Data search
Results for MligTC455_43222
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43222 | 2743 | 57.14 | Mlig455_047173 | Neo: - Age: - |
RAC1 | Mlig455_047173 {REF} {Length: 1417} {Pfam: Ras family [PF00071.24, score=176.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.8]; ADP-ribosylation factor family [PF00025.23, score=36.6]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=308, Expect=5e-108]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=306, Expect=4e-107]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=301, Expect=3e-105]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=308, Expect=3e-108]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=304, Expect=2e-106]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=301, Expect=2e-105]} {Dmel: FBgn0010333, Rac1, [Score=306, Expect=2e-107]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=300, Expect=5e-105]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=287, Expect=2e-100]} {RNA1509_18908, RNA1509_44540, RNA1509_52952, RNA1509_56839, RNA1509_8926} {RNA1310_36739, RNA1509_18908, RNA1509_44540, RNA1509_52952, RNA1509_56839, RNA1509_8926} {RNA1509_18908, RNA1509_44540, RNA1509_52952, RNA1509_56839, RNA1509_8926, RNA815_17200} |
Cumulative graph for MligTC455_43222
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.626 | 6.022 | 0.05389 | 0.54223 | |
| RegionR2 | -0.317 | 6.022 | 0.52216 | 0.89608 | |
| RegionR3 | 0.091 | 6.022 | 0.82436 | 1.00000 | |
| RegionR4 | 1.031 | 6.022 | 0.03114 | 0.13954 | |
| RegionR5 | -0.117 | 6.022 | 0.77974 | 1.00000 | |
| RegionR6 | 0.515 | 6.022 | 0.20344 | 0.77718 | |
| RegionR7 | 0.614 | 6.022 | 0.13366 | 0.68773 | |
| RegionR8 | -0.19 | 6.022 | 0.69569 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.944 | 6.022 | 0.45157 | 1.00000 | |
| RegenerationR2 | -0.008 | 6.022 | 0.98627 | 1.00000 | |
| RegenerationR3 | -0.246 | 6.022 | 0.63895 | 0.92441 | |
| RegenerationR4 | -0.349 | 6.022 | 0.51485 | 0.87739 | |
| RegenerationR5 | 0.146 | 6.022 | 0.77688 | 0.98078 | |
| RegenerationR6 | -0.538 | 6.022 | 0.30285 | 0.65216 | |
| RegenerationBL | -1.059 | 6.022 | 0.03232 | 0.20141 | |
| RegenerationTP | 0.284 | 6.022 | 0.56144 | 0.93965 |
Genes with expression patterns similar to MligTC455_43222
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43222 | 2743 | 57.14 | Mlig455_047173 | Neo: - Age: - |
RAC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047173 {REF} {Length: 1417} {Pfam: Ras family [PF00071.24, score=176.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.8]; ADP-ribosylation factor family [PF00025.23, score=36.6]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=308, Expect=5e-108]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=306, Expect=4e-107]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=301, Expect=3e-105]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=308, Expect=3e-108]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=304, Expect=2e-106]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=301, Expect=2e-105]} {Dmel: FBgn0010333, Rac1, [Score=306, Expect=2e-107]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=300, Expect=5e-105]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=287, Expect=2e-100]} {RNA1509_18908, RNA1509_44540, RNA1509_52952, RNA1509_56839, RNA1509_8926} {RNA1310_36739, RNA1509_18908, RNA1509_44540, RNA1509_52952, RNA1509_56839, RNA1509_8926} {RNA1509_18908, RNA1509_44540, RNA1509_52952, RNA1509_56839, RNA1509_8926, RNA815_17200} |
| 2. | MligTC455_49430 | 1362 | 28.38 | Mlig455_041374 | Neo: - Age: - Region-enriched R5: 1.493/0.04187 Regeneration-upregulated TP: 2.859 Regeneration-enriched TP: 2.859 |
1.833 | - | - | - | 0.965 | 0.868 | - | Mlig455_041374 {REF} {Length: 1691} {Pfam: Basic region leucine zipper [PF07716.17, score=36.8]; Lactate racemase N-terminal domain [PF09861.11, score=18.5]} {RNA1509_8902} {RNA1310_20886, RNA1509_8902} {RNA1509_8902, RNA815_8401} | |
| 3. | MligTC455_33104 | 1679 | 34.97 | Mlig455_066382 | Neo: - Age: - |
GRINA | 1.768 | - | - | 0.818 | 0.950 | - | - | Mlig455_066382 {REF} {Length: 3198} {TRANSSPLICED} {Pfam: Inhibitor of apoptosis-promoting Bax1 [PF01027.22, score=104.0]} {Human: ENSG00000178719, GRINA, glutamate ionotropic receptor NMDA type subunit associated protein 1, [Score=197, Expect=2e-60]; ENSG00000135472, FAIM2, Fas apoptotic inhibitory molecule 2, [Score=192, Expect=5e-59]} {Mouse: ENSMUSG00000023011, Faim2, Fas apoptotic inhibitory molecule 2, [Score=193, Expect=6e-60]; ENSMUSG00000022564, Grina, glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding), [Score=189, Expect=1e-57]; ENSMUSG00000006301, Tmbim1, transmembrane BAX inhibitor motif containing 1, [Score=184, Expect=2e-56]} {Dmel: FBgn0013305, Nmda1, N-methyl-D-aspartate receptor-associated protein, [Score=184, Expect=1e-56]} {Celegans: WBGene00006470, tag-120, [Score=147, Expect=9e-43]} {Smed: dd_Smed_v6_1586_0_1, dd_Smed_v6_1586_0_1, [Score=218, Expect=1e-69]} {RNA1509_12403, RNA1509_28041, RNA1509_28808, RNA1509_29501, RNA1509_30524, RNA1509_48430} {RNA1310_21420, RNA1509_12403, RNA1509_28041, RNA1509_28808, RNA1509_29501, RNA1509_30524, RNA1509_48430} {RNA1509_12403, RNA1509_28041, RNA1509_28808, RNA1509_29501, RNA1509_30524, RNA1509_48430, RNA815_8061} |
| 4. | MligTC455_31012 | 19 | 0.4 | Mlig455_028966 | Neo: - Age: - |
0.975 | - | - | - | - | 0.975 | - | Mlig455_028966 {REF} {Length: 2007} {RNA1509_4697} {RNA1310_228} {RNA815_19009} | |
| 5. | MligTC455_30272 | 339 | 7.06 | Mlig455_003363, Mlig455_042254, Mlig455_062169 | Neo: - Age: Up-Up-Down |
0.97 | - | - | - | - | 0.970 | - | Mlig455_003363 {REF} {Length: 1628} {Celegans: WBGene00016348, C33E10.6, [RH, Score=272, Expect=9e-81]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=253, Expect=6e-77]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_042254 {REF} {Length: 322} {Celegans: WBGene00022511, ZC53.4, [Score=69.3, Expect=5e-15]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_062169 {REF} {Length: 1903} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.1]} {Celegans: WBGene00022511, ZC53.4, [RH, Score=281, Expect=5e-83]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=262, Expect=1e-79]} {RNA1509_19771, RNA1509_5039} {RNA1310_3396.1, RNA1509_19771} {RNA1509_19771, RNA815_1342.1} |
|
| 6. | MligTC455_08479 | 25 | 0.52 | Mlig455_069908 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_069908 {REF} {Length: 1165} {RNA1310_92371} {RNA815_51913} | |
| 7. | MligTC455_35069 | 6900 | 143.75 | Mlig455_025164, Mlig455_042303 | Neo: - |
