12935}

Cumulative graph for MligTC455_46813

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.51 3.778 0.72488 1.00000
RegionR2 1.087 3.778 0.13072 0.44856
RegionR3 0.183 3.778 0.74153 1.00000
RegionR4 -0.429 3.778 0.57442 0.89197
RegionR5 0.477 3.778 0.30269 0.63859
RegionR6 -0.107 3.778 0.84560 1.00000
RegionR7 -2.137 3.778 0.02699 0.30920
RegionR8 1.437 3.778 0.05243 0.44655

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.019 3.778 0.36386 1.00000
RegenerationR2 0.248 3.778 0.67096 0.94579
RegenerationR3 0.171 3.778 0.80298 0.98343
RegenerationR4 0.386 3.778 0.59862 0.91280
RegenerationR5 -0.14 3.778 0.82633 0.99637
RegenerationR6 0.579 3.778 0.38355 0.72397
RegenerationBL 1.455 3.778 0.06591 0.29909
RegenerationTP -0.004 3.778 0.99994 1.00000


Genes with expression patterns similar to MligTC455_46813

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46813 452 9.42 Mlig455_030644, Mlig455_030997

Neo: Int S/G2/M

Age: -

RNF113A 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_030644 {REF} {Length: 2049} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=39.8]; Zinc finger domain [PF18345.3, score=30.1]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.6]; CCCH-type zinc finger [PF18044.3, score=23.2]; RING-type zinc-finger [PF13445.8, score=18.9]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [Score=203, Expect=2e-62]} {Mouse: ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [Score=201, Expect=5e-62]; ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [Score=201, Expect=4e-62]} {Dmel: FBgn0038772, mdlc, midlife crisis, [Score=188, Expect=7e-57]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [Score=177, Expect=2e-52]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [Score=151, Expect=2e-43]} {RNA1509_30203} {RNA1310_32557.1} {RNA815_12935}

Mlig455_030997 {REF} {Length: 3540} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=40.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=33.1]; zinc-RING finger domain [PF14634.8, score=30.7]; Zinc finger domain [PF18345.3, score=30.3]; RING-type zinc-finger [PF13445.8, score=29.7]; Ring finger domain [PF13639.8, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.5]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=22.5]; CCCH-type zinc finger [PF18044.3, score=22.5]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [RH, Score=228, Expect=2e-72]; ENSG00000139797, RNF113B, ring finger protein 113B, [RH, Score=217, Expect=1e-68]} {Mouse: ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [RH, Score=229, Expect=4e-73]; ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [RH, Score=226, Expect=3e-72]} {Dmel: FBgn0038772, mdlc, midlife crisis, [RH, Score=212, Expect=2e-66]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [RH, Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [RH, Score=172, Expect=5e-52]} {RNA1509_30203} {RNA1310_32557.1, RNA1509_30203} {RNA1509_30203, RNA815_12935}
2. MligTC455_42726 280 5.84 Mlig455_028160

Neo: -

Age: -

VPS54 2.401 0.738 - 0.955 - - 0.708 Mlig455_028160 {REF} {Length: 5842} {TRANSSPLICED} {Pfam: Vps54-like protein [PF07928.14, score=120.4]; Vacuolar-sorting protein 54, of GARP complex [PF10475.11, score=58.7]} {Human: ENSG00000143952, VPS54, VPS54, GARP complex subunit, [RH, Score=271, Expect=2e-77]} {Mouse: ENSMUSG00000020128, Vps54, VPS54 GARP complex subunit, [RH, Score=268, Expect=1e-76]} {Dmel: FBgn0011232, scat, scattered, [RH, Score=412, Expect=1e-128]} {Celegans: WBGene00006934, vps-54, Vacuolar protein sorting-associated protein 54, [RH, Score=174, Expect=4e-44]} {Smed: dd_Smed_v6_10319_0_1, dd_Smed_v6_10319_0_1, [RH, Score=432, Expect=1e-135]} {RNA1509_9367} {RNA1310_5688.1, RNA1509_9367} {RNA1509_9367, RNA815_15154}
3. MligTC455_39738 74 1.54 Mlig455_025353

Neo: -

Age: -

TBC1D13 1.704 - - 0.950 - - 0.754 Mlig455_025353 {REF} {Length: 2893} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=88.5]} {Human: ENSG00000107021, TBC1D13, TBC1 domain family member 13, [Score=353, Expect=3e-119]} {Mouse: ENSMUSG00000039678, Tbc1d13, TBC1 domain family, member 13, [Score=355, Expect=3e-120]} {Dmel: FBgn0035916, GAPsec, GTPase activating protein, SECIS-dependent read-through, [Score=335, Expect=3e-112]} {Celegans: WBGene00009726, tbc-13, TBC (Tre-2/Bub2/Cdc16) domain family, [Score=272, Expect=3e-87]} {Smed: dd_Smed_v6_7072_0_2, dd_Smed_v6_7072_0_2, [Score=291, Expect=2e-95]} {RNA1509_17488} {RNA1310_19061.1} {RNA815_14426}
4. MligTC455_43074 141 2.93 Mlig455_061807

Neo: -

Age: -

0.962 - - - - - 0.962 Mlig455_061807 {REF} {Length: 3012} {TRANSSPLICED} {RNA1509_19799} {RNA1310_17073} {RNA815_3355.1}
5. MligTC455_44823 63 1.31 Mlig455_036159

Neo: -

Age: Down-Down-Down

0.96 - - - - - 0.960 Mlig455_036159 {REF} {Length: 2365} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=290.8]; Sulfotransferase family [PF13469.8, score=46.8]} {Smed: dd_Smed_v6_1356_0_1, dd_Smed_v6_1356_0_1, [Score=144, Expect=4e-41]} {RNA1509_27300} {RNA1310_17329} {RNA815_3006}
6. MligTC455_48768 182 3.78 Mlig455_028541

