TomoSeq data search

Data search

Results for MligTC455_43107

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43107

182

3.78

Mlig455_023855

Neo: -

Age: -

TSPAN33

Mlig455_023855 {REF} {Length: 2181} {Pfam: Tetraspanin family [PF00335.22, score=99.9]} {Human: ENSG00000158457, TSPAN33, tetraspanin 33, [Score=90.1, Expect=3e-20]} {Mouse: ENSMUSG00000001763, Tspan33, tetraspanin 33, [Score=91.7, Expect=6e-21]} {Celegans: WBGene00006640, tsp-14, Tetraspanin, [Score=68.2, Expect=1e-12]} {RNA1509_53496} {RNA1310_26143} {RNA815_9768}

Cumulative graph for MligTC455_43107

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.109	2.48	0.94628	1.00000
RegionR2	-0.309	2.48	0.62726	0.96858
RegionR3	-0.602	2.48	0.26934	0.81403
RegionR4	0.555	2.48	0.34897	0.67037
RegionR5	-0.558	2.48	0.26727	0.59092
RegionR6	0.4	2.48	0.42917	0.99330
RegionR7	0.338	2.48	0.62352	1.00000
RegionR8	0.068	2.48	0.94054	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.855	2.48	0.25629	0.96756
RegenerationR2	-0.023	2.48	0.96104	1.00000
RegenerationR3	0.228	2.48	0.68893	0.94386
RegenerationR4	-0.996	2.48	0.08184	0.45217
RegenerationR5	0.285	2.48	0.57987	0.90040
RegenerationR6	-0.631	2.48	0.26475	0.61471
RegenerationBL	-0.523	2.48	0.49357	0.85850
RegenerationTP	-1.684	2.48	0.08136	0.45301

Genes with expression patterns similar to MligTC455_43107

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43107	182	3.78	Mlig455_023855	Neo: - Age: -	TSPAN33	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023855 {REF} {Length: 2181} {Pfam: Tetraspanin family [PF00335.22, score=99.9]} {Human: ENSG00000158457, TSPAN33, tetraspanin 33, [Score=90.1, Expect=3e-20]} {Mouse: ENSMUSG00000001763, Tspan33, tetraspanin 33, [Score=91.7, Expect=6e-21]} {Celegans: WBGene00006640, tsp-14, Tetraspanin, [Score=68.2, Expect=1e-12]} {RNA1509_53496} {RNA1310_26143} {RNA815_9768}
2.	MligTC455_18743	847	17.64	Mlig455_048880, Mlig455_048889	Neo: - Age: Down-Up-Down Region-enriched R4: 1.254/0.03765	TMEM86A	1.737	-	-	-	-	0.960	0.777	Mlig455_048880 {REF} {Length: 2206} {TRANSSPLICED} {Pfam: YhhN family [PF07947.16, score=126.3]} {Human: ENSG00000151117, TMEM86A, transmembrane protein 86A, [Score=133, Expect=6e-38]} {Mouse: ENSMUSG00000010307, Tmem86a, transmembrane protein 86A, [Score=125, Expect=6e-35]} {Dmel: FBgn0039681, CG7582, [Score=102, Expect=5e-26]} {Smed: dd_Smed_v6_5848_0_1, dd_Smed_v6_5848_0_1, [RH, Score=102, Expect=2e-26]} {RNA1509_53906} {RNA1310_7199.1} {RNA815_6532} Mlig455_048889 {REF} {Length: 2206} {TRANSSPLICED} {Pfam: YhhN family [PF07947.16, score=126.3]} {Human: ENSG00000151117, TMEM86A, transmembrane protein 86A, [Score=133, Expect=6e-38]} {Mouse: ENSMUSG00000010307, Tmem86a, transmembrane protein 86A, [Score=125, Expect=6e-35]} {Dmel: FBgn0039681, CG7582, [Score=102, Expect=5e-26]} {Smed: dd_Smed_v6_5848_0_1, dd_Smed_v6_5848_0_1, [RH, Score=102, Expect=2e-26]} {RNA1509_21591, RNA1509_53906} {RNA1310_7199.1, RNA1509_21591, RNA1509_53906} {RNA1509_21591, RNA1509_53906, RNA815_6532}
3.	MligTC455_30581	205	4.27	Mlig455_039964	Neo: - Age: -	GABPB1	0.97	-	-	-	-	0.970	-	Mlig455_039964 {REF} {Length: 2065} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=37.8]; Ankyrin repeat [PF13606.8, score=34.0]; Ankyrin repeats (many copies) [PF13637.8, score=34.0]; Ankyrin repeats (many copies) [PF13857.8, score=33.3]; Ankyrin repeat [PF00023.32, score=25.0]} {Human: ENSG00000104064, GABPB1, GA binding protein transcription factor subunit beta 1, [Score=57.0, Expect=8e-10]} {Mouse: ENSMUSG00000027361, Gabpb1, GA repeat binding protein, beta 1, [Score=55.8, Expect=9e-10]; ENSMUSG00000038766, Gabpb2, GA repeat binding protein, beta 2, [Score=54.3, Expect=1e-09]} {Dmel: FBgn0086898, dgo, diego, [Score=50.1, Expect=1e-07]} {Smed: dd_Smed_v6_10116_0_2, dd_Smed_v6_10116_0_2, [Score=45.8, Expect=2e-06]} {RNA1509_27731} {RNA1310_10050} {RNA815_9449.1}
4.	MligTC455_34929	641	13.36	Mlig455_062707	Neo: - Age: -	FBXL4	0.962	-	-	-	-	0.962	-	Mlig455_062707 {REF} {Length: 2502} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=38.0]; F-box-like [PF12937.9, score=28.9]; Leucine Rich repeat [PF13516.8, score=27.6]; F-box domain [PF00646.35, score=22.1]} {Human: ENSG00000112234, FBXL4, F-box and leucine rich repeat protein 4, [Score=265, Expect=1e-80]} {Mouse: ENSMUSG00000040410, Fbxl4, F-box and leucine-rich repeat protein 4, [Score=275, Expect=1e-84]} {Dmel: FBgn0030555, Fbxl4, F box and leucine-rich-repeat gene 4, [Score=211, Expect=2e-60]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=55.1, Expect=7e-08]} {Smed: dd_Smed_v6_9358_0_1, dd_Smed_v6_9358_0_1, [Score=201, Expect=7e-58]} {RNA1509_8389} {RNA1310_13931.2} {RNA815_5025}
5.	MligTC455_25918	510	10.62	Mlig455_006533, Mlig455_006699	Neo: - Age: Down-Up-Down		0.953	-	-	-	-	0.953	-	Mlig455_006533 {REF} {Length: 3296} {Pfam: NHL repeat [PF01436.23, score=26.2]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=1e-06]} {RNA1509_12380} {RNA1310_21840.1} {RNA815_17174} Mlig455_006699 {REF} {Length: 658} {NoTransDecoderORF} {RNA1509_42918} {RNA1310_29427} {RNA815_19755}
6.	MligTC455_38612	96	2	Mlig455_061544	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.500		0.952	-	-	-	-	0.952	-	Mlig455_061544 {REF} {Length: 2271} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=23.2]; Ankyrin repeats (many copies) [PF13637.8, score=21.7]} {RNA1509_56131} {RNA1310_20466} {RNA815_16867}
7.	MligTC455_14387	463	9.64	Mlig455_022195	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_022195 {REF} {Length: 2088} {NoTransDecoderORF} {RNA1509_22930} {RNA1310_28859} {RNA815_13691}

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