C3orf30, CCDC86 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_025164 {REF} {Length: 875} {Human: ENSG00000163424, C3orf30, chromosome 3 open reading frame 30, [RH, Score=57.8, Expect=3e-09]} {RNA1310_138163} Mlig455_042303 {REF} {Length: 1262} {TRANSSPLICED} {Pfam: Cgr1 family [PF03879.16, score=59.0]} {Human: ENSG00000110104, CCDC86, coiled-coil domain containing 86, [RH, Score=63.5, Expect=2e-12]} {Mouse: ENSMUSG00000024732, Ccdc86, coiled-coil domain containing 86, [RH, Score=52.0, Expect=2e-08]} {Dmel: FBgn0031040, CG14210, [RH, Score=50.8, Expect=6e-09]} {Celegans: WBGene00012739, Y40B1B.7, [RH, Score=45.1, Expect=6e-07]} {RNA1509_12585, RNA1509_1666, RNA1509_2211, RNA1509_422, RNA1509_60130} {RNA1310_60254.1, RNA1509_12585, RNA1509_2211, RNA1509_422, RNA1509_60130} {RNA1509_12585, RNA1509_2211, RNA1509_422, RNA1509_60130, RNA815_18180.1} |
| 8. | MligTC455_16946 | 942 | 19.62 | Mlig455_043515 | Neo: - Age: logFC(26M/2M)=0.196 |
SLC30A3 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_043515 {REF} {Length: 2548} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=167.2]; Phosphate transporter family [PF01384.22, score=20.3]} {Human: ENSG00000115194, SLC30A3, solute carrier family 30 member 3, [Score=202, Expect=3e-62]} {Mouse: ENSMUSG00000028836, Slc30a2, solute carrier family 30 (zinc transporter), member 2, [Score=189, Expect=1e-55]} {Dmel: FBgn0028516, ZnT35C, Zinc transporter 35C, [Score=285, Expect=9e-92]} {Celegans: WBGene00011821, cdf-2, Cation Diffusion Facilitator family, [Score=148, Expect=1e-40]} {Smed: dd_Smed_v6_5007_0_1, dd_Smed_v6_5007_0_1, [Score=213, Expect=2e-66]} {RNA1509_44192, RNA1509_5122} {RNA1310_4451, RNA1509_44192, RNA1509_5122} {RNA1509_44192, RNA1509_5122, RNA815_1636.1} |
| 9. | MligTC455_27838 | 246 | 5.12 | Mlig455_060678 | Neo: - Age: Down-Down-Down Regeneration-upregulated TP: 4.727 Regeneration-enriched TP: 4.727 |
TRPM1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_060678 {REF} {Length: 14356} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=81.6]; Ankyrin repeats (3 copies) [PF12796.9, score=80.1]; Ankyrin repeats (many copies) [PF13857.8, score=39.8]; Ankyrin repeat [PF13606.8, score=39.5]; Ankyrin repeat [PF00023.32, score=34.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=6e-07]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=56.2, Expect=5e-07]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=56.2, Expect=4e-07]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=54.3, Expect=1e-06]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=55.8, Expect=4e-07]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=58.2, Expect=6e-08]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=97.1, Expect=4e-20]} {RNA1509_29189} {RNA1310_131.1} {RNA815_52.1} |
| 10. | MligTC455_26495 | 13521 | 281.68 | Mlig455_012448 | Neo: - Age: Down-Down-Up Region-enriched R3: 1.279/0.00682 |
0.957 | - | - | - | - | 0.957 | - | Mlig455_012448 {REF} {Length: 643} {TRANSSPLICED} {RNA1509_3044} {RNA1310_67854.1} {RNA815_3012.1} | |
| 11. | MligTC455_26496 | 40627 | 846.39 | Mlig455_012443, Mlig455_012445, Mlig455_012459 | Neo: - Age: - Region-enriched R3: 1.261/0.00716 |
0.957 | - | - | - | - | 0.957 | - | Mlig455_012443 {REF} {Length: 522} {TRANSSPLICED} {RNA1509_39210} {RNA1310_67854.1} {RNA815_3012.1} Mlig455_012445 {REF} {Length: 522} {TRANSSPLICED} {RNA1509_39210} {RNA1310_67854.1} {RNA815_3012.1} Mlig455_012459 {REF} {Length: 522} {TRANSSPLICED} {RNA1509_1204, RNA1509_16700, RNA1509_293, RNA1509_39210} {RNA1310_67854.1, RNA1509_1204, RNA1509_16700, RNA1509_293, RNA1509_39210} {RNA1509_1204, RNA1509_16700, RNA1509_293, RNA1509_39210, RNA815_3012.1} |