Neo: -

Age: Up-Down-Down

SEC24A 0.953 - - 0.953 - - - Mlig455_028541 {REF} {Length: 4842} {TRANSSPLICED} {Pfam: Sec23/Sec24 trunk domain [PF04811.17, score=117.5]; Sec23/Sec24 helical domain [PF04815.17, score=54.8]; Sec23/Sec24 beta-sandwich domain [PF08033.14, score=53.6]; Sec23/Sec24 zinc finger [PF04810.17, score=49.8]} {Human: ENSG00000113615, SEC24A, SEC24 homolog A, COPII coat complex component, [Score=556, Expect=1e-180]; ENSG00000138802, SEC24B, SEC24 homolog B, COPII coat complex component, [Score=549, Expect=3e-176]} {Mouse: ENSMUSG00000036391, Sec24a, Sec24 related gene family, member A (S. cerevisiae), [Score=549, Expect=2e-178]; ENSMUSG00000001052, Sec24b, Sec24 related gene family, member B (S. cerevisiae), [Score=530, Expect=2e-169]} {Dmel: FBgn0033460, Sec24AB, Secretory 24AB, [Score=503, Expect=2e-160]} {Celegans: WBGene00004756, sec-24.2, Yeast SEC homolog, [Score=494, Expect=1e-158]} {Smed: dd_Smed_v6_3760_0_1, dd_Smed_v6_3760_0_1, [Score=489, Expect=8e-158]} {RNA1509_35779} {RNA1310_9489.1} {RNA815_10954}
7. MligTC455_10321 235 4.89 Mlig455_004945, Mlig455_035629, Mlig455_055310

Neo: -

Age: -

0.952 - - - 0.952 - -

Mlig455_004945 {REF} {Length: 80} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363}

Mlig455_035629 {REF} {Length: 143} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363}

Mlig455_055310 {REF} {Length: 2978} {RNA1509_52583} {RNA1310_43983.1} {RNA815_13363}
8. MligTC455_48562 1243 25.89 Mlig455_004567, Mlig455_004585, Mlig455_064762

Neo: Int S/G2/M

Age: Up-Down-Up, logFC(26M/2M)=0.302

Region-enriched R5: 1.013/0.02060

BCL7A 0.951 - - 0.951 - - -

Mlig455_004567 {REF} {Length: 3193} {Pfam: BCL7, N-terminal conserver region [PF04714.15, score=77.4]} {Human: ENSG00000282873, BCL7A, BCL tumor suppressor 7A, [RH, Score=80.5, Expect=5e-18]; ENSG00000110987, BCL7A, BCL tumor suppressor 7A, [RH, Score=80.5, Expect=5e-18]; ENSG00000099385, BCL7C, BCL tumor suppressor 7C, [RH, Score=78.2, Expect=4e-17]; ENSG00000106635, BCL7B, BCL tumor suppressor 7B, [RH, Score=77.0, Expect=8e-17]} {Mouse: ENSMUSG00000029438, Bcl7a, B cell CLL/lymphoma 7A, [RH, Score=80.9, Expect=2e-18]; ENSMUSG00000030814, Bcl7c, B cell CLL/lymphoma 7C, [RH, Score=78.6, Expect=2e-17]; ENSMUSG00000029681, Bcl7b, B cell CLL/lymphoma 7B, [RH, Score=77.0, Expect=6e-17]} {Dmel: FBgn0026149, BCL7-like, [RH, Score=73.2, Expect=4e-16]} {Celegans: WBGene00016192, bcl-7, BCL7-like protein, [RH, Score=72.0, Expect=7e-16]} {Smed: dd_Smed_v6_4127_0_1, dd_Smed_v6_4127_0_1, [RH, Score=82.4, Expect=2e-19]} {RNA1509_28085, RNA1509_37594} {RNA1310_38455.1, RNA1509_28085, RNA1509_37594} {RNA1509_28085, RNA1509_37594, RNA815_19126}

Mlig455_004585 {REF} {Length: 3250} {Pfam: BCL7, N-terminal conserver region [PF04714.15, score=32.2]} {RNA1509_37594} {RNA1310_51624} {RNA815_19126}

Mlig455_064762 {REF} {Length: 3141} {Pfam: BCL7, N-terminal conserver region [PF04714.15, score=32.2]} {RNA1509_37594} {RNA1310_51624} {RNA815_19126}
9. MligTC455_48769 190 3.96 Mlig455_064731

Neo: -

Age: -

SEC24A 0.951 - - 0.951 - - - Mlig455_064731 {REF} {Length: 3017} {Pfam: Sec23/Sec24 trunk domain [PF04811.17, score=118.2]; Sec23/Sec24 beta-sandwich domain [PF08033.14, score=54.8]; Sec23/Sec24 helical domain [PF04815.17, score=48.6]} {Human: ENSG00000113615, SEC24A, SEC24 homolog A, COPII coat complex component, [Score=416, Expect=1e-132]; ENSG00000138802, SEC24B, SEC24 homolog B, COPII coat complex component, [Score=407, Expect=3e-128]} {Mouse: ENSMUSG00000036391, Sec24a, Sec24 related gene family, member A (S. cerevisiae), [Score=408, Expect=5e-130]} {Dmel: FBgn0033460, Sec24AB, Secretory 24AB, [Score=363, Expect=1e-112]} {Celegans: WBGene00004756, sec-24.2, Yeast SEC homolog, [Score=374, Expect=5e-118]} {Smed: dd_Smed_v6_3760_0_1, dd_Smed_v6_3760_0_1, [Score=377, Expect=5e-120]} {RNA1509_35779} {RNA1310_18341} {RNA815_10954}

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