Data search


search
Exact
Search

Results for MligTC455_43148

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43148 2114 44.05 Mlig455_001793

Neo: Int S/G2/M

Age: -

ZC3H15 Mlig455_001793 {REF} {Length: 2395} {Pfam: DRG Family Regulatory Proteins, Tma46 [PF16543.7, score=79.0]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=34.0]; Zinc finger domain [PF18345.3, score=32.6]; Torus domain [PF16131.7, score=31.3]; CCCH-type zinc finger [PF18044.3, score=31.3]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=26.8]; Zinc-finger containing family [PF15663.7, score=22.5]} {Human: ENSG00000065548, ZC3H15, zinc finger CCCH-type containing 15, [RH, Score=319, Expect=2e-105]} {Mouse: ENSMUSG00000027091, Zc3h15, zinc finger CCCH-type containing 15, [RH, Score=321, Expect=3e-106]} {Dmel: FBgn0033317, CG8635, [RH, Score=289, Expect=3e-94]} {Celegans: WBGene00009189, F27D4.4, Zinc finger CCCH domain-containing protein 15 homolog, [RH, Score=273, Expect=2e-88]} {Smed: dd_Smed_v6_4613_0_1, dd_Smed_v6_4613_0_1, [RH, Score=381, Expect=8e-131]} {RNA1509_15337, RNA1509_18411, RNA1509_22176, RNA1509_3141, RNA1509_54393} {RNA1310_9868.2, RNA1509_15337, RNA1509_18411, RNA1509_22176, RNA1509_3141, RNA1509_54393} {RNA1509_15337, RNA1509_18411, RNA1509_22176, RNA1509_3141, RNA1509_54393, RNA815_3342.1}

Cumulative graph for MligTC455_43148

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.885 5.603 0.15632 0.77495
RegionR2 0.049 5.603 0.85530 1.00000
RegionR3 0.107 5.603 0.62341 1.00000
RegionR4 -0.229 5.603 0.34706 0.66803
RegionR5 0.8 5.603 0.00002 0.00044
RegionR6 0.113 5.603 0.61493 1.00000
RegionR7 0.167 5.603 0.56098 1.00000
RegionR8 -0.123 5.603 0.74549 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.545 5.603 0.50580 1.00000
RegenerationR2 0.019 5.603 0.93178 1.00000
RegenerationR3 -0.094 5.603 0.69702 0.94677
RegenerationR4 0.219 5.603 0.35718 0.78621
RegenerationR5 -0.537 5.603 0.01296 0.19992
RegenerationR6 0.304 5.603 0.21313 0.55684
RegenerationBL -0.543 5.603 0.08933 0.35016
RegenerationTP 0.222 5.603 0.48267 0.88989


Genes with expression patterns similar to MligTC455_43148

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43148 2114 44.05 Mlig455_001793

Neo: Int S/G2/M

Age: -

ZC3H15 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_001793 {REF} {Length: 2395} {Pfam: DRG Family Regulatory Proteins, Tma46 [PF16543.7, score=79.0]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=34.0]; Zinc finger domain [PF18345.3, score=32.6]; Torus domain [PF16131.7, score=31.3]; CCCH-type zinc finger [PF18044.3, score=31.3]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=26.8]; Zinc-finger containing family [PF15663.7, score=22.5]} {Human: ENSG00000065548, ZC3H15, zinc finger CCCH-type containing 15, [RH, Score=319, Expect=2e-105]} {Mouse: ENSMUSG00000027091, Zc3h15, zinc finger CCCH-type containing 15, [RH, Score=321, Expect=3e-106]} {Dmel: FBgn0033317, CG8635, [RH, Score=289, Expect=3e-94]} {Celegans: WBGene00009189, F27D4.4, Zinc finger CCCH domain-containing protein 15 homolog, [RH, Score=273, Expect=2e-88]} {Smed: dd_Smed_v6_4613_0_1, dd_Smed_v6_4613_0_1, [RH, Score=381, Expect=8e-131]} {RNA1509_15337, RNA1509_18411, RNA1509_22176, RNA1509_3141, RNA1509_54393} {RNA1310_9868.2, RNA1509_15337, RNA1509_18411, RNA1509_22176, RNA1509_3141, RNA1509_54393} {RNA1509_15337, RNA1509_18411, RNA1509_22176, RNA1509_3141, RNA1509_54393, RNA815_3342.1}
2. MligTC455_52755 587 12.23 Mlig455_068155