|
| 12. | MligTC455_26497 | 27028 | 563.09 | Mlig455_012441, Mlig455_012460 | Neo: - Age: - Region-enriched R3: 1.274/0.00647 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_012441 {REF} {Length: 645} {TRANSSPLICED} {RNA1509_3044} {RNA1310_67854.1} {RNA815_3012.1} Mlig455_012460 {REF} {Length: 527} {TRANSSPLICED} {RNA1509_882} {RNA1310_67854.1} {RNA815_3012.1} |
|
| 13. | MligTC455_27817 | 125 | 2.61 | Mlig455_024260 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_024260 {REF} {Length: 3633} {Pfam: Zinc knuckle [PF00098.25, score=21.3]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} | |
| 14. | MligTC455_32423 | 283 | 5.9 | Mlig455_055060 | Neo: Irradiation Age: Up-Down-Down |
0.955 | - | - | - | - | 0.955 | - | Mlig455_055060 {REF} {Length: 2866} {RNA1509_52975} {RNA1310_17621, RNA1509_52975} {RNA1509_52975, RNA815_10158} | |
| 15. | MligTC455_01787 | 80 | 1.67 | Mlig455_020815 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_020815 {REF} {Length: 1058} | |
| 16. | MligTC455_44019 | 9461 | 197.1 | Mlig455_048415, Mlig455_049057 | Neo: - Age: logFC(26M/2M)=-0.256 |
BANF1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_048415 {REF} {Length: 814} {TRANSSPLICED} {Pfam: Barrier to autointegration factor [PF02961.16, score=144.2]; IMS family HHH motif [PF11798.10, score=25.6]} {Human: ENSG00000175334, BANF1, barrier to autointegration factor 1, [RH, Score=134, Expect=4e-42]} {Mouse: ENSMUSG00000024844, Banf1, barrier to autointegration factor 1, [RH, Score=133, Expect=5e-42]} {Dmel: FBgn0031977, baf, barrier to autointegration factor, [RH, Score=124, Expect=1e-38]} {Celegans: WBGene00000235, baf-1, Barrier-to-autointegration factor 1, [Score=95.9, Expect=2e-27]} {Smed: dd_Smed_v6_3123_0_1, dd_Smed_v6_3123_0_1, [RH, Score=127, Expect=6e-40]} {RNA1509_3184} {RNA1310_42545, RNA1509_3184} {RNA1509_3184, RNA815_21487} Mlig455_049057 {REF} {Length: 814} {TRANSSPLICED} {Pfam: Barrier to autointegration factor [PF02961.16, score=144.8]; IMS family HHH motif [PF11798.10, score=25.3]} {Human: ENSG00000175334, BANF1, barrier to autointegration factor 1, [RH, Score=131, Expect=3e-41]} {Mouse: ENSMUSG00000024844, Banf1, barrier to autointegration factor 1, [RH, Score=130, Expect=4e-41]} {Dmel: FBgn0031977, baf, barrier to autointegration factor, [RH, Score=124, Expect=1e-38]} {Celegans: WBGene00000235, baf-1, Barrier-to-autointegration factor 1, [Score=95.5, Expect=2e-27]} {Smed: dd_Smed_v6_3123_0_1, dd_Smed_v6_3123_0_1, [RH, Score=127, Expect=7e-40]} {RNA1509_20472, RNA1509_26701, RNA1509_34501} {RNA1310_42545, RNA1509_20472, RNA1509_26701, RNA1509_34501} {RNA1509_20472, RNA1509_26701, RNA1509_34501, RNA815_21487} |
| 17. | MligTC455_10445 | 51 | 1.06 | Mlig455_023947 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_023947 {REF} {Length: 580} {NoTransDecoderORF} {RNA1509_32472} {RNA1310_25828} {RNA815_4805} | |
| 18. | MligTC455_31548 | 14 | 0.29 | Mlig455_049182 | Neo: - Age: Down-Down-Up |
0.95 | - | - | - | - | 0.950 | - | Mlig455_049182 {REF} {Length: 5859} {Pfam: Putative DNA-binding domain [PF04326.16, score=32.7]} {RNA1509_47755} {RNA1310_4459.1, RNA1509_47755} {RNA1509_47755, RNA815_3355.1} |
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