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.784

PPP1R7 0.957 - - - - - 0.957 Mlig455_068155 {REF} {Length: 3236} {TRANSSPLICED} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=19.0]} {Human: ENSG00000115685, PPP1R7, protein phosphatase 1 regulatory subunit 7, [Score=69.3, Expect=4e-15]} {Mouse: ENSMUSG00000026275, Ppp1r7, protein phosphatase 1, regulatory subunit 7, [Score=70.9, Expect=8e-17]} {Dmel: FBgn0028992, sds22, [Score=58.9, Expect=2e-11]} {Celegans: WBGene00015516, C06A8.6, [Score=52.4, Expect=2e-09]} {Smed: dd_Smed_v6_5405_0_1, dd_Smed_v6_5405_0_1, [Score=78.2, Expect=8e-19]} {RNA1509_20641, RNA1509_7839} {RNA1310_12388.1, RNA1509_20641} {RNA1509_20641, RNA815_5565.1}
3. MligTC455_40016 3455 71.98 Mlig455_066108, Mlig455_068664

Neo: -

Age: logFC(26M/2M)=0.286

RAB2A 0.95 - - - - - 0.950

Mlig455_066108 {REF} {Length: 2568} {Pfam: Ras family [PF00071.24, score=209.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=47.7]; 50S ribosome-binding GTPase [PF01926.25, score=22.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.1]; RsgA GTPase [PF03193.18, score=18.8]} {Human: ENSG00000104388, RAB2A, RAB2A, member RAS oncogene family, [RH, Score=382, Expect=1e-136]; ENSG00000129472, RAB2B, RAB2B, member RAS oncogene family, [RH, Score=379, Expect=4e-135]} {Mouse: ENSMUSG00000047187, Rab2a, RAB2A, member RAS oncogene family, [RH, Score=384, Expect=2e-137]; ENSMUSG00000022159, Rab2b, RAB2B, member RAS oncogene family, [RH, Score=374, Expect=3e-133]} {Dmel: FBgn0014009, Rab2, [RH, Score=382, Expect=9e-137]} {Celegans: WBGene00006833, unc-108, Rab-2, [RH, Score=383, Expect=3e-137]} {Smed: dd_Smed_v6_1113_0_1, dd_Smed_v6_1113_0_1, [RH, Score=400, Expect=2e-144]} {RNA1509_20223} {RNA1310_20502, RNA1509_20223} {RNA1509_20223, RNA815_8592.1}

Mlig455_068664 {REF} {Length: 1692} {Pfam: Ras family [PF00071.24, score=209.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=47.7]; 50S ribosome-binding GTPase [PF01926.25, score=22.5]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.1]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.1]; RsgA GTPase [PF03193.18, score=18.8]} {Human: ENSG00000104388, RAB2A, RAB2A, member RAS oncogene family, [RH, Score=382, Expect=1e-136]; ENSG00000129472, RAB2B, RAB2B, member RAS oncogene family, [RH, Score=379, Expect=4e-135]} {Mouse: ENSMUSG00000047187, Rab2a, RAB2A, member RAS oncogene family, [RH, Score=384, Expect=2e-137]; ENSMUSG00000022159, Rab2b, RAB2B, member RAS oncogene family, [RH, Score=374, Expect=3e-133]} {Dmel: FBgn0014009, Rab2, [RH, Score=382, Expect=9e-137]} {Celegans: WBGene00006833, unc-108, Rab-2, [RH, Score=383, Expect=3e-137]} {Smed: dd_Smed_v6_1113_0_1, dd_Smed_v6_1113_0_1, [RH, Score=400, Expect=2e-144]} {RNA1509_20223, RNA1509_28866, RNA1509_34798} {RNA1310_20502, RNA1509_28866, RNA1509_34798} {RNA1509_28866, RNA1509_34798, RNA815_8592.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA